- Transcript 'Harore.CG.MTP2014.S9...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S233.g12833.01.t
Possible name(s)
ADAMTS1; ADAMTS15; ADAMTS5
Gene model
Location
S233 [46,357 / 55,008]
Amino acid sequence
Length: 741
>Harore.CG.MTP2014.S233.g12833.01.p
MAEVGAMCSTKHSCAIVEDDGLSAAYTVAHEIGHVLNMMHDDNRLCRVNFAHINPDTHIM
SSTMNRVDNDQPWSLCSKEAITDFLESGRGSCMLDRPRDTKTYPTELPGEMYDVNAQCEM
SFGTGAKECPFMQECGRLWCHTTLGRNQCHTRHFPRADGSPCGRSLHCFQGKCVTVDQVR
VPKDGQWNIWGSFGTCSRSCDGGIQMSTRECNSPAPENGGKYCTGARLRFRSCNTDMCPF
KNRAAGPTDFRSEQCAAFNGQSFPLLGIKTVSTWIPKYTDIGQNDRCRLTCQSVQTGVFV
KLASKVTDGTKCGPNTTNICVQGICMNAGCDGILGSKTKFDRCGVCGGKNKRCKRVKGAY
KKRHSGYNNVVKIPEGAASVVITQRGYRNKLHDGNYLAIKDWNGRYILNGGLTLSTSQRD
ITINGTIIRYTGVSATTEKIEIAGKTRGELQIQVLSLEVGTKGRILPPRIKYVYYLSSTK
SSKVLRVIPNRDSVAIIQMLPDVLISFTFSNSLRNPQKETNLLVPRRRVKCLGLPGVGRN
ASQKPENVDLVGRFGESPVETKDGSQQLDANPELSHTTNCPAFYDARLPHPAYTVIAIRV
DAEIVDRPEVLPEADRSPPHHRCLSPDSAMDTRVKLCGSKDDGDTVQPHAEKASNIVMSH
VADRTDIYLASCNVKGKSHHRYMAVCLDHVEQTSRKQRKVQNEAVLFYVIAGAEKNGGAN
ILAMSINKLSLYSITALLNHM
Nucleotide sequence
Length: 2,376
>Harore.CG.MTP2014.S233.g12833.01.t
ATGGCTGAAGTAGGTGCTATGTGTTCCACTAAACACAGCTGTGCTATCGTTGAAGACGAC
GGACTGTCAGCAGCCTATACAGTAGCACACGAGATCGGCCACGTATTGAATATGATGCAC
GACGACAATCGTTTATGTCGCGTCAACTTTGCTCACATCAATCCCGACACTCATATCATG
AGCTCCACCATGAATCGCGTTGACAACGATCAACCATGGAGCCTATGTTCAAAAGAAGCT
ATCACCGATTTCCTAGAGAGCGGCCGCGGATCCTGCATGCTTGATAGACCGAGAGATACC
AAGACCTATCCTACAGAGCTACCCGGAGAAATGTATGACGTTAACGCACAGTGCGAAATG
TCCTTCGGAACAGGAGCGAAAGAGTGTCCTTTCATGCAAGAGTGTGGAAGACTTTGGTGC
CATACCACTTTGGGAAGGAATCAGTGTCACACTCGTCATTTCCCACGTGCAGATGGCTCC
CCTTGTGGAAGAAGTCTTCACTGCTTCCAAGGCAAATGTGTGACAGTAGATCAAGTAAGA
GTTCCGAAAGATGGCCAGTGGAACATATGGGGAAGTTTCGGTACTTGCTCAAGATCGTGC
GACGGTGGAATACAAATGTCCACTCGCGAATGCAATAGCCCCGCCCCAGAAAACGGTGGA
AAATATTGCACAGGCGCCCGACTTCGATTCCGCAGTTGCAATACGGACATGTGTCCGTTC
AAGAACAGAGCCGCCGGCCCGACCGACTTCCGTAGCGAACAATGCGCCGCGTTTAACGGT
CAGAGTTTCCCGCTTCTCGGAATCAAAACCGTTTCTACTTGGATCCCGAAATACACGGAC
ATCGGCCAAAACGATAGATGTAGGCTCACTTGCCAGTCCGTGCAGACCGGAGTTTTCGTT
AAGCTCGCCAGTAAAGTCACAGACGGAACGAAATGCGGACCTAACACGACCAATATCTGC
GTGCAAGGTATATGCATGAATGCTGGCTGTGACGGCATTCTCGGGTCCAAGACTAAATTT
GACAGATGTGGCGTGTGTGGTGGCAAGAACAAACGTTGCAAGAGAGTGAAAGGAGCTTAC
AAGAAACGTCATTCTGGGTACAACAACGTGGTAAAGATACCGGAAGGCGCTGCTTCAGTC
GTTATAACGCAACGTGGGTATAGGAACAAACTCCACGATGGCAACTACCTCGCCATAAAG
GATTGGAACGGACGATACATACTGAACGGCGGACTAACGTTGTCCACTTCGCAAAGAGAC
ATCACCATAAATGGAACGATCATTAGATACACTGGCGTAAGCGCAACCACGGAAAAGATC
GAAATTGCAGGCAAAACTCGTGGCGAACTTCAAATTCAAGTACTTTCTCTAGAAGTAGGA
ACCAAAGGACGCATACTGCCTCCTCGTATCAAATATGTCTACTACTTATCGTCTACAAAA
TCTAGCAAGGTATTAAGAGTTATCCCGAATAGAGACAGCGTGGCTATAATACAAATGCTG
CCAGACGTACTTATAAGTTTTACTTTTTCTAACAGCCTACGAAATCCACAAAAAGAAACA
AACCTGCTAGTCCCGAGAAGGCGGGTAAAGTGTCTTGGGTTACCGGGAGTTGGTCGAAAT
GCAAGCCAAAAGCCGGAAAATGTGGATCTGGTTGGAAGGTTCGGAGAGTCACCTGTAGAA
ACGAAAGACGGCAGTCAGCAACTGGATGCGAATCCAGAGTTAAGCCATACCACGAACTGC
CCTGCGTTCTACGATGCAAGACTCCCGCACCCAGCATATACGGTAATAGCAATACGGGTG
GACGCGGAAATAGTGGACCGTCCGGAGGTATTACCAGAAGCCGACCGAAGCCCCCCTCAT
CACCGGTGCTTATCTCCCGATTCGGCGATGGATACAAGGGTCAAGCTGTGTGGGTCGAAG
GACGATGGGGACACTGTTCAACCTCATGCGGAAAAGGCATCAAACATCGTCATGTCACAT
GTCGCAGACCGAACGGATATTTACTTGGCGAGTTGCAATGTCAAGGGAAAAAGCCATCAT
CGATACATGGCTGTATGCTTAGATCATGTTGAACAAACAAGTAGAAAGCAACGGAAAGTT
CAAAATGAAGCGGTGCTTTTCTACGTGATAGCAGGCGCTGAGAAAAATGGAGGAGCAAAT
ATATTGGCAATGAGCATCAACAAACTATCTCTTTACAGTATTACTGCACTACTGAACCAT
ATGTGAACAGTGAAATTCTCACTTATTGCCTGTCTTTACAGGATATCAGATGATAATCTG
AAGAGATTAAGCTGTCACAGGGTAGTAATAACCTCCTGCTTAACTTACTCCATTACCCTT
CACAAGTTGGGCGGACATACAGTTATTCTACAATAG
| ProSiteProfiles |
Peptidase_M12B (IPR001590) - T[1-97] 14.054 |
| Pfam |
Peptidase_M12B (IPR001590) - T[1-97] 2.8E-12 |
| Gene3D |
MetalloPept_cat_dom_sf (IPR024079) - T[1-116] 5.4E-37 |
| SMART |
ADAM_Cys-rich (IPR006586) - T[98-176] 1.7E-4 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[182-238] 1.2E-15 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[182-238] 3.4E-13 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[184-239] 12.885 |
| SMART |
TSP1_rpt (IPR000884) - T[187-239] 4.9E-12 |
| Pfam |
TSP1_rpt (IPR000884) - T[190-238] 2.3E-6 |
| Pfam |
ADAM_spacer1 (IPR010294) - T[355-475] 6.9E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ATS1_HUMAN | 44.91 % | 459 | 5.51E-149 |
| ATS15_HUMAN | 46.458 % | 484 | 4.96E-159 |
| ATS5_HUMAN | 42.653 % | 425 | 1.38E-136 |