Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'cima877614' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  4. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S238.g05953.02.t

Possible name(s)

DHCR7; LBR; TM7SF2

Gene model

Harore.CG.MTP2014.S238.g05953

Location

S238 [118,597 / 122,705]

Sequences

Amino acid sequence

Length: 487

>Harore.CG.MTP2014.S238.g05953.02.p
MAKHNDEDLDISTSNGTSALISKTAKITDGKKTMEAKEGAWGRAWEVDCKTYLGIALLLI
FCPFMPLYFYISCDTYGGSLIGPFISNSTQIESAFVKWANGIPDWSWDAVKIYAIWLSFQ
VVLAFAPDMLHYILPFYKGGVQEGAVTPAGKVNKYNINGLQAWLITHIFWFGNAFIFKLF
SPTIIFDYFGPLLWVVNIVGYLLAIFVYVKGHFFPTDRTDCKFSGNAAYDFVMGIEFNPR
ITRWFDFKLFFNGRPGIVAWTLINLSFAWHQLETYGYVSNSMILLNVLHGIYVLDFFWNE
TWYLKTLDICHDHFGWYLAWGDCVWLPYMYTLQGLYLAYNPVELHIAALVAILLLGLVGY
YVFRSANSQKDHFRRMREKSKIWGKSPEFIKCWYMSADGKRHNSALLTSGWWGVCRHGNY
TGDLLGCLAYCLCCGFSNLLPYFYVIYMVILLVHRIYRDEHRCRHKYGKFWEQYTEAVPY
RLIPRIY

Nucleotide sequence

Length: 1,723

>Harore.CG.MTP2014.S238.g05953.02.t
TAAGCTGTGAGTACTAGTTTACGAATATAGATTAGACACATGGCGAAGCATAATGATGAA
GATCTCGATATTTCGACCAGTAATGGCACCTCAGCGTTAATAAGCAAAACTGCAAAAATC
ACGGACGGCAAAAAGACCATGGAGGCTAAAGAAGGAGCTTGGGGTCGAGCGTGGGAAGTC
GACTGTAAAACCTATCTCGGTATCGCACTGTTACTTATCTTCTGTCCGTTCATGCCTCTC
TATTTCTACATCTCTTGCGATACCTATGGCGGTTCTCTTATTGGACCATTCATTAGCAAC
TCGACTCAAATCGAATCGGCGTTCGTGAAATGGGCAAATGGTATACCCGATTGGAGCTGG
GATGCGGTTAAGATATATGCAATATGGTTAAGTTTTCAGGTTGTGCTGGCATTTGCTCCA
GATATGCTTCATTACATATTACCATTCTACAAGGGTGGGGTTCAAGAAGGTGCTGTGACC
CCTGCTGGAAAGGTCAACAAGTACAACATAAACGGATTACAGGCCTGGTTGATTACACAC
ATTTTTTGGTTTGGGAACGCCTTCATTTTCAAACTTTTCTCTCCAACGATTATCTTTGAC
TACTTTGGTCCACTGCTTTGGGTTGTCAACATCGTCGGATATCTTTTAGCCATTTTCGTA
TACGTGAAAGGCCATTTCTTCCCGACCGACCGAACTGACTGTAAATTCAGCGGGAATGCG
GCTTACGACTTCGTGATGGGGATCGAATTCAACCCTCGTATCACCAGATGGTTTGACTTC
AAGTTGTTCTTTAACGGGAGACCTGGCATAGTGGCATGGACGTTGATCAATCTATCCTTT
GCTTGGCATCAATTGGAGACATACGGCTATGTATCTAATTCTATGATACTCCTGAACGTC
TTACACGGAATATATGTGTTAGATTTCTTTTGGAACGAGACCTGGTATCTCAAAACCTTG
GATATTTGCCATGATCATTTTGGATGGTACTTGGCTTGGGGCGATTGCGTGTGGTTGCCC
TATATGTACACTCTTCAAGGTCTTTACTTAGCTTATAATCCTGTGGAGCTGCATATTGCG
GCCTTGGTAGCGATTTTACTCCTGGGTTTGGTTGGATATTACGTTTTCAGATCAGCCAAT
TCGCAGAAGGACCACTTCCGACGAATGAGAGAGAAATCTAAAATATGGGGTAAATCTCCC
GAATTCATTAAGTGCTGGTACATGTCAGCTGACGGCAAGCGTCACAACAGCGCCCTGTTG
ACGTCAGGTTGGTGGGGTGTATGTCGTCACGGGAATTATACTGGTGACTTATTAGGGTGC
CTCGCCTACTGCCTGTGCTGTGGTTTTTCGAATCTACTTCCTTACTTCTACGTGATCTAC
ATGGTGATTCTTCTCGTCCATCGAATCTACCGCGACGAGCACCGATGCCGACACAAGTAC
GGGAAGTTCTGGGAGCAGTACACGGAGGCAGTTCCGTATCGACTCATTCCACGAATTTAC
TGACGATGGAAATTAGTACTAGTAAACTCACGTGAACTTTATATCTTTGTGAGAATTTAG
ATCATTAGAGTAATATTATTAGCGGCGTGATTTGATTTTTTATTAGGATAATAAGTTTCA
TCGATACTATATTGATATATAGTTGAATAAACTTCATTTCAGGCTTTTTCATCATATAAA
TAGTTATATAAGCAATGCAATGGAAAGCAATTTAGAAAGTAGC

InterProScan

Pfam
Ergosterol_biosynth_ERG4_ERG24 (IPR001171) - T[105-487] 4.6E-98
ProSitePatterns
Sterol_reductase_CS (IPR018083) - T[451-474] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DHCR7_HUMAN 60.47 % 569 0
ERG24_HUMAN 40.782 % 256 1.01E-80
LBR_HUMAN 38.701 % 260 4.5E-80