- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C10.491.v1...' >
- Transcript 'Cisavi.CG.ENS81.R76....' >
- Transcript 'KH2012:KH.C5.184.v1....' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S25.g04680.01.t
Possible name(s)
TRPC3; TRPC4; TRPC5
Gene model
Location
S25 [62,297 / 71,848]
Amino acid sequence
Length: 1,030
>Harore.CG.MTP2014.S25.g04680.01.p
MEDFTAPFQTRHSPSANTSRSFKQDFSRVDTIRLHGYRQKRALHRDILKSVEIKYLQYAS
SGNVQAVKNLFTTYDRAQLNRNCTDYFQRTALVLAIMSRQKGMIKYLLENEVELTESLFY
AVEIEYAEADIVITSEESVFPRFLSPIMLAAHKNNYEILDILYSHGHRLVDLSKHTSNKW
DEMRLRWLFYKAYSSQAYLVLMYYKSKIDPLNEAIELYGKLKNEGRNARETMKDAYLELL
RQCEDFAISLLDQLRTAQEVADLLRFRLFDPNLHKTGQLACSVITTVAGNSDDERDGIFS
FLNINNKNGSLDSTASGLGSKPRTNVHPRMQDLGKAKTVTSSQEQSPAQIVRAFTGNSEV
NSMQLRSSSTTSPQVGGNNPDANSSPYLAASVSSDQRRISSAIENVPEGRHRSLGIRRPV
TNEVDMEYVRPKDFLKPIEKAVDNGMVRLVTSQNVQFALSYLKEGTLFRDSSHKRRWALN
CLIATMFPFISVVFYFFPTTKIGLVARNPKAKLTMEVSSDVCLILLLLVNMVLTEFQIVN
VNDFSYLLIVAYFWMLGKLNNMIFLFYHQGWRVLYSIWNWNDIGSIVFYTAYMVLHIYEY
VERSSLTREASYQWSPIPLADIMITVVYVLVFLRPLEMLRVSLDRMMQDVSKVFVIFLFI
WFAFSSGITTLFARYHIPSVNQSYTGSSICQSKLQHNDDHQDDTADWNNFTCCFTDQKLS
NLGSSLQILFWSIFGYSDNYMSWFNLRCTHEDRIQREITTTFGEVIFAFYHIGIVLVLVN
MLIAIMSGTLQKTVDQNDQQWQFHRMRVWFRFIRTGFYRPPPMNIILRPGEIKFVFHVIG
NGFRILCGYLSSRCRKKRRYQSSEQYEMHHTQLVAGRNLSGIGNNTDIKKITKSNPYQST
GQRISYDNYAVEEPVSRYNIALQKVVKRYLKVNVLLTEGENTHDDFFSGECRCLILFLSS
DTYKDIMLHYLSNTQHRKNNTIITRRIQFEIYRLLYTISNVYLLENFLCLGARLFQNWMH
IKISTQSLLP
Nucleotide sequence
Length: 4,538
>Harore.CG.MTP2014.S25.g04680.01.t
GAGTTGTTAAATTTATTACGTGCCATTAAATAATTTTACCAGTAATCTCTAATTTACTCC
AGTAATTTTCTCTTCGAAATAATACCAAACTTCGTGCGATGAGTGTTAGAGTAAAACAAA
GCAGAAAAAGTCTGTTCACTGTACTGGATAATTTCAGTGTAGAACCATAGATAAGTTGAT
GCGAGTGACATGAGCTAATGGAAATAAGATGGAAGACTTTACTGCTCCATTTCAGACCAG
ACATTCCCCGTCTGCTAACACTTCTAGAAGTTTCAAACAAGACTTTAGTCGAGTGGATAC
TATTCGTCTGCATGGTTACCGTCAAAAACGAGCTCTTCATAGAGATATACTGAAGAGCGT
GGAAATAAAATATTTACAATATGCTTCTTCTGGTAATGTTCAGGCAGTGAAAAATTTATT
CACCACATACGATCGAGCACAACTCAATAGAAATTGTACCGATTATTTTCAAAGGACTGC
CCTCGTTCTGGCAATCATGAGCAGACAAAAAGGAATGATAAAATATTTGCTGGAAAATGA
AGTTGAGCTGACCGAATCGCTTTTCTACGCCGTTGAAATCGAGTATGCCGAAGCGGACAT
CGTAATAACAAGCGAGGAGTCGGTCTTTCCGCGCTTTCTCAGCCCAATTATGTTGGCAGC
TCATAAGAATAACTACGAAATTCTGGATATACTATACAGCCACGGTCATAGACTTGTCGA
TCTATCCAAACATACCAGCAACAAGTGGGATGAGATGCGTCTGAGATGGCTTTTCTACAA
AGCTTATTCCAGTCAAGCCTACTTGGTTCTCATGTACTACAAAAGTAAAATTGATCCACT
AAACGAGGCGATCGAACTGTACGGGAAACTGAAAAACGAGGGTCGGAATGCACGAGAAAC
GATGAAAGACGCCTATTTAGAGCTGCTAAGGCAATGTGAAGATTTTGCAATCTCCCTACT
AGATCAGCTTCGTACAGCACAAGAGGTGGCCGACCTCCTGCGATTTCGCCTGTTTGACCC
CAACTTGCACAAAACCGGTCAACTCGCCTGTTCCGTAATCACAACGGTTGCAGGCAACAG
CGATGACGAAAGAGATGGAATATTCAGCTTCCTTAACATCAATAATAAAAATGGTTCACT
GGATTCAACTGCTAGCGGCCTGGGTTCAAAACCAAGAACCAACGTTCATCCGAGGATGCA
AGATTTAGGTAAAGCTAAAACGGTGACTTCCAGTCAGGAACAATCGCCGGCCCAAATCGT
TCGTGCATTCACTGGAAATTCGGAGGTGAATTCGATGCAGCTGCGTAGCTCGTCCACTAC
TTCGCCGCAAGTCGGGGGAAACAATCCTGACGCGAATTCGTCACCCTATCTCGCAGCTTC
CGTATCATCGGATCAGCGCAGGATATCGTCGGCTATCGAAAACGTGCCAGAAGGAAGGCA
TCGAAGTTTGGGTATACGTCGACCTGTAACCAACGAAGTAGATATGGAATACGTGCGACC
GAAAGACTTTTTGAAGCCGATTGAAAAAGCGGTCGATAACGGCATGGTGAGACTGGTGAC
CAGTCAGAACGTACAGTTTGCTCTCAGTTACCTGAAAGAAGGAACTCTATTTCGGGATTC
GTCCCATAAAAGACGATGGGCGTTGAATTGCTTGATCGCTACTATGTTCCCATTCATCAG
TGTTGTGTTCTATTTTTTTCCTACGACTAAGATTGGACTGGTCGCTAGGAATCCGAAGGC
CAAGCTTACGATGGAGGTGTCATCAGACGTGTGTCTGATTCTATTACTTCTTGTCAATAT
GGTTTTAACCGAATTCCAAATCGTCAACGTGAATGATTTCTCCTATTTGCTCATCGTTGC
CTATTTCTGGATGCTCGGGAAGCTAAACAACATGATCTTCCTGTTTTATCATCAAGGATG
GAGAGTGTTGTATTCGATTTGGAACTGGAACGACATCGGCTCGATCGTATTTTACACCGC
CTACATGGTTTTGCACATATACGAGTATGTTGAGAGATCTTCATTAACTCGCGAGGCAAG
TTACCAATGGTCGCCTATCCCTCTGGCAGATATTATGATAACTGTAGTTTACGTTCTCGT
GTTCTTGAGGCCTCTTGAGATGTTGCGCGTTTCCTTGGATCGTATGATGCAAGACGTTTC
CAAAGTGTTTGTTATATTTCTTTTTATCTGGTTCGCATTTTCGAGCGGAATCACCACGCT
TTTTGCCAGATATCACATCCCATCTGTTAACCAAAGCTACACTGGTTCTTCTATTTGTCA
ATCAAAGCTACAACACAATGATGACCATCAAGATGACACAGCTGACTGGAATAATTTCAC
ATGTTGTTTTACGGACCAAAAACTATCAAACCTCGGCTCTTCGTTGCAAATTTTGTTCTG
GTCAATATTTGGTTACAGCGATAACTATATGAGCTGGTTCAACTTGAGATGTACTCACGA
AGACAGAATCCAAAGGGAAATAACTACCACATTTGGAGAGGTTATTTTTGCTTTTTATCA
CATCGGAATCGTTCTGGTCTTGGTGAACATGTTGATAGCGATCATGAGCGGAACTTTACA
GAAAACTGTGGACCAGAATGACCAACAATGGCAGTTTCATCGAATGAGGGTATGGTTTCG
CTTTATACGGACAGGATTCTACCGACCTCCTCCGATGAACATCATTCTACGACCTGGAGA
AATCAAATTTGTATTTCATGTTATTGGCAATGGATTCCGAATATTATGCGGATACCTTTC
AAGTAGGTGTCGAAAGAAACGGCGCTACCAATCTAGTGAACAGTACGAAATGCACCACAC
GCAGCTCGTGGCTGGGAGAAATCTCAGCGGAATCGGCAATAACACAGACATAAAAAAAAT
TACGAAATCAAATCCATATCAATCAACCGGTCAAAGAATTTCCTACGACAATTACGCTGT
TGAGGAACCGGTTTCTCGTTACAATATTGCTTTGCAGAAGGTTGTGAAGCGGTATTTAAA
AGTCAACGTATTGTTGACTGAAGGCGAGAACACTCATGATGATTTCTTTTCTGGTGAATG
TCGTTGTTTAATTTTATTTCTCTCAAGTGATACCTACAAGGATATCATGTTGCACTACCT
ATCAAATACTCAACACAGAAAAAACAACACAATTATTACTAGAAGAATTCAATTCGAGAT
ATATCGATTGTTGTACACTATTTCAAATGTATATCTACTGGAAAATTTTTTGTGTCTTGG
AGCCCGACTCTTCCAAAACTGGATGCACATTAAAATATCCACACAATCCTTACTTCCTTA
ACGCACACTCGACCTAACTTTCATGTTGGTCTATGTTCTTTCGCCATTTGAATTCATTGC
TTTGTTGTTATTCAATATTCCTTTAGGGTTCAGTTAATTGTAGTGAATGAAATAAGCAAA
ATAAAACTTGCATTATTTTTGCTCTGTTAACAAATTTCATACCTTGCTATATAATTTATA
GCATATACTATCAAACAAAAGTAATTTTATTGAAATGATTTTATCTATTTATTCAACATT
ATTATTGATTTCAAATGGCAGATCACGATAGAAGTTATGTGGCTTGTCAATCCAATCGTA
TCTTTGTTTTTCCCATAAAATTTTTGTTTCCAGCTCTTCTACCGATGACAGTGTCAATAC
AAGCTTGAAATGTTTGAGAATGCTCCACATATTGAGGCCCACAAGGGGAATCAAGTTTAC
TTGGGGCCATGACTTCACTGCAGAACATATATTGTCCGCCTCCTTGACATTGTCTTTCTC
TGTGAACACCAGCAACACCGACTTACTTTCCATGCCTCGAGCAGCCAATACATTTTCTAG
ATAGCTTTGTTCTGCGGAAGGTATCTCAAAGTCTTTCAAAACAAACAGATCTTCTTGAAA
GTACTTGATGCTCAGAGCACTCGTCAAAGAGCGAAGTCGTACATTGGGCAATATCTCTTG
ATAAAGCGCTTTGGGTCCTCGAGGCCCGTGTGCTATTCCACCACCTTTCCAGTGCGGTCC
AACAGAGCTACCCTGTTGTGCTTTTCCTAGACCTTTTTGTGGCCAGGGCTTTTTATGACC
CTTACCCATTTCTGCCCTGGTCGGTTCCCAACTATAATCTACTTCTCTGTAGTTTTTCTG
CCATTGCTTACACAAATGAAGAAAATCAATTCTTGGATTATCTGCAAATACGTCTGGATG
CAATTCAATCGCAGATACCGGCTTGTGTTCAACGCTCGTGTAGGAATCCAAAAATACACG
AACAGGCATACGATGACGTGAACAGTCTTTGACTTGTCGAACGATTGGGCATTCTTCTGG
TACTTTGAAGTTAACTGGTTTAGCGGGTTCTGCTTTGTGTCTATCGAATCCAAGCATCAC
TATATTGTGAGGCCGCTTTTTCTCCTTTCCTGTGGGACTCTCTGACATGTGCCTTGAAAT
TATTCTCTGACATATATTACGCAAACTTATACTGCGCACGGAAATCATCTTTTTCTATAT
TTTATTTTGATCGTTAACAAAATAGATAAAGTTGATCT
| Gene3D |
Ankyrin_rpt-contain_sf (IPR036770) - T[16-182] 1.3E-10 |
| PANTHER |
TRPC_channel (IPR002153) - T[37-932] 3.1E-104 |
| CDD |
Ankyrin_rpt-contain_dom (IPR020683) - T[58-162] 1.17506E-5 |
| SUPERFAMILY |
Ankyrin_rpt-contain_sf (IPR036770) - T[59-197] 2.27E-9 |
| SMART |
Ankyrin_rpt (IPR002110) - T[87-116] 2.1 - T[142-172] 43.0 |
| Pfam |
Ion_trans_dom (IPR005821) - T[522-796] 1.8E-9 |
| PRINTS |
TRPC_channel (IPR002153) - T[768-789] 6.1E-6 - T[790-803] 6.1E-6 - T[818-831] 6.1E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TRPC5_HUMAN | 25.32 % | 134 | 7.45E-32 |
| TRPC1_HUMAN | 24.901 % | 84.7 | 1.15E-16 |