Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S238.g08207.02.t

Possible name(s)

QTRT1; QTRT2

Gene model

Harore.CG.MTP2014.S238.g08207

Location

S238 [111,899 / 112,463]

Sequences

Amino acid sequence

Length: 187

>Harore.CG.MTP2014.S238.g08207.02.p
MTLRDVHGFAVGGLSGGECKEDFWRMVTISTDGLPENKPRYLMGVGYTVDLIVCSALGCD
MFDCVYPTRTARFGSALILSGQINLKSSEFSKDFNPIDEECSCHTCRNYSRAHINVLFRN
NNPSACIMLTVHNIAYQAALMSAIRCSISKDNFPSFIKSKFEQLFKDPSFYPNWACDALL
SVGVNIK

Nucleotide sequence

Length: 564

>Harore.CG.MTP2014.S238.g08207.02.t
ATGACATTACGAGATGTCCATGGATTCGCAGTGGGAGGTTTGAGTGGTGGGGAATGTAAA
GAGGATTTTTGGAGAATGGTTACTATAAGCACAGACGGTCTTCCTGAAAACAAACCACGA
TATCTCATGGGTGTAGGATATACTGTAGACTTGATTGTGTGTTCGGCACTTGGTTGTGAT
ATGTTCGATTGCGTTTACCCAACAAGGACTGCGAGGTTCGGGTCTGCCTTGATTCTTTCA
GGACAAATCAATCTAAAAAGTTCAGAATTCTCCAAGGATTTCAACCCGATAGATGAGGAA
TGTTCGTGTCACACCTGTCGTAATTATTCCAGAGCTCACATCAATGTATTGTTTAGAAAT
AATAATCCCAGTGCCTGCATTATGTTGACGGTTCACAACATAGCATACCAAGCAGCTCTT
ATGTCTGCAATAAGATGTTCGATATCAAAAGACAATTTTCCTTCATTCATCAAATCAAAA
TTTGAACAGCTGTTCAAAGATCCATCGTTCTATCCTAACTGGGCTTGCGATGCATTGTTG
TCAGTGGGAGTGAATATAAAATAG

InterProScan

Gene3D	TGT-like_sf (IPR036511) - T[1-168] 2.7E-64
TIGRFAM	tRNA_ribo_trans-like (IPR002616) - T[3-163] 1.4E-50
Pfam	tRNA_ribo_trans-like (IPR002616) - T[4-158] 3.7E-57
SUPERFAMILY	TGT-like_sf (IPR036511) - T[4-162] 9.81E-58

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TGT_HUMAN	59.14 %	245	5.9E-81