Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Region 'REG00001522' > 
  2. Transcript 'Phfumi.CG.MTP2014.S1...' > 
  3. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S27.g01215.03.t

Possible name(s)

DKC1; TRUB1

Gene model

Harore.CG.MTP2014.S27.g01215

Location

S27 [259,495 / 261,520]

Sequences

Amino acid sequence

Length: 220

>Harore.CG.MTP2014.S27.g01215.03.p
MVVNGGMDQEHTKKKKRKSDKVTAIGEVQEQGDFFIKSEDKQPPKLNTSQWPLLLKNYDR
LNVRTNHYTPLACGCSPLKRDIQEYVRTGFINLDKPANPSSHEVVAWIKRILKVEKTGHS
GTLDPKVTGCLIVCVERATRLVKSQQSAGKEYVCIVRLHDAIENQLKLARSSSHYSYPCP
LEVFSTGLGLLYLRAVEVDDRFSSDALSLVRYRIVEKRDL

Nucleotide sequence

Length: 663

>Harore.CG.MTP2014.S27.g01215.03.t
ATGGTGGTCAACGGAGGTATGGATCAAGAACATACGAAGAAGAAGAAGCGTAAGTCCGAT
AAAGTCACTGCAATCGGAGAAGTTCAAGAACAAGGTGATTTCTTCATTAAGTCGGAAGAT
AAACAGCCACCTAAGCTTAATACATCGCAATGGCCATTGCTTCTAAAAAACTATGACAGA
CTTAATGTGCGTACAAATCATTACACGCCATTGGCCTGTGGATGTTCTCCTTTGAAGAGA
GACATCCAGGAGTATGTTAGGACGGGATTCATTAACCTTGACAAGCCAGCTAACCCATCA
TCTCATGAAGTTGTTGCGTGGATAAAAAGAATATTGAAGGTTGAAAAAACCGGGCACAGT
GGAACTCTGGATCCGAAAGTAACCGGTTGCCTGATTGTGTGTGTCGAACGTGCGACACGT
CTGGTAAAATCCCAGCAGTCAGCAGGTAAGGAATATGTGTGCATTGTACGGCTTCATGAT
GCTATTGAAAATCAACTGAAGCTTGCAAGGAGTTCTTCTCATTATTCTTATCCTTGTCCA
TTAGAGGTTTTCTCAACTGGACTTGGATTATTATATTTGAGAGCAGTAGAAGTTGACGAC
CGTTTTTCATCTGATGCATTGTCGCTTGTGCGATACAGAATCGTTGAAAAACGGGATTTA
TGA

InterProScan

PANTHER
tRNA_PsdUridine_synth_B_fam (IPR004802) - T[10-171] 2.4E-82
SMART
Dyskerin-like (IPR012960) - T[47-105] 2.0E-35
Pfam
Dyskerin-like (IPR012960) - T[48-105] 1.3E-32
SUPERFAMILY
PsdUridine_synth_cat_dom_sf (IPR020103) - T[48-165] 7.61E-40
Pfam
PsdUridine_synth_N (IPR002501) - T[109-163] 1.2E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DKC1_HUMAN 76.19 % 242 8.4E-78