- Transcript 'Boleac.CG.SB_v3.S103...' >
- Transcript 'KH2012:KH.L133.5.v1....' >
- Transcript 'KH2012:KH.C9.64.v1.A...' >
- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S241.g15057.01.t
Possible name(s)
NELFE
Gene model
Location
S241 [81,715 / 83,219]
Amino acid sequence
Length: 411
>Harore.CG.MTP2014.S241.g15057.01.p
MTNQPFKPIERLGIRAKYPGASGLARISSSWTDSNPILCGYSGYRNFGNGGAGGCGVFSK
KDASEREMMPLIACRKVKLMGFSSKLTEEEEFLKKKYVILRKSKKKFQQLRMKRKQKDKD
DAENGPCKAKQKKGLIKSTSDGIVPLLGNKSTGLTNVTTANAAKNTEAAKMLIKSGVIQL
KPENRTTFKRSVKLAKKKKDQDDSGVKLVFQPFSPGGNASSDQLSSKKETNSKESFPEKL
PYKIFPSHRENQNRFKKGKKFERHPPKKGNTIYVHGCDLSDDLLQENFEQFGLIVNINVE
QNKKSGFVTYNNLDAADNAIAKMDNAMVSGTRLKVSLARRQPMIDSAVTASAWSGLATGQ
GEKGFNFKDTRSLKVYDDDTFSDRDVEPEVGKSSNPMAFKSIDTVDDISSQ
Nucleotide sequence
Length: 1,236
>Harore.CG.MTP2014.S241.g15057.01.t
ATGACAAATCAGCCTTTCAAGCCCATTGAGAGATTGGGTATCCGAGCTAAATACCCTGGG
GCCTCTGGCCTGGCAAGAATATCAAGCAGCTGGACCGATTCGAACCCAATTTTGTGTGGT
TATTCAGGGTATCGTAACTTTGGTAATGGCGGCGCCGGCGGCTGCGGCGTTTTTTCAAAA
AAAGATGCCTCGGAGCGCGAAATGATGCCCCTAATAGCTTGTCGTAAAGTTAAGTTGATG
GGGTTTTCGTCTAAATTAACGGAGGAAGAGGAATTTTTGAAGAAAAAGTATGTGATATTA
CGGAAAAGTAAAAAGAAATTTCAGCAACTGCGTATGAAACGCAAACAGAAAGACAAAGAC
GATGCCGAAAATGGGCCCTGTAAAGCTAAGCAGAAGAAAGGGTTGATCAAGTCCACTTCC
GACGGTATCGTGCCTTTGTTGGGAAATAAAAGCACAGGTTTAACTAATGTAACAACTGCA
AATGCTGCAAAGAATACAGAAGCCGCGAAGATGTTGATAAAGAGCGGGGTGATACAGCTG
AAACCGGAGAATAGAACTACTTTCAAACGATCTGTGAAACTAGCTAAGAAAAAAAAGGAC
CAAGATGACAGTGGTGTTAAGCTCGTTTTTCAACCCTTCAGTCCAGGTGGAAATGCTTCC
TCTGACCAGTTAAGCTCGAAGAAAGAAACGAATTCGAAAGAATCATTCCCTGAGAAACTA
CCATATAAAATATTCCCGTCTCACAGAGAAAATCAAAATCGTTTCAAGAAAGGGAAGAAG
TTTGAGCGCCACCCTCCAAAAAAAGGGAATACGATTTACGTGCATGGATGCGATCTCTCT
GATGATCTGTTGCAAGAAAATTTTGAGCAGTTCGGCCTCATCGTTAATATAAATGTTGAA
CAAAACAAAAAAAGCGGTTTCGTAACATATAACAATTTGGATGCAGCTGATAATGCCATT
GCCAAAATGGATAATGCCATGGTGTCTGGAACGAGGCTGAAAGTTTCTCTTGCTCGACGG
CAACCGATGATCGATTCAGCTGTGACCGCTTCTGCATGGTCTGGTTTAGCTACCGGACAA
GGCGAAAAAGGTTTCAACTTTAAAGACACAAGGTCCTTAAAGGTGTATGACGATGACACT
TTTTCTGATCGCGATGTCGAACCAGAGGTGGGAAAAAGCAGCAATCCGATGGCATTTAAA
AGCATTGATACTGTTGATGACATTAGCAGTCAGTGA
| PANTHER |
NELFE (IPR033102) - T[80-233] 2.9E-58 - T[248-381] 2.9E-58 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[246-343] 4.07E-16 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[265-350] 2.4E-18 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[270-340] 13.703 |
| SMART |
RRM_dom (IPR000504) - T[271-336] 5.7E-10 |
| Pfam |
RRM_dom (IPR000504) - T[278-334] 2.2E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NELFE_HUMAN | 38.06 % | 108 | 2.12E-26 |