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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C5.191.v2....'
  2. Transcript 'Phmamm.CG.MTP2014.S1...'
  3. Transcript 'KH2012:KH.L18.90.v1....'
  4. Transcript 'KH2012:KH.L170.28.v5...'
  5. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S25.g11189.01.t

Possible name(s)

MRPL4

Location

S25 [62,347 / 63,307]

Sequences

Amino acid sequence

Length: 319

>Harore.CG.MTP2014.S25.g11189.01.p
MISVRSISLRNICQRIISRHMSESPTGKEKKRPHNIVMLGFDRHKAEPAKPVNFKVPEEC
PIVRQVKDCSRHRMPVRVFLDSYTSVEHKPVSAIELHPDVFADNPRIDFLHLCKQWQKNY
REVDYSWEPTRAEMGKGHKKPWPQKGLGKAQQGSSVGPHWKGGGIAHGPRGPKALYQEIL
PNVRLRSLTSALSIKYFQEDLFVLKDFEIPSAEQSYLENVLAARGMESKSVLLVFTEKDN
VKEADNICSAVKSWPQVNLIPLVGLNMWSILKHFKLVLTLSSVEELETKILWEKQRYDWI
DKPHNFYRDLPFEINNNVE

Nucleotide sequence

Length: 960

>Harore.CG.MTP2014.S25.g11189.01.t
ATGATTTCCGTGCGCAGTATAAGTTTGCGTAATATATGTCAGAGAATAATTTCAAGGCAC
ATGTCAGAGAGTCCCACAGGAAAGGAGAAAAAGCGGCCTCACAATATAGTGATGCTTGGA
TTCGATAGACACAAAGCAGAACCCGCTAAACCAGTTAACTTCAAAGTACCAGAAGAATGC
CCAATCGTTCGACAAGTCAAAGACTGTTCACGTCATCGTATGCCTGTTCGTGTATTTTTG
GATTCCTACACGAGCGTTGAACACAAGCCGGTATCTGCGATTGAATTGCATCCAGACGTA
TTTGCAGATAATCCAAGAATTGATTTTCTTCATTTGTGTAAGCAATGGCAGAAAAACTAC
AGAGAAGTAGATTATAGTTGGGAACCGACCAGGGCAGAAATGGGTAAGGGTCATAAAAAG
CCCTGGCCACAAAAAGGTCTAGGAAAAGCACAACAGGGTAGCTCTGTTGGACCGCACTGG
AAAGGTGGTGGAATAGCACACGGGCCTCGAGGACCCAAAGCGCTTTATCAAGAGATATTG
CCCAATGTACGACTTCGCTCTTTGACGAGTGCTCTGAGCATCAAGTACTTTCAAGAAGAT
CTGTTTGTTTTGAAAGACTTTGAGATACCTTCCGCAGAACAAAGCTATCTAGAAAATGTA
TTGGCTGCTCGAGGCATGGAAAGTAAGTCGGTGTTGCTGGTGTTCACAGAGAAAGACAAT
GTCAAGGAGGCGGACAATATATGTTCTGCAGTGAAGTCATGGCCCCAAGTAAACTTGATT
CCCCTTGTGGGCCTCAATATGTGGAGCATTCTCAAACATTTCAAGCTTGTATTGACACTG
TCATCGGTAGAAGAGCTGGAAACAAAAATTTTATGGGAAAAACAAAGATACGATTGGATT
GACAAGCCACATAACTTCTATCGTGATCTGCCATTTGAAATCAATAATAATGTTGAATAA

InterProScan

Gene3D
Ribosomal_L4_dom_sf (IPR023574) - T[61-311] 1.9E-58
PANTHER
Ribosomal_uL4/L1e (IPR013005) - T[79-309] 4.5E-58
SUPERFAMILY
Ribosomal_L4_dom_sf (IPR023574) - T[84-290] 4.58E-46
Pfam
Ribosomal_L4/L1e (IPR002136) - T[94-288] 8.3E-42

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RM04_HUMAN 41.797 % 194 5.7E-60