- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S23.g11635.01.t
Possible name(s)
IVNS1ABP; KLHL17; KLHL20
Gene model
Location
S23 [191,438 / 201,503]
Amino acid sequence
Length: 954
>Harore.CG.MTP2014.S23.g11635.01.p
MRCPIQLNACCSPVEAHDTILEVWSLRKPVCIYILIVLQQCLHRTLCYQGRNDKQVHEFL
KMIVRILARYFNQPLYQGQQSLYLLVCSRSCRATINSNNNRIFRQTFIIGKILFQSACTS
SHHKMDDIKNQSIESVPGKNTSENSSNGSKHDVSDCKNALVQKEDVCNAVSGVIQESDRL
NIIEGSGIEFAGRDLCVIELETNESRQDNMEAAVQINGNHDCSSVESRNAGTGLQRLSSN
DIYPDKEAEICQTSDNSSDEESEDVYGSQIRESKQSSPKVGFKQRPQTHPLLWTDDELYT
STMHHLDVFRRNKKFCDAILQVGGREIYCHRIVVVGASRFLYKELLREEEGNGHLPRITI
NHFKPTLSPDALECLVDYMYTSKLVIPQGLLIPVYCASVNLKMERVMPICRRHIINNLDV
ENCVETWRLASNVEDIDLLNVVAEYIEEHFELVTKSNEFLVLPKIRMVTLTQKFIAESSF
QVIPHDSNVLSQLAMGWVKKMIQLKGDSYMEDLTEQIQRLTVEELTAVGDNLPNMLDQSN
QERRPVNFDNPNHNSIGLTRSLSEDSLSSSNSTKSSGPSCCKVDGQWNIIASMPTTDHVI
MLCCLGDVLSTLCLHLTSNMSSVPNFNTGNGSTSSCVSASSSSSHSCTSSVGSVTELSHL
TCVRCAAGVTVLNGKIYALGGYNQSECLDTVECYDPSANRWSPLARMAEKRARFSAAVLH
GQIYAVGGSTGSKDQSSMEKYDPVSDRWTAAPSLPMRCSGAGVAVLGGCLYCIGGVQQTT
GVAGLKICHKFNPKTEVWCQIAPLNTGRSLAGASVLNDLLYCVGGTDGWTSLTTVECYDG
EKWFFVAPLKVPRRGAGLATQMDKLYCIGGSDGGSFWSSMEEYSPVTDSWTVLKFSLTLP
RCNVGLVSLNGLLFAVGGYSGRHFLSSIETLDESGDVWTTHDTHVVASLASLTA
Nucleotide sequence
Length: 4,636
>Harore.CG.MTP2014.S23.g11635.01.t
ATGCGATGTCCAATACAACTGAATGCTTGTTGCTCACCTGTGGAGGCTCATGATACTATT
CTAGAAGTGTGGTCCCTCAGAAAACCGGTTTGTATCTATATATTGATAGTCCTGCAACAG
TGCCTTCATAGAACACTGTGTTATCAAGGTAGAAATGACAAACAAGTTCATGAGTTTCTC
AAGATGATCGTCAGGATTCTTGCTCGTTATTTCAATCAACCGCTTTATCAAGGTCAACAA
TCGCTCTACCTGCTTGTATGTAGCCGGTCGTGCAGGGCTACAATCAACTCGAACAATAAT
CGTATCTTTCGACAAACATTCATCATCGGTAAAATTCTTTTCCAAAGTGCTTGTACATCA
TCACATCATAAAATGGATGATATCAAAAATCAAAGTATTGAGAGCGTGCCCGGAAAGAAC
ACATCCGAAAACTCTTCAAACGGCAGTAAACATGATGTAAGTGACTGCAAGAATGCACTT
GTGCAGAAAGAAGATGTCTGCAATGCGGTATCAGGTGTCATACAAGAAAGTGATAGGTTG
AATATTATAGAAGGCAGTGGAATAGAATTTGCTGGTAGAGATCTGTGTGTGATTGAATTG
GAGACAAATGAATCGAGACAGGATAACATGGAAGCTGCAGTTCAAATCAATGGTAATCAT
GATTGTTCGAGTGTCGAAAGTAGAAATGCTGGCACGGGCTTGCAGCGGCTCAGTAGTAAC
GATATCTACCCGGACAAAGAAGCAGAGATCTGCCAAACGTCTGATAATAGCAGCGATGAA
GAATCTGAAGATGTGTACGGGAGTCAAATACGAGAATCCAAACAGTCAAGTCCAAAAGTC
GGTTTCAAGCAAAGACCACAGACTCATCCTCTGCTGTGGACTGACGACGAATTATACACT
TCAACAATGCACCACCTCGACGTATTTCGCCGTAACAAAAAGTTCTGTGATGCTATTTTA
CAGGTCGGTGGACGGGAAATATATTGTCACAGGATAGTGGTTGTCGGCGCATCACGTTTC
TTATACAAAGAACTGCTCAGAGAGGAGGAAGGAAACGGACATTTACCTAGAATTACGATC
AACCACTTCAAGCCTACATTGTCTCCTGATGCACTAGAATGTCTTGTAGACTACATGTAT
ACTTCTAAATTGGTCATACCACAAGGACTACTGATTCCAGTATATTGCGCAAGCGTGAAT
CTCAAGATGGAGCGTGTTATGCCCATCTGCCGGAGACATATTATTAACAACCTCGATGTA
GAAAACTGTGTAGAGACATGGAGACTCGCTTCTAATGTGGAAGACATTGATTTGCTCAAC
GTTGTAGCGGAGTATATAGAAGAGCATTTCGAACTTGTAACGAAGAGCAATGAATTTCTT
GTGCTGCCGAAAATCAGAATGGTGACTCTCACACAGAAATTTATTGCTGAATCTAGTTTT
CAAGTAATCCCACATGACAGTAATGTTCTGAGCCAACTGGCTATGGGATGGGTAAAAAAA
ATGATCCAGTTGAAGGGAGATAGTTACATGGAAGATCTTACAGAACAGATTCAGAGACTG
ACAGTTGAGGAACTGACCGCTGTAGGTGACAACCTACCAAATATGCTAGATCAGAGTAAT
CAGGAGAGAAGACCTGTGAATTTTGATAATCCCAACCACAATTCAATAGGGCTTACAAGG
TCGTTGTCTGAAGATTCACTTTCGTCATCCAACTCGACCAAAAGCAGCGGCCCTAGCTGC
TGCAAAGTGGACGGACAGTGGAACATCATTGCGTCCATGCCCACCACAGATCATGTGATC
ATGCTTTGTTGCCTTGGCGACGTACTTTCAACCTTATGCCTTCATCTGACAAGCAACATG
AGCTCAGTACCGAACTTCAATACTGGAAACGGTAGTACGAGCAGCTGCGTTTCAGCTTCC
TCGTCTTCGTCTCACTCATGCACTTCGTCTGTGGGATCAGTAACCGAGCTTTCGCACTTG
ACATGTGTGAGATGCGCTGCTGGCGTGACGGTTTTGAATGGAAAAATATACGCTCTTGGA
GGATACAATCAATCTGAATGCTTAGATACGGTCGAATGTTATGACCCTAGCGCCAACCGA
TGGAGTCCTCTGGCTCGCATGGCTGAAAAAAGGGCAAGGTTTTCTGCTGCTGTTCTCCAT
GGACAGATCTATGCTGTTGGTGGATCAACAGGCTCAAAGGACCAGTCCTCTATGGAAAAG
TATGATCCTGTTTCAGACAGATGGACTGCTGCACCTTCTCTACCTATGAGATGTTCGGGA
GCTGGGGTGGCTGTATTAGGAGGATGCTTGTATTGCATAGGTGGAGTGCAGCAGACAACA
GGAGTAGCTGGTTTGAAAATATGCCATAAGTTCAATCCGAAAACCGAGGTGTGGTGTCAA
ATTGCCCCGTTGAATACTGGCCGCAGTTTAGCAGGAGCATCGGTCCTCAATGACCTTTTA
TATTGTGTCGGTGGGACAGATGGCTGGACCAGCTTGACTACAGTAGAATGCTACGATGGA
GAGAAATGGTTTTTTGTCGCGCCGTTGAAGGTGCCCAGACGTGGTGCTGGATTGGCAACC
CAAATGGACAAACTGTATTGCATCGGTGGTTCAGACGGTGGTTCTTTCTGGTCGTCGATG
GAAGAGTACTCGCCAGTGACCGATTCCTGGACAGTTCTTAAATTCAGCTTGACGTTGCCA
AGGTGCAATGTTGGTCTTGTTTCTCTGAACGGCTTGCTCTTTGCTGTGGGTGGATATTCT
GGACGGCATTTCCTGAGTTCAATCGAAACCCTAGATGAAAGCGGTGACGTCTGGACAACT
CATGACACTCACGTTGTTGCTTCGCTTGCGTCCCTGACTGCCTAATTATTAGATTCATGC
CATGTGCTTTGCCACTGCATAGAAAGAGATTAGGTCTTTTAAATTAAGATGGACATAATC
ATGAATTTTCTTTATTGTAATTTTATTTAAAATACTCAATTCCACTGTCACTTGTACCCT
GTACCCTTCAGTTTCATTTTTGGGTAAGATCCAGAACAGTTCTCGAGTCCCTAGTCACAT
TCACGATTCCAGGTTTCTTCAATATCTCCCCTATTTTGAATTGTCGTCTAGGAATATTTT
GGCATCTATATCGAGCGCACTGTATATGTATGGTAACCTATGACCATGTAGGCTTATGCA
ATGTTTACCCGCTGGGAAGTTCGCAAATGGCCATCCATTCGTAATACCTCTGTTCCTTGC
TTGAAAATAGGGTTATGAATAATAATAATAATAAATTTAATGAAAAAAGTTCCGTGTATA
AAATCAGCAAATTGACGCGTAAATATTTCTACGAAACCTGATAAACTTGATTGTAGTATT
ATTATTGAAGTTCAAAATTGATACACTTGACATTTGCCCGATGTTTTCTATTGTGTAGAT
CTATGAATTTCTCCCGTTATGTTTTGTTGAAGTAATTTTTTTATCCTGAGATAAGACTTG
GTCATTCTGAATGCAAAATAAACATTATCAGTGTTAATGGTAAGAGAACACTATAGATTC
CCAAATGGTATCAGCTTTTATTTCGCTGTCGCAGCTTTTGTCTGTTTTTCTACACTGTCG
GTTTAAACAACTGCCTGAGTGCAGTGTTTTATAGAGTCCATTTCTATAGAATAATTACTG
TTCATACTTCTCTCATTAGGTTATTTTATGCGTTAGCCGATTGTCTAGTTCCCTTACTAG
ATATATTATTTCTTGTAAACAAATTGGTGTTTCATCCAATGCCACAAACATGCACCATTT
GCTTTTCAAACTTACTTCGCTATTGCAACCGACCTGCTTTTACCTAACAGTAACAAATCC
TTTGAATAGAACGAAGGATCTAATGATCTGTATATAATATCATAGTCAACTGAACAGTTA
AACTGCTCTCTTCTTGTGCTTTATTCACATCTTTCAATGTGAGTAAAAAAAAAACATTAT
TATCGCCAGCAATTATAGATATTGATAATTATAAGATTTAAGAAATGCATTGCTTTGTTT
TTTATTGGCTATCCCATAACTTTGAATCATTGATGAAATTGCCAATTTTGATATCTTAAG
TTGGAAATGTAAATCCATTACATTTTGGCACACTAGCCTCAGTTGTCAAATAGGTGCATG
CGAGAGTGCAGTGGTGTCGTACAATTTAATATGCTGCCTTGGGTGAAGTGTGATAATGCA
AAAACAGATATATACACCCATCAAAAAATATTCTGCTGACTAATTCGGCCTAAAGTATTC
CCCTTGCCCTCTTTCCTGCGCTATTCATGGAAAACCTACATGGAGTTTATTCTATGTCTA
GAACTCGCATAGAATCCTTGCCAGATCACGCCTGCTGCAACAGAAACCAATTGCCTTTAT
TATAAAACTCCTCTTGAATCAGCAGAATTTCTCTTGCATTATCTCTGTATATAGCTGTTA
ATTTAGACGAGATTATTTCCGATGTAAATAGATTACTGTTACACTGAAATGGTATTTTGT
AGGTTTTATGATTTATTCAGTCACTGTACAGTTGTAGCGGTGGTGAATTTTGTTTCTAAG
TATTGTTTGTTTGGTCGATTACCTAACTGTCCTGTTTGTCATTCACCAAGCAGTCAATAA
ATCACTGACAAGACGA
| SUPERFAMILY |
SKP1/BTB/POZ_sf (IPR011333) - T[296-416] 7.46E-20 |
| Pfam |
BTB/POZ_dom (IPR000210) - T[307-417] 4.0E-14 |
| ProSiteProfiles |
BTB/POZ_dom (IPR000210) - T[316-388] 15.494 |
| SMART |
BTB/POZ_dom (IPR000210) - T[316-418] 5.6E-11 |
| Pfam |
BACK (IPR011705) - T[423-514] 3.3E-5 |
| Gene3D |
Kelch-typ_b-propeller (IPR015915) - T[563-782] 5.1E-44 - T[783-950] 3.6E-43 |
| SUPERFAMILY |
Kelch-typ_b-propeller (IPR015915) - T[650-839] 2.88E-51 |
| Pfam |
Kelch_1 (IPR006652) - T[664-707] 5.5E-15 - T[711-755] 6.0E-13 - T[757-805] 1.2E-7 - T[808-849] 4.1E-9 - T[852-893] 1.0E-7 - T[900-939] 2.3E-7 |
| SMART |
Kelch_1 (IPR006652) - T[675-721] 6.1E-16 - T[722-768] 1.4E-11 - T[769-818] 0.046 - T[819-863] 1.9E-9 - T[864-911] 1.3E-8 - T[912-954] 9.4 |
| SUPERFAMILY |
Gal_Oxase/kelch_b-propeller (IPR011043) - T[842-941] 1.28E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| KLH20_HUMAN | 25.753 % | 208 | 2.51E-57 |
| KLH17_HUMAN | 24.553 % | 191 | 2.61E-51 |
| NS1BP_HUMAN | 33.484 % | 339 | 7.3E-105 |