- Transcript 'KH2012:KH.C6.107.v1....' >
- Transcript 'Mooccu.CG.ELv1_2.S66...' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S2518.g00369.01.t
Possible name(s)
NPHP3
Gene model
Location
S2518 [0 / 1,296]
Amino acid sequence
Length: 294
>Harore.CG.MTP2014.S2518.g00369.01.p
TAPQGGGRKTERNINDMISLKENSRRYLEAGEYSLACASLKDLVDLQEDSWSQIETLQQI
VECQVMCNQPCDDELNRITDIYRSINMSSRDIRSTAEKHLLDSQTFPAYILLICSSKMFK
YDTVPSEAVRHIRESVQLLKHILEQMMKKPRLRRTASSQVIPTMYQLLEELRQFDDVSGE
IKVTNEALTLNAIASCHDEVDEYDKSLDVYNEAVELMKREYGSNVEKCHVFGALLHNIGT
TKSYQKKYDEALVYYERALEVGERAEDWSSDDQREKSLEGTRTSLQNARSRSKK
Nucleotide sequence
Length: 887
>Harore.CG.MTP2014.S2518.g00369.01.t
GAACAGCACCCCAGGGAGGAGGTAGAAAAACAGAAAGGAATATAAACGACATGATATCTC
TTAAAGAGAATTCTCGTCGTTATTTGGAAGCGGGAGAATATTCTCTCGCCTGTGCGTCGC
TAAAAGATCTCGTTGATCTTCAAGAAGATTCGTGGTCGCAAATCGAAACCTTGCAGCAAA
TAGTGGAATGTCAAGTGATGTGCAACCAACCGTGCGATGATGAATTGAACAGGATCACTG
ATATCTACCGATCCATCAACATGTCATCGCGGGACATAAGGTCGACCGCTGAGAAACATT
TGCTAGATTCTCAAACATTCCCAGCTTACATCCTGTTGATATGTTCGTCCAAAATGTTCA
AATACGACACCGTACCGAGTGAAGCTGTACGTCACATAAGAGAATCTGTTCAACTTCTTA
AGCACATTCTCGAGCAGATGATGAAGAAGCCACGGCTACGAAGAACCGCATCGAGTCAAG
TCATCCCTACCATGTACCAACTGTTGGAAGAACTCCGACAATTCGACGACGTATCCGGGG
AGATCAAGGTGACAAACGAAGCCCTGACCCTGAACGCCATAGCCTCATGCCACGATGAAG
TCGATGAATATGATAAATCGCTCGATGTCTACAACGAAGCAGTCGAGTTGATGAAACGAG
AATATGGGTCAAACGTCGAGAAATGCCACGTGTTTGGAGCGCTACTACACAACATCGGAA
CTACGAAGAGTTATCAGAAAAAGTATGATGAGGCTCTCGTCTACTATGAGCGAGCATTAG
AAGTTGGAGAGAGAGCAGAAGATTGGTCGAGCGACGACCAAAGAGAGAAAAGTCTTGAAG
GGACGCGAACAAGTCTACAAAATGCTCGCTCCAGGAGTAAAAAGTAA
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[12-51] 2.6E-13 - T[175-262] 2.6E-13 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[17-50] 5.015 - T[187-220] 7.877 - T[232-265] 8.762 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[127-279] 5.2E-14 |
| SMART |
TPR_repeat (IPR019734) - T[187-220] 10.0 - T[232-265] 0.019 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[187-265] 11.181 |
| Pfam |
TPR_repeat (IPR019734) - T[189-222] 0.034 |
| Protein Name | Identity | Bit Score | e-value |
|---|