- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S262.g00806.01.t
Possible name(s)
GSPT1; GSPT2; HBS1L
Gene model
Location
S262 [71,320 / 74,793]
Amino acid sequence
Length: 581
>Harore.CG.MTP2014.S262.g00806.01.p
MTMNGENVPEAWDQDMDLKLGALNVNARPFVPNIGAAEFVPSFKKPATNPVPPEAAATAS
PQNVSPEVPRQGDASEGAVGGKESSCEESTQLVENTVSDPSELSSQNQNDDELAQTTENV
PKEDIVRQEEEEEEEPSEDMQFVEKTVFVSSSEKKKDHLNVVFIGHVDAGKSTIGGQIMY
LTGMVDKRTLEKYEREAKEKNRETWYLSWVVDTNQEERDKGKTVEVGRAYFETESKHFTI
LDAPGHRSFVPNMIGGTSQADIAVLVISARKGEFETGFERGGQTREHAMLAKTAGVKHLV
VLINKMDDPTVSWSLERFEECKEKLTPFLKKVGFNPKKDIHFMPCSGLTGANLLHADDNH
KDWYDGLPLIPYLNSLPTMERSGEGPIRVPIVDKYKDMGTLVLGKLESGTLEKGMHVIMQ
PNKRKVKILSILSDDVETDEANAGENVKLRLDNIEEDEVSKGFVLCSVDNLCSTGCLFDA
QIVIIEYKSIICAGYSAIMHIHTCIEEVEIRQLLCLVDRRTGDRQRGRPKYVKQDQIVIA
RLQTSGAICIESFKNFPQMGRFTLRDEGKTIAIGKVLKVLE
Nucleotide sequence
Length: 2,690
>Harore.CG.MTP2014.S262.g00806.01.t
AGGATATCGAGTAATAAGTGTAGCTACTCGTTACACGTTGACATATTCTTTTGAAATCAT
CGATAATTGATCTGTGTGATAGAATCTAAATATAAAAGACGACGATACTAATGACAATGA
ATGGGGAAAACGTTCCAGAGGCGTGGGATCAAGATATGGACTTGAAACTCGGTGCTTTGA
ATGTGAACGCTAGGCCATTTGTTCCCAATATTGGTGCGGCAGAATTTGTTCCGTCATTCA
AAAAACCAGCTACAAATCCAGTGCCACCTGAAGCTGCTGCTACCGCTAGTCCGCAAAATG
TTTCACCTGAAGTGCCACGGCAGGGGGATGCTTCTGAAGGAGCTGTAGGTGGTAAAGAAT
CGAGTTGTGAAGAAAGCACACAGTTAGTAGAAAATACAGTATCTGACCCTAGTGAGTTGT
CGTCACAAAATCAAAACGATGACGAACTAGCTCAAACAACTGAAAATGTCCCAAAGGAAG
ATATAGTCAGGCAGGAAGAGGAAGAGGAAGAAGAACCCAGTGAAGATATGCAATTTGTTG
AAAAAACAGTGTTCGTTTCCTCTAGTGAAAAGAAGAAGGATCACTTAAATGTAGTTTTTA
TTGGGCATGTAGATGCGGGAAAATCAACTATTGGCGGGCAGATCATGTACTTGACAGGAA
TGGTAGACAAACGTACTCTGGAAAAATATGAAAGGGAGGCGAAGGAGAAGAACAGGGAAA
CGTGGTACCTCTCGTGGGTTGTGGACACAAACCAAGAGGAACGGGATAAGGGCAAAACCG
TAGAGGTCGGCCGGGCGTATTTTGAGACTGAAAGTAAACACTTTACGATCCTCGACGCGC
CTGGACATAGAAGCTTTGTGCCGAATATGATAGGTGGGACTTCGCAAGCCGATATAGCAG
TCCTGGTTATATCAGCGAGGAAAGGCGAATTTGAGACGGGATTTGAGAGAGGTGGGCAAA
CGAGAGAACATGCTATGTTAGCAAAGACTGCCGGAGTGAAACATCTTGTAGTACTGATCA
ACAAAATGGATGATCCAACAGTATCCTGGAGTTTGGAAAGGTTTGAAGAATGCAAGGAGA
AATTGACACCGTTCTTGAAGAAAGTCGGTTTCAATCCAAAGAAAGACATACACTTCATGC
CATGTTCTGGTCTTACTGGAGCCAATTTGCTGCATGCAGATGATAATCATAAAGATTGGT
ACGATGGCTTGCCGTTAATTCCGTATTTGAACAGTCTTCCAACGATGGAACGCTCAGGAG
AAGGTCCGATTCGTGTTCCCATTGTCGACAAATATAAGGATATGGGAACGTTAGTTTTGG
GCAAACTCGAATCAGGAACATTAGAAAAAGGAATGCATGTAATCATGCAACCAAACAAAA
GGAAAGTTAAAATATTAAGCATTCTTTCTGATGATGTTGAAACTGATGAAGCGAATGCTG
GAGAAAATGTTAAACTACGACTTGATAACATTGAAGAAGATGAAGTATCCAAGGGATTTG
TTCTGTGTTCAGTTGACAACTTGTGCTCAACAGGCTGCCTCTTTGATGCACAAATAGTGA
TAATAGAATATAAGTCTATCATCTGCGCTGGTTACAGTGCCATAATGCATATTCACACGT
GTATAGAAGAAGTGGAAATAAGGCAATTGCTGTGTCTTGTTGATAGGCGAACAGGTGATA
GGCAGAGAGGGAGACCAAAGTATGTTAAACAGGACCAGATAGTGATTGCACGATTACAGA
CGTCCGGAGCAATATGCATCGAAAGCTTCAAAAACTTTCCACAAATGGGACGCTTCACGC
TTCGCGATGAAGGGAAAACCATTGCTATCGGCAAGGTCCTAAAGGTACTCGAATGAGCAG
GTGCAATTTGACCGGTCAATTATGCCAACAACCTTAAAAACTATAATGCATCGAAATTTC
GTGAATCCAGTCGAATCACAATCGGTATTTCTCTTTACTTGTGTTCAATTCTCCAAGTCT
TCTGGTATACTGCACCGTAACAGATCTATTGGTAGTAACTTAGCTCTTTCTATAGAAACA
TTCAAGCATTGGACCTCCGTTGACATCCTCAATATATCGTAATAATTCTAACGTCATCGG
GTCTTTTTGTCTCGCTTAATAATTTCAATCGAATCAACTTATTTATTGTGTATTATGTAA
ATTAGACAGCAGCTACATTAATGCTTGTTGATATTTGTGACTGCTTTCAGTATTGGGATA
AAATAGTAATCTGTTTCCAAAGTGGTTGCTTTTACATTACTAATTATGCAATGTTAGTGT
CTCATAACATCTGATTGTCTACTAGCATATTTTGACTTGAAACTTGGCAAATGCGAGAAA
TTTCATGGAGGCTTTTGATGCATTCCTCTGTATTTCCATCTGCTCAGTGTCAGTATTATG
GAAATATTACCTCTAGGTTGTCCAGAGCCTTTTGTCACAACATGCTTCTGAAGTCGCAAT
TGCTGCTTATAACACGTTGGTGAGCCAGCAGCATTTATGTGTCATAAAAATTTAGTAGTA
CCTTCTTTCGCATACTGGCATCCTATTGTTCTATTCTTTTTTTGAATTTGTGGTGTTTGG
ATATCGGTCCGGTGCATGAAACATGTGAGTTTAAAGTGTTTTGATGTCTAATATTCCATG
TTTATCAGTACGGTGACAGTTGTTTCGAATAAATACTTGCAACCCGTGAA
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[146-355] 1.78E-61 |
| ProSiteProfiles |
TF_GTP-bd_dom (IPR000795) - T[156-384] 54.983 |
| Pfam |
TF_GTP-bd_dom (IPR000795) - T[156-353] 3.1E-45 |
| PRINTS |
TF_GTP-bd_dom (IPR000795) - T[160-173] 5.6E-16 - T[219-227] 5.6E-16 - T[239-249] 5.6E-16 - T[255-266] 5.6E-16 - T[299-308] 5.6E-16 |
| ProSitePatterns |
G_TR_CS (IPR031157) - T[212-227] . |
| SUPERFAMILY |
Transl_B-barrel_sf (IPR009000) - T[380-471] 9.77E-22 |
| Pfam |
EFTu-like_2 (IPR004161) - T[399-466] 9.2E-10 |
| SUPERFAMILY |
Transl_elong_EF1A/Init_IF2_C (IPR009001) - T[478-580] 4.11E-29 |
| Pfam |
Transl_elong_EFTu/EF1A_C (IPR004160) - T[478-579] 2.2E-28 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HBS1L_HUMAN | 39.767 % | 335 | 1.02E-106 |
| ERF3A_HUMAN | 76.606 % | 712 | 0 |
| ERF3B_HUMAN | 63.937 % | 741 | 0 |