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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S266.g03978.01.t

Possible name(s)

LIPF; LIPK; LIPN

Gene model

Harore.CG.MTP2014.S266.g03978

Location

S266 [66,177 / 70,753]

Sequences

Amino acid sequence

Length: 440

>Harore.CG.MTP2014.S266.g03978.01.p
MAGYFLKIALLLLALRAADAGSQNFTKFTKAEEKFWNFAVNLYNHLKPEFENVTCPESPA
ANQEKLSHRAKSDPDITNNATQLIESKGFVSEEHYVTTKDGYILLVLRIYPRNQRPTDRS
KLPIYLQHGLLSSSDCFVNNLRNESLAFILGDLGYDVWLGNVRGNRYSSRHVKMLKEKKK
FWEWSFDEMGKYDMPAIINYVLEVSGHKKLHFIGHSQGNTNLISAVIHYGKEFAQKIDKY
IALAPAIFVGKAKSSIRYLSNAAHAIKTFWDLFENGDFFSHDGFGKFAQNFCPKYPWICE
EVLFTLVGPDCLHYNYTRIPVYFGHAPAGTSTRNIVHWAQQFKAGNHFRFYDFGSFIDNL
IHYGQFHPPEYDLSKFTVPTYMFLGGLDWMVVPEDGRALAKVLPNVQTVKYYPKINHVGF
VWGYDIANTIYRDIIDIIES

Nucleotide sequence

Length: 1,837

>Harore.CG.MTP2014.S266.g03978.01.t
GTATGACCTTTGACACGCAATCAGTCGATACAGAGCGAGTGGTACAACAAGCGTACGACA
ATGCAGATCGTTCGCAAATATTGCATTAACAGTTGTCGACCCGTTTCGTCGTACTAATTC
GAAATAAATGGCGGGATATTTCCTGAAAATAGCTCTACTTTTACTCGCGTTACGAGCCGC
GGATGCTGGTAGCCAGAATTTTACGAAGTTTACAAAGGCAGAGGAAAAATTTTGGAATTT
TGCGGTAAATTTATACAACCATTTGAAACCCGAGTTTGAGAACGTAACTTGCCCTGAAAG
TCCAGCTGCCAATCAAGAAAAATTATCGCACAGAGCTAAATCGGATCCTGACATAACGAA
TAACGCTACTCAACTTATTGAAAGCAAAGGTTTTGTTAGCGAAGAGCATTATGTGACAAC
TAAAGACGGTTACATTCTTCTGGTTTTGAGAATTTATCCACGAAATCAGAGACCTACAGA
CCGGAGCAAACTTCCAATTTATTTGCAGCATGGTCTCTTGAGTTCCTCGGACTGTTTCGT
GAACAATTTGCGGAACGAAAGTCTTGCGTTTATTCTTGGAGATCTTGGTTATGATGTCTG
GCTAGGAAATGTTCGTGGTAATAGATATTCATCGAGACATGTGAAAATGTTGAAAGAAAA
AAAAAAATTCTGGGAATGGAGCTTCGATGAGATGGGTAAATATGACATGCCAGCAATAAT
CAACTACGTTCTTGAAGTCTCTGGTCACAAGAAATTGCATTTTATTGGGCATTCACAAGG
CAACACGAACCTTATATCTGCTGTGATTCACTATGGAAAGGAATTTGCTCAAAAAATTGA
TAAATACATTGCACTTGCACCTGCCATATTTGTTGGCAAAGCTAAAAGTTCTATTAGATA
TTTATCAAACGCTGCCCATGCTATAAAGACATTCTGGGATTTATTCGAAAACGGAGATTT
CTTTTCTCATGACGGATTCGGTAAATTTGCTCAAAATTTCTGTCCCAAATATCCATGGAT
ATGTGAAGAAGTGTTGTTTACATTAGTCGGGCCAGATTGTTTGCATTATAATTATACTCG
TATACCTGTATATTTTGGCCATGCACCAGCTGGTACGTCGACAAGGAACATTGTGCATTG
GGCTCAACAGTTCAAAGCAGGAAACCATTTTCGGTTTTATGATTTCGGATCATTCATTGA
CAATCTCATTCACTATGGTCAGTTTCATCCACCAGAATATGACCTATCGAAGTTCACAGT
TCCAACATATATGTTTCTTGGTGGTCTCGACTGGATGGTTGTCCCCGAGGACGGTAGGGC
ATTGGCTAAAGTCTTGCCCAACGTACAGACAGTTAAGTATTACCCCAAAATTAACCACGT
CGGGTTCGTATGGGGGTACGACATCGCAAACACGATATACAGAGATATAATTGACATTAT
AGAATCTTGATTTATGAAAAAAAAAATATTTTTCCTAGAAATAACATTTATTTATTTTAA
ATTTTAACGCTAATTTAACACTGTCATAATTTCCTTCAAGTTCTTATCGATTCGTTTTAG
TTACGATCCTCGACCTCTGACCTCCACTACCCTGTAATTAGTGTGTTGTATTCAAATAAC
CAGCAGTTCATAAGTTCCCTCAGAAACTTCCCAGATTGAAACTATGTTATGCTTCTTTAT
ACATAACTAGAAATTTTGACACAAATTTTTAATGTTTCATCGGTTGAAACTAAGCTTGCG
TGTCCTAATTGTTCCCCTACGAATTCTAAAGATCTACTACTGTATTTTTTGTAATTATTT
TGATTTACATCCATGACACTATATATATATATATATA

InterProScan

PIRSF
Lipase_euk (IPR025483) - T[19-44] 85.0 - T[53-440] 4.3E-115
Gene3D
AB_hydrolase (IPR029058) - T[66-439] 1.1E-124
SUPERFAMILY
AB_hydrolase (IPR029058) - T[71-439] 1.3E-61
Pfam
AB_hydrolase_lipase (IPR006693) - T[81-140] 2.6E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LIPG_HUMAN 39.459 % 268 4.12E-86
LIPK_HUMAN 39.678 % 269 1.76E-86
LIPN_HUMAN 38.83 % 252 5.12E-80