- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S245.g05817.01.t
Possible name(s)
AMY1A; AMY1B; AMY1C
Gene model
Location
S245 [88,756 / 90,909]
Amino acid sequence
Length: 281
>Harore.CG.MTP2014.S245.g05817.01.p
MLPGSEALAFINNHDNQRGHGGGGSIVTFKDSYDLKILTAFMLAWPYGVPRVMSSYYFDD
PDQGPPSSQRGVNGDGSCSNGWVCEHRWRQIRNMFGFSTAVIGTSMNDWWDNGNNQIAFA
RENKGFIAINRAGYDMSENLQTGLPQGTYCNVINGDYTNGGCGGECIAVGTDGKANIFIA
GDSSDPIVAIHANARSDTCNTGESGGGGTGTGTGTGGGSSTTCVDCTCTSKIDCGDLTST
EASCEADGCMWCESQIAGEPWCFYTADTTPSGGNGLFFTIS
Nucleotide sequence
Length: 846
>Harore.CG.MTP2014.S245.g05817.01.t
ATGTTGCCGGGATCAGAAGCCTTGGCATTTATCAATAACCATGACAACCAGAGAGGACAT
GGTGGTGGCGGTTCCATTGTCACATTCAAAGATTCATATGATTTAAAGATCCTGACTGCT
TTCATGTTGGCCTGGCCATACGGAGTACCAAGAGTGATGTCCAGTTACTACTTTGATGAT
CCGGATCAAGGACCCCCGTCCAGTCAACGTGGCGTGAATGGAGATGGTTCATGTTCGAAC
GGATGGGTATGTGAGCATAGATGGCGACAAATAAGAAATATGTTTGGATTTTCCACCGCA
GTCATAGGCACCTCCATGAATGACTGGTGGGACAACGGTAACAACCAGATTGCTTTCGCT
CGTGAAAACAAGGGATTTATTGCTATAAATCGTGCTGGCTATGACATGTCGGAGAATCTA
CAAACTGGATTACCACAAGGAACCTACTGCAATGTAATTAATGGTGATTATACCAACGGA
GGTTGTGGAGGTGAATGTATAGCGGTCGGTACCGATGGAAAGGCTAATATATTTATTGCT
GGAGACAGCTCTGATCCGATAGTCGCTATACATGCCAATGCACGATCAGACACATGCAAC
ACAGGTGAATCTGGGGGAGGTGGCACCGGCACCGGTACTGGTACCGGAGGAGGGTCAAGC
ACAACTTGTGTCGACTGCACATGCACTTCTAAAATCGATTGCGGAGATCTGACTAGCACG
GAAGCATCATGTGAAGCTGACGGATGCATGTGGTGCGAGTCTCAAATAGCAGGCGAACCA
TGGTGCTTTTATACAGCAGATACTACACCGAGCGGTGGGAATGGTTTATTCTTTACTATA
TCTTAA
| SUPERFAMILY |
Glycoside_hydrolase_SF (IPR017853) - T[3-124] 3.4E-19 |
| Gene3D |
Glyco_hydro_b (IPR013780) - T[104-196] 2.7E-35 |
| SMART |
A-amylase_C (IPR031319) - T[107-195] 1.4E-41 |
| Pfam |
A-amylase/branching_C (IPR006048) - T[110-180] 7.7E-16 |
| ProSiteProfiles |
P_trefoil_dom (IPR000519) - T[221-266] 12.558 |
| SMART |
P_trefoil_dom (IPR000519) - T[226-269] 0.0061 |
| Pfam |
P_trefoil_dom (IPR000519) - T[229-264] 3.8E-6 |
| CDD |
P_trefoil_dom (IPR000519) - T[231-264] 4.85745E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| AMYP_HUMAN | 49.524 % | 199 | 1.14E-60 |
| AMY1_HUMAN | 50 % | 202 | 1.56E-61 |
| AMY2B_HUMAN | 49.524 % | 201 | 5.32E-61 |