- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S249.g06506.01.t
Possible name(s)
ZNF226; ZNF420; ZNF569
Gene model
Location
S249 [26,450 / 27,806]
Amino acid sequence
Length: 451
>Harore.CG.MTP2014.S249.g06506.01.p
MVIHCEVCDLPCPSKPHLKIHMRKHTKEKPFQCDVCFKRFTQKGQLKIHMRYHTGQKPFG
CDVCDKYFFSKSVVKKHMSIHMKPYTCEVCSMKFRDNSRYINHMKLMHSELNCKCLVCGN
IFTSKYGLKVHMEEHKGSDKKYHCEVCDLPCRGGFILQRHMRKHTKEKPFQCDVCFKGFS
RKANLNVHQRIHTKEKSYPCEVCSMAFERRKECNEHMKLMHSKMNYKCLVCGNEFTSEYD
LKIHMEEHKGTDNKYHCEVCDLPCRTLTHLKDHMKKHTEEKPFQCDICLKRFAHKQNLKN
HERIHTGEKPFGCDVCGKCFSNRCTVRMHMKTHTNEKPYQCKFCSMTFIQSSARDRHIKL
MHSKLNCKCSICGNILTSKYGLKIHMKEHKGSDGQYHCVVCDVICSSPFALTTHMRVHTK
EKPFICEICDKSFSQKSQLTKHIANHLRNIS
Nucleotide sequence
Length: 1,356
>Harore.CG.MTP2014.S249.g06506.01.t
ATGGTGATACATTGTGAGGTTTGCGATTTACCATGTCCAAGCAAACCTCATCTCAAAATC
CACATGAGGAAACATACAAAGGAAAAGCCGTTCCAGTGTGATGTTTGCTTCAAGAGATTT
ACACAAAAAGGGCAATTAAAAATCCACATGAGGTATCATACAGGACAAAAACCATTCGGA
TGCGACGTATGTGATAAATATTTTTTCAGTAAAAGCGTGGTTAAGAAACACATGAGTATT
CACATGAAACCATATACATGCGAAGTCTGTTCCATGAAATTTAGGGATAACTCAAGGTAC
ATCAATCACATGAAACTCATGCATAGTGAACTAAACTGCAAGTGTTTGGTATGTGGAAAT
ATATTCACATCTAAATATGGCTTGAAAGTACATATGGAAGAACATAAAGGATCGGATAAG
AAATATCATTGTGAAGTTTGCGACTTACCATGTAGAGGTGGATTTATACTCCAGAGACAC
ATGAGAAAACACACGAAGGAAAAACCGTTCCAGTGTGATGTTTGCTTCAAAGGATTTTCA
CGAAAGGCAAATTTAAACGTCCACCAGAGAATTCATACTAAGGAGAAATCATATCCATGT
GAAGTCTGTTCGATGGCATTTGAACGAAGGAAAGAGTGCAACGAACACATGAAACTAATG
CACAGCAAAATGAACTATAAGTGTTTGGTATGTGGAAATGAATTTACATCTGAATATGAT
TTGAAAATACATATGGAAGAACATAAAGGAACTGATAACAAATATCATTGTGAGGTTTGC
GACTTACCATGTCGAACCCTAACCCACCTCAAGGACCACATGAAAAAACATACAGAGGAA
AAACCGTTCCAGTGTGATATTTGCCTCAAGAGATTTGCACATAAACAAAATTTGAAAAAC
CACGAGAGAATTCATACAGGAGAAAAACCATTCGGATGTGACGTATGCGGTAAATGTTTT
TCCAATAGATGCACGGTTAGGATGCACATGAAGACACATACGAACGAGAAACCATATCAA
TGTAAATTCTGTTCCATGACTTTTATACAAAGCTCAGCGCGTGATAGACACATTAAACTC
ATGCACAGCAAACTGAACTGCAAGTGTTCGATATGTGGAAATATACTCACATCTAAATAT
GGCTTGAAGATACATATGAAAGAACATAAAGGATCTGATGGTCAATATCATTGCGTGGTT
TGTGACGTGATATGTAGTAGTCCATTTGCTTTAACTACACATATGAGAGTTCATACGAAA
GAAAAACCTTTCATATGTGAAATCTGTGATAAATCGTTCAGTCAGAAATCACAGTTAACT
AAACATATTGCAAACCATTTGAGAAATATCAGTTAA
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[3-30] 10.471 - T[31-58] 15.5 - T[59-86] 9.951 - T[85-109] 10.014 - T[111-140] 10.055 - T[142-169] 10.845 - T[170-197] 14.669 - T[198-226] 9.847 - T[226-253] 11.24 - T[255-282] 11.448 - T[283-310] 16.394 - T[311-338] 15.168 - T[339-363] 9.619 - T[367-394] 9.162 - T[396-423] 11.552 - T[424-446] 11.261 |
| SMART |
Znf_C2H2_type (IPR013087) - T[3-25] 0.0095 - T[31-53] 4.6E-4 - T[59-81] 0.036 - T[85-108] 0.0016 - T[113-135] 0.083 - T[142-164] 0.14 - T[170-192] 0.0017 - T[198-221] 0.0044 - T[226-248] 0.0019 - T[255-277] 0.026 - T[283-305] 0.003 - T[311-333] 0.013 - T[339-362] 0.02 - T[367-389] 0.061 - T[396-418] 0.0049 - T[424-446] 2.2E-4 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[4-34] 8.09E-7 - T[25-77] 2.31E-17 - T[83-135] 1.54E-10 - T[156-207] 2.48E-18 - T[192-244] 8.06E-10 - T[266-320] 1.15E-19 - T[305-357] 1.61E-16 - T[347-402] 1.12E-5 - T[395-446] 7.19E-15 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[5-25] . - T[33-53] . - T[61-81] . - T[87-108] . - T[113-135] . - T[144-164] . - T[172-192] . - T[200-221] . - T[228-248] . - T[257-277] . - T[285-305] . - T[313-333] . - T[341-362] . - T[367-389] . - T[398-418] . - T[426-446] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN226_HUMAN | 38.085 % | 288 | 2.07E-89 |
| ZN569_HUMAN | 37.162 % | 278 | 1.66E-86 |
| ZN420_HUMAN | 38.063 % | 282 | 5.31E-88 |