- Transcript 'Cisavi.CG.ENS81.R347...' >
- Clone 'ma329e13' >
- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S250.g09381.01.t
Possible name(s)
ACTA2; ACTB; ACTG1
Gene model
Location
S250 [127,733 / 130,389]
Amino acid sequence
Length: 408
>Harore.CG.MTP2014.S250.g09381.01.p
MSQKIIHKTRLPASTAYLFTFHRQIFNLQTLIMCDEDVAALVVDNGSGMCKAGFAGDDAP
RAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWH
HTFYNELRVAPEEHPVLLTEAPLNPKANRERMTQIMFETFNTPAMYVAIQAVLSLYASGR
TTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE
IVRDIKEKLCYVALDFEAEMQTAATSSSIEKSYELPDGQVITVGNERFRCPEALYQPSFL
GMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEIVALAPPTMKI
KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Nucleotide sequence
Length: 1,235
>Harore.CG.MTP2014.S250.g09381.01.t
ATGTCGCAAAAGATAATACATAAAACGAGACTTCCGGCATCCACAGCTTACTTATTTACA
TTTCATCGTCAAATATTTAACTTACAAACCTTAATAATGTGTGACGAAGATGTTGCTGCT
CTTGTTGTCGACAATGGTTCCGGTATGTGCAAGGCCGGTTTCGCGGGAGATGACGCTCCA
CGTGCTGTGTTCCCATCCATCGTAGGACGTCCCAGACATCAGGGAGTCATGGTTGGTATG
GGTCAGAAAGATTCGTACGTGGGTGATGAAGCTCAAAGCAAGAGAGGAATTCTGACGTTG
AAATATCCAATCGAACACGGAATTGTCACCAACTGGGATGATATGGAAAAGATATGGCAT
CACACATTCTACAATGAACTTCGTGTAGCCCCAGAAGAACACCCCGTCCTCCTCACTGAA
GCCCCACTTAACCCCAAGGCTAACAGAGAAAGAATGACCCAGATCATGTTCGAAACCTTT
AATACTCCAGCAATGTACGTCGCTATCCAGGCTGTGCTTTCCCTCTATGCTTCCGGACGT
ACAACCGGTATCGTCTTTGACAGTGGTGATGGTGTCTCTCACACTGTACCAATCTACGAA
GGATACGCGCTCCCTCACGCCATCTTGCGTCTTGATTTAGCCGGTCGTGATTTGACCGAT
TATTTGATGAAAATTCTAACAGAGAGAGGATATTCATTCACAACCACAGCCGAACGTGAA
ATTGTTCGTGATATAAAGGAGAAGCTTTGTTATGTTGCTCTCGACTTTGAAGCAGAGATG
CAGACAGCTGCAACCAGCAGTTCTATTGAAAAATCATATGAACTTCCGGACGGACAGGTC
ATCACTGTTGGTAACGAACGATTCCGTTGCCCAGAAGCCCTCTACCAACCATCCTTCCTT
GGTATGGAATCAGCCGGAATTCACGAAACAACTTACAACTCCATCATGAAGTGTGATGTT
GATATCCGTAAGGATCTCTACGCCAACACCGTCCTTTCTGGAGGATCCACTATGTTCCCT
GGAATCGCAGATCGTATGCAAAAGGAGATCGTCGCTCTTGCTCCTCCAACGATGAAGATC
AAAATCATCGCTCCTCCTGAAAGGAAATATTCTGTCTGGATCGGAGGTTCCATTCTTGCC
TCCCTTTCCACGTTTCAACAGATGTGGATCTCGAAGCAAGAGTACGATGAATCCGGTCCA
TCCATTGTCCACAGAAAATGCTTCTAAGCGATTTC
| PANTHER |
Actin (IPR004000) - T[27-407] 8.1E-269 |
| Pfam |
Actin (IPR004000) - T[36-408] 2.7E-149 |
| SMART |
Actin (IPR004000) - T[38-408] 1.2E-236 |
| PRINTS |
Actin (IPR004000) - T[59-68] 1.1E-56 - T[82-93] 1.1E-56 - T[94-116] 1.1E-56 - T[148-161] 1.1E-56 - T[173-192] 1.1E-56 - T[269-285] 1.1E-56 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[86-96] . - T[389-397] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[137-149] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 94.92 % | 755 | 0 |
| ACTB_HUMAN | 95.455 % | 758 | 0 |
| ACTA_HUMAN | 91.777 % | 739 | 0 |