- Transcript 'Moocul.CG.ELv1_2.S12...' >
- Transcript 'Haaura.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.L13.3.v4.A...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S277.g02235.01.t
Possible name(s)
CYP4F12; CYP4F3; EXOSC10
Gene model
Location
S277 [0 / 8,076]
Amino acid sequence
Length: 1,134
>Harore.CG.MTP2014.S277.g02235.01.p
MANSSNADCDMPQNKKAIPDVDEYSKKVAGALMNAIRCSSSFPSAGDDFDLYNSFPGFRK
FKSEQGTRILKHVNKILSHQGLKRFHLLDGHSSRALDIDDTTDHLVEVNDTMLERIGSLL
DEASGLTKKKDNEIEKVTRVSIPAVAGTSKPVVSSWNRKSKYGKQQTFRLFHAHNIARPQ
LKFKDKIDNGNLPFVPRIKSKPNSLKPLPQALVDLNCSEQGDVSLAIVNLVRQGRNYKAS
DQSIYDHPYEYELQNLVFTNAQLERVVPQMYPAFPEHPCELTSTKEELLDIIEKLKCAKE
IAVDLEHHSYRSFQGITCLMQISTRTDDFLIDALAARSHIHMFNEVFTDPSIVKVFHGAN
SDVQWLQRDFGVYVVNMFDTGAASRELSLQRHSLDFLLKKYCDVQADKKYQLADWRVRPL
PEEMRKYAQEDTHYLLYVYDMMKNSLLDVEESSAIASGNTRLMNVMYRSKEICLQRYEKP
LITPNSHLELYEKQHRKQLNENQLELLRLLYSWRDTMARREDESIGYILPKHMLFQIAEI
MPREPHGVLACCNPVPPLVRQNVHVIHELVIEARSKSHSKTKEHSHQKSSQTKVPVPAKP
DIEVYDDILACPHDLSHLNREKPADKTMCVRVVANSTSNLFKPCVQETSGSSSTAYKSRE
KDGPLEKNSWKPFIKFFPKDLDTEALQKMAYISRKFVETLRAYRVTVATMKGIQGLKKHF
LFGNLQSVEANEEGIAKMLKRTKAFPKMIPLWYGPIFCYLQFHFPNLVQVILATEEPKDN
FAYHFMKPWLGDGLLLSSGKKWKRNRRLLTAIFHSNALKEYATIFNDMAEVLLNKWKIAA
EIEDTTEISRDLSLMTLDIMLKCTMSTKSNCQTDEIKNSYVESVYLLSEMVIQRVMNPLY
YNDFIFNLSPLGIKFRKQCDIAHQYTENVIRKRKKLLQKDDLSLDVLIETRKTTGRNLDF
LDILLLTKDERGIGLADEEIRAEVDTFMFAGHDTTASGLSWAIYNLARHPDIQDKCRKEV
HGVLGSRKRVEWDDLPKLHYLTMCIKESLRIHPPVIEISRSLCNPLYFKRGFGNDQMNLD
TKLPRGKCDKILPPNTNILIGIMELHQNPYLWENPSEFDPDRFTLENVEKRSRY
Nucleotide sequence
Length: 3,404
>Harore.CG.MTP2014.S277.g02235.01.t
ATGGCTAATTCTAGTAATGCAGATTGTGATATGCCACAAAATAAAAAAGCTATACCAGAC
GTTGATGAATATTCTAAAAAAGTAGCTGGCGCTTTGATGAACGCTATTCGATGTAGCAGC
TCCTTTCCCAGTGCGGGAGATGACTTCGACCTGTACAATAGTTTTCCTGGATTTCGTAAA
TTCAAATCCGAACAAGGCACAAGAATTTTGAAGCATGTTAATAAAATACTGAGCCATCAA
GGGCTGAAACGATTCCATTTACTCGACGGCCATTCCTCTCGTGCTTTGGATATCGATGAC
ACAACTGATCATCTTGTGGAGGTCAATGACACGATGCTGGAACGGATCGGATCGTTACTC
GATGAAGCATCTGGACTGACCAAAAAGAAAGATAATGAAATAGAAAAAGTTACACGAGTT
AGTATCCCAGCTGTAGCAGGTACTTCTAAGCCTGTGGTTTCTTCATGGAATCGAAAAAGC
AAGTACGGTAAGCAACAGACTTTCAGATTATTCCATGCTCATAACATTGCTCGACCACAA
CTGAAATTCAAAGACAAAATCGACAATGGCAACTTACCGTTTGTCCCAAGAATTAAATCC
AAACCAAATTCTCTTAAACCATTACCCCAAGCTCTCGTTGATCTCAACTGCTCCGAACAG
GGCGACGTTTCTTTGGCTATTGTTAATCTCGTTCGTCAAGGCCGAAATTACAAGGCGTCA
GACCAAAGCATTTACGATCATCCCTACGAATACGAGTTACAAAACTTAGTGTTTACCAAC
GCGCAGTTGGAGCGCGTTGTACCTCAAATGTACCCAGCCTTTCCCGAACACCCGTGCGAA
CTCACTTCAACGAAAGAAGAGTTGTTGGACATAATTGAAAAACTAAAATGCGCCAAAGAA
ATAGCTGTGGACCTCGAGCATCATTCGTACAGATCTTTTCAAGGCATCACCTGTCTCATG
CAAATATCTACAAGGACTGACGATTTTCTGATTGACGCCCTTGCTGCGCGTTCCCATATC
CACATGTTCAATGAAGTTTTTACCGATCCGAGCATAGTAAAAGTCTTCCATGGTGCGAAT
TCTGATGTACAGTGGCTTCAGCGTGACTTTGGTGTTTACGTCGTTAATATGTTCGACACA
GGCGCTGCTTCCAGGGAGCTGAGTCTGCAAAGGCATTCGTTAGATTTCCTACTGAAAAAG
TATTGCGACGTACAGGCGGATAAAAAGTACCAGCTTGCCGACTGGAGAGTAAGGCCTCTT
CCTGAAGAAATGCGCAAGTACGCTCAAGAGGACACTCATTATTTACTATACGTGTACGAC
ATGATGAAAAACTCGCTGTTGGATGTCGAAGAGTCCTCTGCTATAGCGTCAGGTAACACA
AGACTGATGAATGTCATGTACAGAAGCAAGGAAATCTGTTTACAAAGATATGAAAAGCCC
CTGATAACTCCGAATTCCCACCTAGAATTATATGAAAAGCAACATAGGAAACAGTTGAAC
GAAAACCAATTAGAACTTCTGAGATTGCTGTACTCCTGGAGAGACACCATGGCAAGACGG
GAGGACGAGAGTATAGGTTACATACTGCCCAAGCATATGCTGTTTCAAATTGCTGAGATA
ATGCCAAGAGAACCACACGGTGTGCTTGCCTGCTGTAATCCAGTTCCTCCGTTAGTACGC
CAAAATGTTCATGTCATTCACGAACTCGTTATCGAGGCAAGATCGAAGTCTCACAGTAAA
ACCAAAGAACATTCTCATCAAAAATCTTCTCAAACCAAAGTTCCTGTTCCCGCTAAGCCT
GATATAGAAGTTTATGATGATATTTTAGCTTGTCCACATGACTTGTCCCATCTCAATCGA
GAAAAGCCAGCTGACAAAACGATGTGTGTGCGAGTTGTCGCGAATTCCACTTCAAATTTA
TTCAAACCGTGTGTTCAAGAAACTAGTGGTAGTAGTAGTACAGCGTATAAGAGTAGGGAA
AAAGATGGGCCGTTAGAAAAGAATTCCTGGAAACCATTTATTAAATTCTTCCCAAAAGAC
CTAGATACTGAAGCGCTGCAAAAAATGGCGTATATCTCTCGAAAATTTGTTGAAACCTTG
AGAGCATATCGTGTCACAGTTGCCACGATGAAAGGGATACAAGGCCTGAAAAAACATTTT
CTATTTGGTAATCTTCAATCAGTAGAGGCAAATGAGGAAGGCATAGCTAAAATGCTGAAA
AGAACCAAGGCATTTCCTAAAATGATTCCACTCTGGTACGGCCCCATATTTTGCTATCTG
CAATTTCATTTTCCCAATCTTGTTCAGGTAATACTGGCCACAGAAGAACCAAAAGATAAT
TTCGCATATCACTTTATGAAACCGTGGCTAGGAGACGGTCTGCTTCTAAGTTCAGGGAAG
AAATGGAAAAGGAATAGGCGTTTACTGACTGCTATATTTCACTCCAATGCCCTGAAAGAG
TACGCTACTATATTCAACGACATGGCAGAGGTTCTCTTAAATAAGTGGAAGATAGCCGCT
GAGATAGAGGATACCACTGAGATTTCTCGAGATCTAAGCCTGATGACTCTAGATATAATG
CTCAAATGTACTATGTCGACAAAATCCAATTGCCAAACTGACGAAATTAAAAACTCCTAC
GTGGAGTCGGTTTACTTGTTATCTGAGATGGTCATACAGCGCGTAATGAATCCCCTGTAT
TACAACGATTTCATCTTTAATTTATCTCCTCTGGGAATTAAATTTCGGAAACAATGCGAC
ATTGCTCATCAATACACAGAAAATGTTATACGGAAGAGAAAAAAACTGCTGCAAAAGGAT
GATCTGTCATTAGATGTCCTAATTGAAACAAGGAAAACAACTGGGAGGAATCTTGATTTC
CTCGATATTCTTCTTCTAACAAAAGACGAAAGAGGAATTGGACTTGCCGATGAAGAAATA
AGAGCGGAAGTTGACACGTTCATGTTTGCTGGACATGACACTACAGCTAGCGGTCTGTCA
TGGGCGATTTATAATCTAGCAAGACACCCAGATATTCAAGATAAATGCAGAAAAGAAGTA
CATGGCGTTTTGGGTAGTCGTAAGAGAGTAGAGTGGGATGATCTACCAAAACTGCATTAC
TTAACAATGTGCATTAAAGAGAGTCTCAGAATTCATCCACCCGTTATTGAAATCAGCAGA
TCGTTATGCAATCCCTTGTATTTTAAACGCGGTTTCGGTAATGATCAGATGAATTTGGAT
ACCAAGTTACCACGCGGAAAATGCGACAAGATCCTTCCTCCAAATACAAATATCCTAATT
GGCATCATGGAACTTCATCAAAATCCATATTTATGGGAGAACCCGTCAGAATTTGATCCG
GATAGATTTACTTTAGAAAACGTAGAAAAACGTTCTAGATATGC
| Pfam |
Exosome-assoc_fac_Rrp6_N (IPR012588) - T[33-125] 2.8E-17 |
| SUPERFAMILY |
RNaseH-like_sf (IPR012337) - T[176-480] 3.41E-77 |
| SMART |
3'-5'_exonuclease_dom (IPR002562) - T[279-447] 5.6E-47 |
| Pfam |
3'-5'_exonuclease_dom (IPR002562) - T[282-446] 6.1E-46 |
| SUPERFAMILY |
HRDC-like_sf (IPR010997) - T[492-580] 5.01E-24 |
| ProSiteProfiles |
HRDC_dom (IPR002121) - T[500-580] 15.941 |
| SMART |
HRDC_dom (IPR002121) - T[500-580] 7.5E-21 |
| Pfam |
HRDC_dom (IPR002121) - T[503-570] 4.8E-14 |
| Gene3D |
Cyt_P450_sf (IPR036396) - T[708-1134] 1.8E-88 |
| Pfam |
Cyt_P450 (IPR001128) - T[715-1132] 1.1E-81 |
| SUPERFAMILY |
Cyt_P450_sf (IPR036396) - T[717-1134] 5.24E-80 |
| PRINTS |
Cyt_P450_E_grp-I (IPR002401) - T[979-996] 4.8E-13 - T[999-1025] 4.8E-13 - T[1101-1125] 4.8E-13 |
| PRINTS |
Cyt_P450 (IPR001128) - T[990-1007] 1.2E-5 - T[1043-1054] 1.2E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CP4F2_HUMAN | 41.176 % | 335 | 4.02E-103 |
| EXOSX_HUMAN | 47.444 % | 577 | 0 |
| CP4FC_HUMAN | 42.056 % | 337 | 5.71E-104 |