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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S233.g10336.01.t

Possible name(s)

C11orf54

Location

S233 [124,814 / 126,216]

Sequences

Amino acid sequence

Length: 313

>Harore.CG.MTP2014.S233.g10336.01.p
MCLLAHFAKPTNLSAAACSSKLDQKMSVKEIAKRTVPIENKDLYVPDLDELASVIQSGLQ
LNYKEAECTVVDCPDLTKAPYRLAAKGLCGNARLVAVAGAGSKYVAGVCCELIPNMVTSG
GDNTATDCSHICKVNTATNGAVLEKYNCSEFNMMCDLYCSEGKPGKVLCIKAKYRTGEDN
LVTCMRLAIEKFYGKEKAVGLGGSFLVKSGKLKTHVMPDFSETPLNTKEDVNNWLNFYTM
SAPFVCMSFFISHDPGLDLRLEHSHGYSIENSEGGHYHTDVTPEEVEYEGYYSIAEKIYR
VDRPEVTHMLGRE

Nucleotide sequence

Length: 942

>Harore.CG.MTP2014.S233.g10336.01.t
ATGTGCCTACTCGCTCATTTTGCAAAGCCTACAAACCTTTCCGCAGCAGCGTGTTCCAGC
AAGTTAGACCAGAAAATGTCAGTAAAAGAAATTGCCAAACGCACCGTGCCTATCGAAAAT
AAAGATTTATATGTTCCTGATCTGGATGAACTAGCATCAGTCATTCAAAGCGGTTTGCAG
TTAAACTACAAAGAGGCGGAATGCACTGTTGTCGATTGCCCCGATCTTACAAAAGCTCCC
TATCGTCTAGCAGCGAAGGGCCTTTGTGGAAATGCACGTTTAGTTGCTGTAGCTGGTGCT
GGATCGAAATATGTTGCCGGCGTCTGCTGCGAATTAATTCCCAACATGGTCACATCTGGG
GGAGACAACACCGCAACTGATTGCTCCCATATATGCAAAGTGAACACTGCCACAAACGGT
GCCGTATTGGAAAAGTACAATTGCTCTGAATTCAATATGATGTGCGACCTATACTGCTCT
GAAGGAAAACCTGGAAAGGTTTTGTGTATCAAAGCCAAGTACAGGACAGGTGAAGACAAC
CTTGTAACTTGCATGCGCCTTGCGATTGAAAAGTTTTACGGGAAGGAGAAAGCGGTAGGA
TTGGGAGGATCATTTTTGGTCAAAAGTGGCAAGCTGAAAACTCATGTGATGCCAGATTTC
TCAGAAACACCTTTGAATACGAAGGAGGATGTCAATAACTGGCTCAATTTTTATACAATG
AGTGCACCTTTCGTTTGCATGTCATTCTTTATTTCCCACGATCCGGGACTCGACTTGAGG
TTGGAGCATTCTCATGGGTACAGTATTGAGAACAGTGAAGGGGGTCACTATCACACTGAT
GTCACCCCGGAAGAAGTTGAATACGAAGGGTATTACTCTATAGCAGAGAAGATTTATAGG
GTGGATAGACCCGAAGTCACCCATATGCTTGGACGAGAATAA

InterProScan

PANTHER
DUF1907 (IPR015021) - T[38-99] 2.8E-107 - T[98-313] 2.8E-107
SMART
DUF1907 (IPR015021) - T[54-301] 1.6E-123
Pfam
DUF1907 (IPR015021) - T[95-301] 2.0E-76

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CK054_HUMAN 43.548 % 266 2.25E-88