Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S27.g04839.01.t

Possible name(s)

CBR1; CBR3; HSD17B14

Gene model

Harore.CG.MTP2014.S27.g04839

Location

S27 [126,701 / 127,690]

Sequences

Amino acid sequence

Length: 274

>Harore.CG.MTP2014.S27.g04839.01.p
MSTPVAVVTGSNKGIGLAIVRALCKQFQGDGLKPKFHLLDVSDQESINVLKDFLVKQYGG
VNVFIHNAGFAYKNADPTSFAIQARVTIDANFYPTINLANTILPIMKDYGRYVNVSSMVT
LFSLEKCSKEVQDFFKSDDMTEEKLIAKLEEFISATKSDTHQQTGFSNSAYGMSKLGVTA
FTRVLGKRVKAMDKQNVLVNCCCPGWVRTDMAGDKAPLTPDQGAENPIMIALIPKGQTEP
NGEFIQEKQVKKWYNIYCYDELAFFYRNKTTAPA

Nucleotide sequence

Length: 825

>Harore.CG.MTP2014.S27.g04839.01.t
ATGTCTACTCCTGTTGCAGTCGTCACCGGTTCCAATAAAGGAATTGGCCTGGCCATAGTA
CGAGCTCTCTGCAAACAATTTCAGGGAGACGGATTGAAACCGAAATTTCATCTGCTTGAT
GTAAGCGATCAAGAGAGCATCAATGTTTTGAAAGATTTTTTGGTCAAACAGTATGGTGGC
GTGAATGTGTTCATCCACAATGCTGGATTTGCTTATAAGAACGCCGATCCAACTTCGTTT
GCCATCCAGGCACGAGTTACTATTGATGCTAATTTCTACCCAACCATCAACCTCGCCAAT
ACTATTTTACCTATCATGAAGGATTACGGACGATACGTCAATGTTTCCAGCATGGTTACT
CTGTTTTCATTGGAAAAATGCAGCAAAGAAGTCCAGGACTTCTTTAAGTCTGACGATATG
ACAGAAGAGAAGCTGATAGCTAAACTTGAAGAATTCATTAGCGCCACCAAATCCGACACT
CACCAACAGACCGGCTTTTCAAACAGTGCTTATGGAATGTCGAAGCTCGGAGTCACGGCC
TTTACCAGGGTGCTAGGCAAACGGGTGAAAGCCATGGACAAACAGAATGTTCTGGTCAAC
TGCTGTTGTCCTGGTTGGGTACGTACCGATATGGCTGGAGACAAAGCACCCTTAACACCC
GACCAGGGAGCTGAAAACCCAATCATGATAGCACTTATTCCCAAAGGCCAGACCGAACCA
AACGGTGAATTTATACAGGAAAAGCAAGTGAAAAAGTGGTACAACATTTATTGCTATGAT
GAACTTGCATTTTTTTACCGAAACAAAACTACAGCACCTGCATGA

InterProScan

SUPERFAMILY	NAD(P)-bd_dom_sf (IPR036291) - T[5-245] 2.46E-45
PRINTS	SDR_fam (IPR002347) - T[5-22] 8.2E-23 - T[59-70] 8.2E-23 - T[59-70] 3.1E-7 - T[104-120] 8.2E-23 - T[110-118] 3.1E-7 - T[171-190] 8.2E-23 - T[171-190] 3.1E-7 - T[195-212] 8.2E-23
Pfam	SDR_fam (IPR002347) - T[156-214] 2.1E-8
ProSitePatterns	Sc_DH/Rdtase_CS (IPR020904) - T[158-186] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CBR1_HUMAN	46.125 %	270	5.95E-91
CBR3_HUMAN	44.649 %	260	4.62E-87