- Transcript 'KH2012:KH.L92.6.v1.A...' >
- Transcript 'Phfumi.CG.MTP2014.S4...' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S275.g14162.01.t
Possible name(s)
AL691442.1; EFNA3; EFNB1
Gene model
Location
S275 [18,549 / 31,124]
Amino acid sequence
Length: 301
>Harore.CG.MTP2014.S275.g14162.01.p
MERERLIDGLNSSNMSVKVNIGDFMDILCPQTNLGITEKDTPPVKFNLYNVTEDGYKTCN
PEGGKLIFACDKPGQENKLTIKFQTISPSPFGFRFKPCQDYYIIAAPRKDESENTDSRKK
HTCSKTSTRIRIQVGCKGFKKPRTTPTTTTPVTKTSKSIIDRIIDNNKKNIDSKFDNFEK
HLEPVVPEIETVEPEKKIDTEAVAQQSPKDNSSSTTRTNQFTVLLMAMLSSKVNSKGQLL
LPLLRDHRRSLFINTAMICFCSKSFYTLVLVNFTTANHLLKHLTAYMMNYSMEFEPNQWI
R
Nucleotide sequence
Length: 1,644
>Harore.CG.MTP2014.S275.g14162.01.t
AGATTAAAAACAGTTAGTAAGCTATTCTACTTGTGCACACAGCCTCACGGAGTTATCAAG
CGAAATAACAAGCATTAAGGATCTACGAAATCAATAAACCTACAGAAGATATGGATTTGT
ACACGATCTTCATCACCATTGCCACTTTGACTGCAATGTCACATTGTACATTTGCAATGC
AATCTTCAAACAGATATGTTATGTACTGGAATACCTTCATAACACCGACATGGAGCGTGA
AAGGTTAATTGATGGATTAAATTCTTCCAATATGTCGGTGAAAGTGAACATAGGCGACTT
CATGGACATTCTTTGCCCGCAAACCAACCTTGGAATTACTGAAAAAGATACCCCCCCTGT
CAAATTCAACCTTTATAACGTCACTGAAGATGGATACAAGACATGTAATCCTGAAGGCGG
AAAATTAATCTTCGCCTGCGATAAACCAGGTCAGGAGAACAAGCTCACCATCAAATTCCA
AACTATCAGTCCTTCTCCTTTCGGATTCAGATTCAAGCCGTGCCAGGATTACTACATCAT
CGCTGCTCCAAGGAAAGATGAATCTGAAAACACAGACAGCAGAAAAAAACATACCTGCTC
AAAGACCTCAACTCGAATTCGTATTCAAGTTGGATGCAAAGGATTTAAAAAACCAAGAAC
TACGCCAACAACTACAACTCCCGTTACGAAGACATCAAAGTCTATCATTGATAGAATCAT
TGACAACAACAAGAAAAATATCGATTCCAAATTCGACAATTTTGAAAAACATCTTGAACC
AGTTGTCCCAGAAATTGAAACAGTCGAACCGGAAAAGAAAATAGACACCGAAGCAGTAGC
CCAACAAAGTCCCAAAGACAATTCTTCATCCACGACGAGAACCAATCAGTTCACTGTTTT
GTTAATGGCGATGTTGAGTTCAAAGGTGAACTCGAAAGGTCAACTGCTGCTGCCTCTGCT
ACGTGATCACCGTCGTTCGTTGTTCATAAACACTGCAATGATATGTTTTTGTTCGAAGTC
ATTTTACACCTTGGTGTTGGTCAACTTCACCACTGCTAATCACTTACTCAAGCACCTTAC
AGCTTATATGATGAATTATAGTATGGAGTTTGAACCCAATCAATGGATTAGATAAAATTT
TGAAGGTAATATTCAGTAAATGTGGGGTCTCTATACTGATGAGCGATTGGGTGTATTGTA
CGGTAGTTTACATCTTCGAACGAACTCCATTTCCCTCCCTTGTTCACATCCGAATGATCT
AGTGATAAAAGTAGAATTCTTTGGACAGAACAGTTCAAATCCATCTGTTCAACATTAAGT
GTTTTTTTTTTCCAATTTTCGTTCACACTGTGATATAGTTTACCTATATTGTTTTTTTTT
CCTTTCTTTTCGCTCAGTTGGTTCAGTAAAGGTGCCCAAATAGGATAAGGAACAGCATTA
TCATCTGACATTTTGTGATTTGTCAAAGTGAAAATTTCGAAAATTTCAAATAATTCAAAA
ATATTCTCACAAAACAATGTTGCTATTCCACTTGCGATTTATATATTTTTTTTTGATTTT
TTCTTTATCCGTTATAAAGTTTATTTATTTATCATAAAAACTAAAAATCCTTTAAAAAAT
AAAAACAATAACTTACTGATTCAA
| ProSiteProfiles |
Ephrin_RBD (IPR001799) - T[1-134] 39.408 |
| Gene3D |
Cupredoxin (IPR008972) - T[5-145] 4.1E-30 |
| Pfam |
Ephrin_RBD (IPR001799) - T[11-134] 1.4E-32 |
| PANTHER |
Ephrin (IPR031328) - T[11-233] 3.9E-49 |
| SUPERFAMILY |
Cupredoxin (IPR008972) - T[12-136] 5.11E-30 |
| PRINTS |
Ephrin_RBD (IPR001799) - T[16-33] 2.2E-11 - T[44-59] 2.2E-11 - T[78-90] 2.2E-11 - T[91-102] 2.2E-11 |
| ProDom |
Ephrin_RBD (IPR001799) - T[21-135] 3.0E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|