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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...' > 
  2. Transcript 'Harore.CG.MTP2014.S3...' > 
  3. Transcript 'Harore.CG.MTP2014.S2...' > 
  4. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S241.g10718.02.t

Possible name(s)

B3GLCT; C1GALT1; RFNG

Gene model

Harore.CG.MTP2014.S241.g10718

Location

S241 [33,131 / 37,633]

Sequences

Amino acid sequence

Length: 598

>Harore.CG.MTP2014.S241.g10718.02.p
MMSSQQLCQLCPSQPMNLRSCYITRVSTQSVWQSYGSVNTFRWQSLVGAEKDHNALTLVC
GLAAISGNKTKMCCMGGFKMKIELFVLINLFHLAFSDQLTLIIVIRSQANSFHSGLAQAL
LENIDLQAKYLDTGTVKVVQAHKEWSDNIDKAWAILPVIPSLVEKHGSNADWVMFVEDNT
EIRLANLLKFLTKFNSKEDHLLARGLFDNDITIIHHFSMFTAKDGSKFLYPDFASGWILS
RNLMLKMQQDISERKFESDFQIDLKHEIAKYLQKSFSVEVTHAPEFCGAGEENEKCITTV
RRELEDCSSKYNVDDIFFAVKSTEKFHKDRLAVVKKTWLPRTKLVTIYSNVTDPSIPTVD
CGVPNTERGHCGKTNAILKDFYERQDLKQVPWLFIADDDTILSVSRVIKFLSCYNHDDAI
FMGEKYGYGLLSQYGYSYITGGGGMIFSRSAVKAWLSECSCPSDDTPDDMYLGQCLYFRA
GLVSTHSPLFHQARPDDYAVGYLANQVPLSFHKHWNNDPVKVYKQWFEESDSVLEKHSHP
TTFVLTSTIPDVVPSPLPPTPTEDQVKDEFIKTVAMHCRESIDFIILSKLYMASFSSI

Nucleotide sequence

Length: 1,797

>Harore.CG.MTP2014.S241.g10718.02.t
ATGATGTCCTCTCAGCAACTCTGTCAACTCTGTCCATCTCAGCCAATGAACTTGCGGTCA
TGTTATATTACACGGGTCAGTACACAAAGCGTGTGGCAAAGTTACGGGTCAGTGAACACA
TTTCGGTGGCAAAGTTTGGTTGGAGCAGAAAAAGACCACAACGCATTGACCTTGGTTTGC
GGTCTTGCCGCCATTTCCGGAAATAAAACAAAGATGTGTTGCATGGGCGGCTTCAAGATG
AAAATAGAACTGTTTGTACTCATAAATTTATTTCATCTGGCTTTCTCTGATCAACTAACT
TTGATAATTGTTATACGATCTCAAGCTAACTCCTTTCATTCGGGTCTCGCCCAGGCGCTT
CTGGAAAATATTGATCTGCAAGCAAAATACTTAGACACGGGAACTGTAAAGGTTGTACAG
GCGCATAAGGAATGGTCTGATAATATTGATAAGGCTTGGGCAATCCTTCCTGTAATACCC
AGTCTCGTTGAAAAGCATGGAAGCAATGCTGATTGGGTCATGTTTGTAGAAGACAACACT
GAGATAAGGCTGGCAAATCTTCTAAAATTCCTAACAAAATTTAATTCAAAAGAGGATCAC
TTGCTTGCTAGAGGCCTCTTTGACAATGATATTACGATAATCCATCATTTTAGCATGTTC
ACTGCAAAGGATGGAAGCAAGTTCCTTTATCCTGACTTTGCGTCCGGTTGGATTCTAAGC
AGGAATCTAATGTTGAAAATGCAACAAGATATTTCGGAAAGAAAATTTGAAAGTGACTTT
CAAATTGATTTGAAACATGAAATTGCAAAATATTTACAGAAGTCATTCTCTGTTGAAGTA
ACCCATGCACCAGAGTTTTGTGGTGCTGGAGAAGAGAATGAAAAGTGCATAACAACAGTG
AGAAGAGAACTGGAGGATTGCAGCAGTAAGTACAATGTGGATGACATCTTTTTTGCCGTT
AAAAGTACTGAAAAGTTTCATAAGGATAGATTAGCAGTTGTCAAAAAAACATGGCTGCCA
AGAACGAAACTGGTCACGATATACAGCAACGTCACCGATCCCAGTATTCCGACAGTGGAC
TGTGGTGTTCCAAATACGGAACGAGGCCATTGTGGCAAAACCAATGCAATTTTGAAAGAT
TTCTATGAGCGACAAGACCTGAAGCAGGTGCCTTGGTTGTTTATTGCTGATGACGACACA
ATATTGAGTGTCTCGAGAGTTATTAAGTTCCTGAGTTGCTACAATCACGATGATGCAATT
TTCATGGGTGAAAAGTACGGCTATGGACTCCTATCACAGTACGGTTACAGTTACATAACA
GGGGGAGGGGGTATGATTTTCAGTAGGTCTGCTGTTAAGGCATGGCTCAGCGAATGCTCT
TGCCCGTCCGATGATACCCCTGACGATATGTACCTCGGACAATGTCTTTATTTCAGAGCC
GGCCTGGTATCAACCCACTCTCCTTTATTTCACCAAGCCAGACCTGACGATTATGCTGTC
GGATATCTAGCCAATCAAGTTCCGTTATCATTCCACAAGCATTGGAATAATGATCCCGTA
AAGGTTTACAAACAGTGGTTTGAAGAATCTGATTCTGTATTAGAAAAGCATTCACATCCC
ACCACTTTTGTCTTAACTAGCACAATTCCAGATGTGGTGCCCTCACCGTTGCCGCCCACT
CCTACAGAAGACCAAGTGAAAGATGAATTCATAAAAACTGTGGCAATGCATTGCAGAGAA
TCCATCGATTTCATAATACTGTCCAAATTATATATGGCTTCATTTTCTTCCATATAA

InterProScan

Pfam
Fringe-like (IPR003378) - T[168-289] 2.5E-8 - T[311-528] 2.5E-51

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
B3GLT_HUMAN 45.958 % 362 5.48E-119