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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S4...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  4. Transcript 'Cisavi.CG.ENS81.R759...' > 
  5. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S276.g07161.01.t

Possible name(s)

Harore.CG.MTP2014.S276.g07161

Gene model

Harore.CG.MTP2014.S276.g07161

Location

S276 [81,403 / 85,494]

Sequences

Amino acid sequence

Length: 503

>Harore.CG.MTP2014.S276.g07161.01.p
MAAATTPTSETVFNNSTDGQVTVGETKGTEMGIYNISDITDTTGQKEETLITSMTSWAAS
FDEATDMVKQFEEETKSKFILYWIRSHDISKSKLHWEQNSKMPYLLLKTTALECQHGKDR
NKQTNAKRKMQKSLTEAMSPRSSKITIQASKKTGCKAMIKILDVVKFPQHQVAAITHHKK
KQARNTIMEAIRTEDEKLQKVYGCYVCFPSANAHTGHAIGEEKSDFGYNENVPHFLRHRS
KKVVRHCMRRMACAEEATSDTIYQDDTVFCFKNELDNETSTVYFETADTTPKCTCQDFTR
HSLPCKHMFSIHKIYPDLASREMSVVMDRFESTHKTRKPRVSHHRKLSAGAADKSVAPPL
SYDDGFANNQVLEVVEIGPDEVDEVQNKSDSIQQSITNISSLLPEISNVLYSVNSYHLLE
QTEACLQSVQSNLETIIRNLSEGTRYPTLVNPGEPVLVSPSEVTEDELKRKTCAVDALPR
KAQKYNRYIPGRGLLSVGANVNQ

Nucleotide sequence

Length: 1,512

>Harore.CG.MTP2014.S276.g07161.01.t
ATGGCTGCGGCTACAACTCCGACAAGTGAAACGGTATTTAATAACTCGACTGATGGTCAA
GTTACGGTGGGAGAGACCAAGGGGACCGAGATGGGGATTTACAACATATCAGACATAACA
GACACAACAGGTCAAAAGGAGGAAACCCTTATTACATCGATGACGTCGTGGGCGGCTTCA
TTCGACGAGGCAACAGATATGGTGAAGCAATTTGAAGAGGAAACCAAGTCAAAATTTATT
CTTTATTGGATAAGAAGCCATGACATCTCAAAATCTAAACTTCATTGGGAACAAAATTCT
AAGATGCCGTACTTGCTGCTAAAAACAACGGCGCTTGAATGTCAGCACGGAAAAGATCGC
AACAAACAAACGAACGCTAAAAGAAAAATGCAGAAATCATTAACCGAAGCGATGAGTCCA
CGATCATCGAAGATCACGATTCAAGCGTCAAAGAAAACCGGCTGCAAAGCGATGATCAAA
ATATTAGATGTTGTTAAATTTCCTCAACATCAGGTTGCTGCTATAACACATCATAAGAAA
AAGCAGGCAAGAAATACAATCATGGAGGCAATACGTACTGAAGATGAAAAATTGCAGAAG
GTCTATGGCTGCTATGTATGCTTTCCATCTGCCAATGCTCATACAGGACATGCAATTGGA
GAGGAGAAATCTGACTTCGGTTACAACGAAAACGTACCCCATTTCTTGAGACATCGGAGT
AAAAAAGTCGTGCGACACTGTATGAGACGTATGGCATGTGCCGAAGAAGCCACCAGTGAC
ACTATCTACCAAGACGACACTGTATTCTGTTTCAAGAACGAACTAGACAACGAGACGTCC
ACAGTGTACTTTGAGACCGCAGATACCACGCCGAAATGCACATGCCAAGACTTTACCAGG
CACTCGTTACCGTGCAAACATATGTTTTCCATTCACAAAATCTACCCTGACCTCGCGTCC
CGGGAGATGTCAGTGGTAATGGATAGGTTCGAGTCCACCCACAAAACCAGGAAGCCCCGT
GTCAGCCACCATCGTAAACTAAGTGCTGGTGCCGCTGACAAATCTGTCGCGCCTCCTCTT
TCGTATGACGACGGTTTCGCAAATAACCAGGTGTTGGAGGTGGTCGAAATCGGACCAGAT
GAGGTTGACGAAGTCCAAAATAAATCCGATTCAATACAACAGTCCATAACCAACATATCC
TCACTGCTTCCGGAAATTTCGAACGTTCTATACAGCGTCAACTCGTATCACTTGCTGGAG
CAGACCGAAGCATGCTTGCAGAGTGTACAGAGTAACCTTGAAACAATCATCAGAAATCTC
TCTGAAGGGACTAGATACCCCACGTTAGTTAACCCCGGCGAACCCGTTCTCGTGAGTCCC
AGTGAAGTCACGGAGGACGAACTGAAGCGAAAAACTTGTGCGGTGGACGCTCTACCAAGA
AAAGCTCAAAAATATAACCGATATATTCCGGGAAGAGGGTTACTGTCAGTGGGTGCCAAC
GTGAATCAATAG

InterProScan

Pfam
CaRF (IPR029309) - T[78-225] 6.9E-21
ProSiteProfiles
Znf_SWIM (IPR007527) - T[278-316] 9.668
Pfam
Znf_SWIM (IPR007527) - T[290-308] 0.0011

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value