- Transcript 'Haaura.CG.MTP2014.S4...' >
- Transcript 'Phfumi.CG.MTP2014.S2...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S25.g08657.01.t
Possible name(s)
ABCC1; ABCC10
Gene model
Location
S25 [105,508 / 116,806]
Amino acid sequence
Length: 1,556
>Harore.CG.MTP2014.S25.g08657.01.p
MGFDRVISEYCGKNLSVFDSDVPAFSMCFQSLAFVTLPFMLLAGTSAYFIGRLQIPDVKT
GEPTIYKIRKISTAIALFLQSANFFLTFLSQDNAVYAHDMQSYALSSISLLVHEIFLFRL
SKVHFQYKRGPLIISASWILTFPYFLSHLQFIVASVFVSSNKFLILQLVSSCVSCLAQLA
YLITLLLPNSNYMVVNLVESGKDEVSEETQTLLAIESHSSSYFDISSRLQDSLNERCPAD
SANMFSRLLFLWVGPLMKKGSKSLLVNEDSVYHLPADINTSKLDNQFSDCLNATYISGIN
RIRGQNSFFLLKSLHKSFGAIYYASGLLKLFSDSLAFAGPLLLNRLVNFIENGDEPTVHG
YYYAAGLFLSTLLSSLFSTHFDYQVNKVKLRARSALMTTIYSKTLQAEPCELSQYSTGEI
TNFMSTDVNRVINFCPSFHQFWSLPFQVAVTLFLLYQQIGILFLTSVGLAVFMIAFNQYL
ATKILKYNTYMMEHKDSRVKLITEILLGIRVIKFNAWESFLSEKLKRIRRNEIKNLKGIK
YFDAGCVYLWATTPILISLLTFSTYSVTGHDLTAAKVFTVIALINMLISPLNAFPWVLNG
LMETLVSLRRLNKFLQLKNFDLENYYDAPESINTDDMDVVIEIRNGRFSWDQSVEDLDTI
VDSVQSDDEKNQGLDDISIKIREGQFVGVIGTVGSGKSSLLSAFVAEMRRLNGKIYVDCI
NDGFGLVSQEPWIQHASLRDNILWGKPYNNHHYDAVVEACALVEDLQILPQGDNTEVGEN
GVTLSGGQKARLALARAVYQEKSLYLLDDPLAAVDQHVATHLHDRCIVGELAEKTRILCT
HHTKYLRHADFIIVMENGRIKETGTPERILKYSSLPVRKQVAKQKTVTSKEAQPCGTEDV
ECILSNNKDALMMEEERAVGTVAFHVYRSYWTAIGSFLASLILLFLFLMQGSKVVSDWWL
SYWVTNIKNDDNSSYYHDMPFSSTINWTSNSDQLERSWCFPQPLVLSETSYTGLLAADVK
ANTTSHDVMWYLMIYGCLAASNSLFTLLRAFLFAYGGIRAAQVFHNSLLKTVLKAPISFF
DVTPVGRVINRFSSDTYSIDDSLPFILNIFLAQFVGVLGTLVVTVYGLPWFALVLLPLAV
FYYYIQYYYRLTSRELKRLSSVSLSPIYAHFTETLSGLFTIRAFRKNEMFRNKNLRLVDQ
NQRCNFSTLAAQEWFGIRLQMIGVAMVTGVAFVTVFMHSSHKVSPGLAGLALSYALSVTG
RLYGVITSFTETEKQMVAVERQAYYINNIPKERETIDNGHLITNGGPSKEVIRFSDVSLQ
YREGLPLALDNVSFTIEKGEKIGIVGRTGSGKSSLFMLLFGMVEPCNGSIMINGTNIKRS
SLMSLRSILSIIPQDPFLFSGSLRENLLPNLEDVNEEHEASLWSALERCNLHEKVVEMGG
LSSNAGERGRRLSVGQRQLLCLARALLTDAKIICLDEATANVDRKSDEVLQKVIREQFEG
RTVLTIAHRIETVLHCDNVLVLDEGRVAEFGPPGTLLSNTDSMFYKLSSSGGGNIN
Nucleotide sequence
Length: 7,339
>Harore.CG.MTP2014.S25.g08657.01.t
ATATATTAGTTATGTGCCATTACTGCAAGAATCTGCCAAAGACCATATTCTAGGACCATC
CTAATCTACTACCAAGGACCGCAATCATGGGTTTTGATCGAGTCATCTCAGAATACTGTG
GGAAAAACTTGTCTGTGTTTGACTCAGACGTACCTGCATTTTCCATGTGTTTCCAATCGC
TGGCCTTTGTCACCCTGCCCTTCATGCTGCTGGCTGGAACAAGTGCATATTTCATTGGGC
GTCTTCAGATTCCTGATGTGAAGACGGGAGAACCAACTATCTACAAGATCAGAAAAATTT
CTACAGCAATTGCTCTGTTTCTGCAGAGTGCTAACTTTTTCTTGACGTTCCTTTCTCAAG
ATAATGCAGTATATGCTCATGACATGCAGTCCTATGCCCTATCATCGATATCTCTACTGG
TGCATGAGATTTTTTTATTTCGATTGTCAAAAGTCCATTTTCAGTACAAGAGAGGACCGC
TTATAATCAGTGCCTCATGGATTTTAACTTTTCCCTACTTCTTATCACACTTGCAATTTA
TAGTTGCATCTGTGTTCGTAAGTTCCAACAAATTTTTAATACTTCAGTTGGTGTCTTCTT
GTGTCTCATGTTTGGCACAATTGGCCTATTTAATAACATTGCTGCTGCCAAACTCCAATT
ACATGGTGGTAAATTTGGTTGAAAGTGGCAAAGATGAAGTTAGTGAAGAAACACAAACTC
TCTTGGCTATTGAAAGTCACAGTAGCAGCTATTTTGACATATCTTCTCGTCTACAAGATT
CCCTTAATGAGCGGTGTCCTGCTGACAGCGCGAACATGTTTTCTAGACTCTTGTTTTTGT
GGGTTGGGCCGCTAATGAAAAAGGGATCCAAATCTCTACTTGTGAATGAAGACTCAGTGT
ATCATCTTCCTGCTGACATAAATACCTCAAAATTGGATAATCAGTTTTCAGACTGCCTCA
ACGCAACATACATTTCTGGAATAAATAGGATTCGGGGTCAAAACAGTTTCTTCCTATTGA
AATCTTTGCACAAATCATTTGGTGCTATTTATTATGCATCTGGACTATTAAAGCTGTTTT
CCGACTCTCTGGCCTTTGCCGGGCCATTGCTGTTAAACAGACTGGTTAACTTCATAGAAA
ATGGTGATGAACCGACTGTTCATGGATACTATTATGCGGCTGGTTTGTTCCTGTCAACTC
TGCTTTCATCTCTATTCTCAACTCATTTTGATTACCAGGTGAACAAAGTGAAGCTTAGGG
CTAGATCAGCCTTGATGACCACCATATATAGCAAAACCTTGCAGGCCGAACCATGTGAAC
TTTCCCAATACAGCACGGGAGAAATCACAAATTTTATGAGTACTGACGTCAACCGTGTTA
TAAATTTTTGTCCGAGTTTTCACCAGTTCTGGAGTTTGCCTTTCCAAGTTGCAGTCACTT
TGTTTTTACTTTACCAGCAGATTGGAATTCTTTTTCTGACAAGTGTTGGCTTGGCTGTTT
TTATGATTGCCTTCAATCAGTATTTGGCCACAAAGATTTTGAAATACAATACTTACATGA
TGGAGCACAAGGATAGCAGAGTAAAGCTGATAACAGAGATCTTACTTGGCATTCGCGTTA
TAAAGTTCAATGCATGGGAATCTTTCCTCAGCGAAAAATTAAAGAGAATAAGACGAAATG
AAATCAAGAACTTGAAAGGCATCAAATATTTTGATGCAGGTTGCGTTTATCTCTGGGCAA
CAACACCAATCCTCATATCCCTCCTGACTTTCTCCACATATTCAGTAACGGGACATGACT
TGACTGCTGCGAAGGTATTCACTGTAATTGCCCTCATTAACATGCTTATCTCACCCTTGA
ATGCATTCCCATGGGTGCTAAACGGACTTATGGAGACTCTCGTGTCTCTTAGAAGACTTA
ACAAATTTTTACAATTAAAAAACTTTGATCTGGAAAACTACTATGATGCTCCTGAGAGTA
TCAACACTGATGATATGGATGTAGTGATCGAGATTCGGAATGGAAGATTCTCTTGGGATC
AATCTGTGGAAGACCTGGATACCATTGTTGACAGTGTACAATCTGATGATGAAAAGAACC
AAGGACTTGATGACATATCAATAAAAATACGAGAAGGTCAGTTTGTTGGAGTAATTGGAA
CTGTTGGCTCTGGAAAAAGCTCTCTTTTATCTGCTTTCGTTGCGGAAATGAGGAGATTGA
ATGGGAAAATTTATGTGGATTGCATTAATGATGGATTTGGCTTGGTCAGCCAGGAACCCT
GGATTCAGCATGCCTCTCTCAGAGATAACATACTGTGGGGAAAACCATATAACAATCACC
ATTACGATGCAGTTGTCGAAGCTTGTGCTCTTGTTGAAGACCTGCAAATTTTACCACAGG
GTGACAACACTGAAGTTGGTGAGAATGGTGTTACATTAAGTGGAGGTCAGAAAGCAAGGT
TGGCTCTTGCAAGAGCAGTTTATCAGGAAAAGAGCTTGTATTTGCTTGACGATCCACTAG
CTGCAGTGGACCAACATGTGGCCACCCATTTACATGACAGATGTATTGTTGGTGAACTGG
CAGAAAAAACCAGGATATTGTGTACACACCACACAAAATATCTGCGTCACGCCGACTTCA
TAATTGTAATGGAAAATGGGAGGATCAAAGAAACAGGAACTCCTGAAAGAATACTCAAGT
ATTCCAGTCTTCCCGTCAGAAAACAAGTTGCAAAACAAAAAACAGTTACTTCTAAAGAAG
CACAACCATGTGGAACTGAAGATGTTGAATGTATCCTCAGCAACAACAAGGATGCTTTGA
TGATGGAAGAAGAGAGAGCTGTTGGGACTGTTGCTTTCCATGTGTACCGTTCCTACTGGA
CTGCAATCGGTTCATTTCTTGCATCACTGATATTGTTATTTTTATTTTTAATGCAAGGTT
CAAAGGTCGTATCAGATTGGTGGTTGTCATACTGGGTTACCAATATCAAGAATGATGATA
ACTCTTCATATTACCATGACATGCCTTTTTCCAGTACAATTAATTGGACTTCTAATAGCG
ATCAGTTGGAAAGATCTTGGTGTTTTCCACAACCATTAGTACTATCTGAGACATCATACA
CTGGATTGTTAGCTGCAGATGTGAAAGCTAATACCACAAGTCACGATGTCATGTGGTATC
TCATGATTTATGGTTGCTTAGCTGCCTCAAATAGTTTATTCACTCTACTGAGAGCTTTTT
TATTTGCTTATGGTGGAATCAGAGCTGCACAAGTTTTTCACAATTCTCTGTTGAAAACTG
TCTTAAAAGCACCTATATCCTTCTTTGATGTGACCCCTGTCGGACGAGTAATCAATCGTT
TCTCTAGCGATACTTACAGCATAGATGACAGTCTGCCATTCATCTTGAACATTTTCCTGG
CTCAATTTGTTGGCGTTTTGGGAACTCTAGTTGTCACTGTCTATGGCCTTCCCTGGTTTG
CTCTCGTGTTACTGCCACTTGCTGTGTTTTATTATTATATTCAGTATTACTACAGACTCA
CATCAAGGGAACTGAAAAGATTGAGCAGTGTAAGCTTGTCACCCATATATGCTCATTTCA
CCGAAACTCTCTCCGGTCTCTTTACCATACGGGCTTTCAGGAAAAATGAAATGTTCAGGA
ATAAAAATTTGAGGTTAGTAGACCAAAATCAGCGATGTAATTTTTCCACTCTCGCAGCTC
AAGAATGGTTCGGAATTAGGTTACAAATGATCGGAGTAGCTATGGTAACAGGTGTTGCTT
TTGTCACCGTGTTCATGCATTCCAGTCACAAGGTCTCACCAGGCTTAGCTGGATTGGCAC
TCTCATATGCACTATCCGTCACTGGTAGATTGTACGGTGTGATTACTTCATTCACCGAGA
CTGAAAAGCAAATGGTTGCGGTAGAACGGCAAGCCTATTACATAAATAATATTCCAAAGG
AAAGAGAAACTATTGACAATGGGCATTTGATTACCAACGGCGGACCCTCTAAAGAAGTCA
TTAGGTTCTCTGATGTGAGTCTGCAATACAGAGAAGGCCTGCCTCTTGCTCTGGATAATG
TGTCTTTCACTATAGAAAAAGGAGAAAAAATTGGAATAGTTGGAAGAACAGGGAGTGGAA
AATCCAGCTTGTTCATGTTGCTATTCGGAATGGTCGAACCATGTAACGGTTCAATAATGA
TAAATGGGACGAATATCAAAAGAAGTAGTCTAATGTCATTACGGTCTATTTTATCCATCA
TTCCCCAAGACCCATTCTTATTCAGTGGCTCTCTACGAGAAAATTTACTGCCAAACTTAG
AAGACGTTAACGAAGAACACGAGGCTTCGTTGTGGTCAGCCTTGGAACGTTGTAATCTTC
ATGAAAAGGTGGTAGAGATGGGTGGATTATCCAGTAATGCTGGGGAGAGAGGCAGGCGAT
TGTCAGTTGGCCAGAGACAACTGCTTTGCCTTGCTCGAGCACTACTCACTGATGCAAAGA
TCATATGTCTGGATGAAGCTACAGCAAATGTCGATCGCAAATCTGATGAAGTTTTGCAAA
AAGTAATCCGAGAACAATTCGAAGGCAGAACAGTACTTACAATTGCTCACAGGATCGAGA
CCGTTTTGCACTGTGATAACGTGCTGGTACTGGACGAGGGTCGTGTGGCTGAATTTGGAC
CACCTGGGACTCTACTAAGTAACACCGATTCGATGTTTTACAAACTTTCCAGCTCGGGAG
GTGGAAATATAAACTGAATTATTTGTCCAGCATGCCAAGGTACAGAAACTATCGTTAAAG
GTGTTAATACTATTCTGAGGTTTCCATTCACATGAACAATACTAGATCTTAGAAACACTG
AATCATCCATCCATTCATTAATACAAACAAGTAATACCATAATAAATAATACCACGCATG
ACTATTGACACCGAATTAAGGTGTGGTCAAGTTCTTTACAGTGTAAAATACAACGATCAG
TCACTTTATGTTCTTATCCTGGCTTTAAGTATAGGAATTGCTTCACAACTGTATTTAATC
ATGTACATTATTTATATATATATTTTTTGTGGCTTTTCAACTATCATTCAGTCTTGTCTC
AAAATCCTACCTAGAAGTGGTACAACAGTTTTTCTCAGAAGAGCATTAAGAGGAATTATT
TTTATTGAAAAATATACTTTTAAGAACTAAAATAAATAACGAAAACATTCATTGTTGCAA
TAAAAATCTCACGAAAGATAAATCTATGTTGCGCCCTCCTCTGGTTCTGAATCTTATATT
GCAGTTATATATAGATGTGAAATTACATAGTGATTGCTAGTGATTATGCAGTTGCCTACT
AGTATTCAAACTTGTTATAGTTACCATGAATACGGAAAATTTGAATGAGACTTTTACAAT
GATATCTTCCATATTTATGCTAAGAATGTATATGGGCTAAAACTAATTAGTTAGTTAATT
AGCAAACTTGAATTATCTTTGTTAATATACGACCTAGGAAGTATGTATATCGGTGGGATA
GGTGGAATGGTCGACCAACCTGAGAACCATATAATTGAATCTTGCCTCTGACTATCATAC
TTACTTTCTGTTTGCATAAGGAAGTTGTTTCTTTATACTCCTTATCCCAATCAACCCATT
TCTACAGATGGTTGTGGGGAGACAGATGGTGTATATAAAACATTTCCATCATCAACGAAT
GCTTCATTATTATTTTCAACATTCGACTCTGTCCCTATGGGTTTGACTTTGTTGGTCTGT
CGTTTTTTCTTTTTTTTCTTCCGAGGTTTCTTTCCCGATTCCGTCGCCCATGTTTGATGT
TCAACTGTGTTCTCCGTAACTATGTTCTCTTTGCCATTGCTCTGAGCTGAAGACGGTCTT
ATATCAGTTACAGCAACAAAATGTTTATTATCCAAATCTACATTACTTCCAAGAGGTGTG
TGTATTGATGTGGGCTGTTTGGGAGAGCCTCCACTCTGAGCTGAAGACAGTCTTCTATTA
GCTATAGCTACAAAATGTTCATTACCCAAATCTATATTGCTTCCAAGGGGTGTGTGAATT
GGTGTAGACTGTGAAGGAGTGGGATTTTTCATTCTGGTATCAGTTATTTTATTTTTTCCA
TCCTCAGAATCAGAAGCTTCTTGCTGAACTGATCCCGGAAGAGGAGAATCGGCAAACCTC
ACAGAATCATCTTGAAACCAATCGGCGGATTCTTCGTTAACCTCTTCCCTTACAATGTTG
CTCATATCTGGTGTCAACTTTGATTGGGATATTTTAACTTGAGCCAGCTCACCATCAAGG
TCTGTTTTCGACTCTCCTATAACTCCGTCTTTTAATACAGGACTGTTAGGATGATCATCG
CATCTTTGATCAATTTTGTCTCCAGAATTTTCTAGTCTATTTCGTTCTTCTCGTATCCTT
TGAACTCTTTCCATGCGCTCCCGTCTGTCTTGTGCTTCCCTTTCTTTCTGTTTCTCTACA
TCATTATTAACGCGTTCTTGAATCTTTTCAAAATTGTTACCAATCATGTCGAGCAGCCAC
GTAAAACCATTTTTTATACCTCTGTCGACCTTGCGTTTCTTCAGCTTGCTACGCTTCATC
GGCAATGCAGAACACAGCACGAGTTTACAAAAGCATTCATTCCTGTTGGCAATTTCCTCC
AAGTTCAAGCGTACGCAGATATCATTTTCAGATAACGCCACTGGCTGGTCTTGTTTGTTG
GCTAGTATTAAAACAGGTTTTCGTTTAATTCTTTCATCGCTCAGTAAATTCTCTATAATG
ATCCGACATTCGTCCATACGATCCAAATCCGAGGAATCAACAACGAAAATTAGGCCATGG
GTTTCAGCCATGTAATTGTGCCATATTTCTCGGATTCGTTCCCCGCCACCCAAATCCAAG
ATCTTAACATTGAATCTGCCTGAGTGAAGGTCGATCATAGAAAATCCGACAGTAGGTGCA
ATATCACTAAGATCGCCTTTCAACTGATGCTGCACCGTCGTCGTTTTCCCAGCGTTGTCA
AGCCCTACTGTTAAGATGGTGACGCTCAATCTCGTTCTCTTTTTACTCTTGGCCCATGCT
GCACAATTACCCATGAGGCTGAACATAATATTTCAACTTCTAGAATTCGTTAGCTACTCG
CCAATGAAGGCGTTCACGGTTTTGAAGTTCCAATAAAAGTTTCGGAATTGCGTTGCAATG
GCTGGATACATATGGCGTTGTCATAAACAAAGCTGTAGTGACTACTCATGCTTGAAATTC
CATGGTGCGTAGCGGTTATGGTTCTCAGTCTTTAGATTGATCCCATCATACTAAATATTG
CAGCAGCAATCTTGACGCA
| Gene3D |
ABC1_TM_sf (IPR036640) - T[310-617] 9.5E-28 - T[1003-1293] 3.1E-44 |
| SUPERFAMILY |
ABC1_TM_sf (IPR036640) - T[313-621] 3.92E-37 - T[939-977] 4.58E-58 - T[1023-1292] 4.58E-58 |
| ProSiteProfiles |
ABC1_TM_dom (IPR011527) - T[324-603] 35.733 - T[941-1274] 41.762 |
| Pfam |
ABC1_TM_dom (IPR011527) - T[325-591] 7.3E-27 - T[941-1259] 1.8E-44 |
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[654-882] 21.715 - T[1312-1549] 21.129 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[667-873] 1.01E-51 - T[1309-1547] 1.33E-68 |
| Pfam |
ABC_transporter-like (IPR003439) - T[674-811] 3.0E-19 - T[1329-1480] 9.0E-33 |
| SMART |
AAA+_ATPase (IPR003593) - T[683-859] 6.8E-12 - T[1338-1526] 1.5E-10 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[784-798] . - T[1452-1466] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MRP1_HUMAN | 32.211 % | 747 | 0 |
| MRP3_HUMAN | 34.399 % | 746 | 0 |
| MRP7_HUMAN | 46.113 % | 1073 | 0 |