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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S4...'
  2. Transcript 'Phmamm.CG.MTP2014.S2...'
  3. Transcript 'Cisavi.CG.ENS81.R759...'
  4. Transcript 'Harore.CG.MTP2014.S2...'
  5. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S276.g04899.01.t

Possible name(s)

Harore.CG.MTP2014.S276.g04899

Location

S276 [86,242 / 89,553]

Sequences

Amino acid sequence

Length: 437

>Harore.CG.MTP2014.S276.g04899.01.p
MSAAEDKNITVNENNFEDAKIVKWVTSFDEAREIISEFEIMTRTKFIKRWCKAYDIAKSF
IHWEDKTNIPYILLKTTTLECQHAKDRNKERNEKRKQMKGPSQLKSPQAGKKICILGSKK
VDCKATVKIMSVMKFPQYQVEKLTSYTRETTRKLIRKGLDTSSEDLEKLYGCFVIFPTYS
AHTGHVVGQECVKGYNESVPLFLRHRCRKIVKHCMKRFSHTDDMSNETIFQDGTIFYIKN
DTGDVCTVYFGNTDISPKCTCPDFHKHTLPCKHMFAIFKIYPELSEKEMSAVIDNALITN
PSRYEDKQDVNFSQEYKDIVEVVIPDLEGGMGIIDSPYKQSLDKISNLLGQIQSAVSTVT
SEEVLTQTESNLAVILLSLNETAQAETEAKTQKSKRKPVKRRNKDQIEEISQVKFIKVNR
YTKVAYAGTERKNNHIN

Nucleotide sequence

Length: 2,214

>Harore.CG.MTP2014.S276.g04899.01.t
AGCTATTCGACTTGTCAGTAGGACTAATATTAGAGCTAAAACTGGACATTTAACGACAAT
TCTGGATTTCTTTGTTCATTCCTTAAAAAATGAGCGCTGCTGAAGATAAAAACATTACAG
TCAATGAAAATAATTTTGAAGACGCAAAGATAGTTAAGTGGGTTACATCATTCGATGAGG
CAAGAGAAATCATTTCAGAATTTGAAATCATGACGAGAACGAAATTTATAAAACGTTGGT
GCAAAGCATATGATATAGCAAAATCTTTCATTCACTGGGAGGACAAAACGAACATTCCGT
ACATTCTATTAAAAACCACAACTTTAGAATGTCAACATGCAAAGGACAGAAATAAGGAAA
GAAATGAAAAAAGAAAACAAATGAAGGGACCATCACAACTTAAAAGTCCTCAGGCCGGGA
AAAAAATCTGTATTCTTGGTTCGAAAAAAGTCGATTGCAAAGCGACGGTCAAGATCATGT
CTGTGATGAAATTTCCACAATATCAGGTAGAAAAACTAACATCATACACACGAGAAACGA
CTAGGAAATTGATCAGGAAAGGACTAGACACCAGCAGCGAAGACCTTGAAAAACTTTATG
GTTGCTTTGTGATTTTCCCGACATACAGTGCACACACGGGGCACGTTGTGGGCCAGGAAT
GTGTGAAGGGTTACAATGAAAGCGTCCCACTTTTTCTACGGCACAGATGTAGGAAAATAG
TTAAGCACTGCATGAAACGGTTTTCCCATACCGATGATATGTCTAACGAGACAATATTTC
AAGACGGTACCATCTTCTACATCAAGAATGACACTGGTGATGTTTGCACGGTTTATTTCG
GGAACACCGACATCTCACCCAAATGCACTTGTCCCGACTTTCACAAACACACGCTGCCTT
GCAAACACATGTTTGCGATATTTAAAATTTATCCCGAGTTATCGGAGAAGGAGATGTCCG
CGGTTATCGACAATGCTCTGATTACCAATCCGTCGCGATACGAGGACAAACAGGATGTAA
ATTTTTCGCAAGAATATAAAGATATCGTGGAGGTGGTGATACCGGACTTGGAAGGGGGAA
TGGGGATCATTGACAGTCCTTATAAGCAGTCCTTGGACAAGATATCCAACTTGCTGGGGC
AGATTCAGTCTGCCGTATCCACTGTGACTTCGGAAGAAGTTTTGACACAAACCGAATCCA
ACTTAGCCGTGATCCTCCTGTCGTTGAACGAGACCGCTCAAGCGGAGACGGAAGCCAAAA
CGCAGAAATCTAAAAGAAAACCTGTGAAAAGAAGAAACAAAGATCAGATCGAAGAAATTT
CTCAAGTCAAATTCATAAAAGTTAATCGGTACACGAAAGTGGCTTATGCAGGGACAGAGC
GGAAAAATAATCATATTAATTAGACTGAATTTAATTCTATTCTCGATTACACCACAGTAT
AGCTAGGTACTCTAAACAAATTTTAAAATTTTGTCCGAATCCAGGATTTTGAATTCTATT
TCGAAATTAATTCTTATTCATATTTACCTTTCAAAATGTGTTTGATTCGTCAAGTTTGAT
GATCCAGTACATAGCATTATCTGCGAAGACAGAAATATTTAAACTAAGTGTAATGAGGGA
GTTGGACAAGGTATGTTTATATAGCATATAGTGAACTTTGAAGAAAATATTTGATATGAC
ATAGATCGCTGTCTTGTATTGCAATCAATTTAATTTATAGGAAATATTCCAGAGTAATTT
AATTCTATTCTTGAAATAGTGGGTCGAAATTCTCGTCACCTCTTGGATTATGTGATTGAT
GCATTATATGGGTAATCGTTGCATTATTATATTATTTACAAAATATTTCAATGGTGTTAA
TTATAGTCGACAATTACACTTGAAAAACTCTTCTCCAAATGCAATATAAATACAGATTAT
TTGATGTAGCTGTGGTATGGGGCCTACCTCAGTTTTCGAGGGTTCTAATTCGGCCAAGGC
TTGGGATTGAAACTAAAAGAATTGAGATTCATTTGAAAAAGACACCTCCGAACCCCAAAA
AAATGAAGTTGATCGCATACTACAATATAATTATTTTAATTTGTGATGTAACATCAATTG
ATGGACTTAAAATGACCATTCTTCATCATATTCAACAACAAATGGTATTTGAATCATCCT
ATTGAAATAGAAAACAAATTTTTCGAACATTGACATTTAACTTTTTTTTTCCAG

InterProScan

Pfam
CaRF (IPR029309) - T[68-216] 3.3E-20
ProSiteProfiles
Znf_SWIM (IPR007527) - T[244-282] 10.052

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value