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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  2. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S278.g01943.01.t

Possible name(s)

ACSF2; ACSM3; ACSM5

Gene model

Harore.CG.MTP2014.S278.g01943

Location

S278 [94,113 / 105,383]

Sequences

Amino acid sequence

Length: 953

>Harore.CG.MTP2014.S278.g01943.01.p
MSREFNDSKVKESPYPDIAIPEVSVASFVFERLKKYGDKIAIVDNTKGETVTFGQLYDQT
IKCTAALYKLGLEHGDVVGTCASANVEFPVVLLATLACGATLASYNPHVQEAYGLTECLD
VSAGDSLCPSNSVGLISSNTKVKMMKGYFNDPEGTAEIIDKEGWLHTDDIGHYDDKGILY
ISNRRNELIEYQGNLIAPTDIESVLWEHPKIVDAGVIGIPDKEAGQLPKAFVVKRENNLS
EMDVIRYAEEDVSKIVGVNFKEDIALLPYSSGTTGLPKGVMLTHQNLMANFKLSPFALRL
VPTRTLYLAMPMFHLGPIIYTLISLINGARTVLSEEIFSVERMFEAIEKHKISWSLMYPS
MLLDMSKSDLFTKYDISSLKFILTFGSCVSPSALEAVTQRCNAKVITGYGLTECAPIAYT
DFLCPSNSVGVILSNTKVKILDRESEEELGPGEDGEILVKGPQMTKGYFNNPEATAEMID
QEGWLHTGDIGHYDEEGILYVIGRQQEVIKYKEYQISPAQIESVLVKHSRIADAAVIGIP
NEETGKMLKAFVVKADPTLSKEEVTKYIEDTMSEYKHLRGGVEFIDFIPRSATRKILRNH
IDEILIDSKKDVAFLPYSSGTTGLPKGVMLTHHNVIAAAVLTPMTMRLSPTTIFYSVLPM
FHMMCASFSFGCLALGVTNVLEQRYTTELLLDTVQRRKITHLLAVPPMLLAMEQTDLFDK
YDTSSLKCVLYGGAPASSSTIKFVQNRYNVTMTAGYGLTECLPISLGEQNINSFHSAGSI
FYNTKIKVIDVVTGKTLGPGEKGEILAKGPQRMKGYFNNPEATAEVIDEEGWLHTGDIGY
YDEQGTLYLVDRLKELIKYKAFQIAPAELESVLHKHPEISDAAVIGIPDPVAGELPKAFV
VRKTKTLTEEKVKKFVEGSVARYKFLRGGVTFIDSIPKTPSGKILRRELRNRK

Nucleotide sequence

Length: 2,862

>Harore.CG.MTP2014.S278.g01943.01.t
ATGAGTCGAGAATTCAATGATTCAAAGGTTAAGGAAAGCCCTTATCCTGATATCGCCATA
CCCGAAGTTTCTGTAGCTTCTTTCGTTTTTGAAAGATTGAAGAAATATGGTGACAAAATT
GCTATAGTTGACAACACAAAAGGTGAAACAGTGACGTTTGGCCAACTGTACGATCAAACA
ATAAAATGTACGGCAGCCTTATACAAGCTTGGACTTGAACATGGTGACGTAGTTGGCACT
TGTGCATCGGCAAATGTTGAATTTCCAGTTGTATTGCTGGCAACTCTTGCATGTGGAGCG
ACTCTCGCTTCATACAACCCTCATGTCCAAGAAGCGTACGGTCTTACTGAATGCCTCGAT
GTTTCTGCTGGAGATTCACTCTGTCCTTCTAATTCGGTTGGCTTGATTTCTAGCAACACT
AAAGTGAAGATGATGAAAGGATATTTCAATGATCCAGAAGGTACTGCAGAAATAATAGAT
AAGGAAGGTTGGTTGCACACTGATGACATTGGACATTACGACGACAAAGGGATATTGTAT
ATCTCGAACCGACGAAATGAACTAATAGAATATCAAGGGAATCTGATAGCACCAACTGAT
ATAGAATCAGTTCTATGGGAACATCCGAAGATAGTCGATGCAGGTGTAATAGGGATTCCT
GATAAAGAGGCTGGGCAATTGCCAAAGGCGTTTGTGGTTAAAAGAGAAAACAATTTGAGT
GAGATGGACGTGATCAGATATGCCGAAGAGGATGTTTCCAAGATTGTTGGGGTCAACTTC
AAAGAGGATATTGCTTTGCTGCCTTATTCCAGTGGCACAACTGGTTTACCGAAGGGTGTT
ATGCTCACACATCAGAATTTGATGGCCAACTTCAAACTTTCTCCATTTGCGCTTCGTTTG
GTCCCGACACGCACACTATATCTAGCAATGCCAATGTTCCACCTCGGCCCAATAATATAT
ACCTTAATCAGTTTGATCAATGGCGCTAGAACTGTTTTGTCTGAAGAAATTTTCTCTGTT
GAAAGAATGTTTGAGGCTATTGAGAAGCATAAGATATCGTGGAGTCTTATGTATCCCTCA
ATGCTTTTGGATATGAGTAAAAGCGATTTGTTCACGAAGTATGATATTTCTTCTCTCAAA
TTCATCCTTACTTTTGGATCATGTGTCTCTCCATCTGCACTAGAAGCAGTAACACAACGG
TGCAACGCGAAAGTAATCACAGGTTACGGCCTAACTGAATGCGCTCCTATTGCGTATACC
GACTTTCTCTGTCCTTCCAATTCCGTTGGTGTAATTTTAAGCAATACTAAAGTGAAGATC
TTGGACCGCGAAAGTGAAGAGGAACTTGGACCAGGGGAAGATGGAGAAATTCTCGTCAAG
GGACCCCAGATGACGAAAGGTTATTTCAATAATCCTGAAGCCACTGCTGAAATGATAGAT
CAAGAAGGCTGGTTGCATACAGGAGATATTGGACATTATGACGAGGAAGGAATTCTATAC
GTTATTGGTCGACAGCAGGAAGTGATAAAATATAAAGAATATCAGATATCTCCTGCCCAA
ATCGAGTCTGTTCTCGTGAAGCATTCGAGGATTGCTGATGCCGCTGTGATAGGGATTCCC
AATGAAGAAACTGGAAAAATGCTGAAGGCATTTGTGGTTAAAGCAGATCCGACATTATCT
AAGGAGGAAGTGACAAAATACATTGAAGACACCATGAGTGAATACAAACATCTGCGAGGC
GGAGTGGAATTTATCGATTTCATTCCAAGAAGTGCGACCAGAAAAATACTCAGAAATCAT
ATCGATGAGATTCTCATTGATAGCAAGAAGGATGTAGCATTTTTGCCCTACTCAAGTGGA
ACGACTGGCTTGCCGAAGGGTGTCATGCTAACACATCACAACGTGATTGCCGCTGCTGTA
TTAACTCCGATGACAATGCGCTTGTCCCCAACCACCATCTTTTATTCTGTGCTACCAATG
TTTCATATGATGTGCGCTTCTTTCAGTTTCGGTTGCTTGGCGCTTGGAGTCACAAATGTA
CTGGAACAGCGATATACTACTGAACTGCTACTGGACACCGTGCAGCGACGTAAGATAACT
CACTTGCTTGCTGTACCACCTATGCTTTTAGCCATGGAACAAACAGATCTGTTCGATAAG
TACGATACAAGTTCCCTCAAATGTGTTTTATATGGAGGAGCTCCTGCATCAAGTTCCACA
ATAAAGTTTGTGCAGAATCGTTATAATGTAACTATGACAGCAGGTTATGGATTGACAGAA
TGCCTACCAATTTCTCTCGGGGAACAGAACATAAATTCATTTCATTCCGCTGGATCAATT
TTTTATAACACGAAAATAAAGGTCATTGATGTCGTAACGGGAAAGACACTTGGTCCCGGA
GAGAAAGGCGAAATTCTTGCCAAAGGACCACAGCGCATGAAAGGATATTTCAATAATCCT
GAAGCTACTGCAGAAGTAATAGATGAAGAAGGTTGGTTGCACACTGGGGACATTGGATAT
TACGATGAGCAAGGAACATTATATTTGGTAGATCGCCTGAAAGAACTGATAAAATATAAA
GCATTCCAAATTGCACCTGCCGAACTTGAATCAGTTCTCCATAAACACCCAGAAATTTCT
GATGCTGCTGTTATCGGTATTCCCGACCCAGTAGCTGGAGAGCTACCTAAAGCTTTCGTG
GTTAGGAAAACCAAAACTCTCACCGAAGAAAAAGTGAAAAAATTCGTCGAAGGTTCTGTA
GCCCGTTACAAATTTTTAAGAGGTGGAGTTACTTTTATCGATTCCATTCCAAAGACACCA
AGTGGAAAAATCCTGAGGCGAGAATTGAGGAACCGAAAATGA

InterProScan

Pfam
AMP-dep_Synth/Lig (IPR000873) - T[31-111] 2.8E-12 - T[128-191] 2.2E-10 - T[259-511] 9.9E-69 - T[580-859] 6.7E-75
Pfam
AMP-bd_C (IPR025110) - T[201-255] 1.1E-8 - T[521-595] 1.4E-13 - T[868-943] 2.9E-18
ProSitePatterns
AMP-binding_CS (IPR020845) - T[267-278] . - T[615-626] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACSF2_HUMAN 28.032 % 155 1.48E-39
ACSM3_HUMAN 29.462 % 130 1.68E-31
ACSM5_HUMAN 28.871 % 127 2.39E-30