- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S3...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S281.g12608.01.t
Possible name(s)
ABCC12; ABCC4; ABCC5
Gene model
Location
S281 [26,469 / 113,897]
Amino acid sequence
Length: 944
>Harore.CG.MTP2014.S281.g12608.01.p
SSILSAILSQLPTCDGSIHVNGDITFANQVPWVFSGTLFGMKEDVDDNKTLTLEKINIRV
DSGKLLAIIGPVGSGKSSILSAILGQLPTCGGSINVNGQITFANQVPWVFSGSVKENILF
GESYDPDWYQKVIYACALVEDVNSLPSGDQTLVGERGVTLSGGQKARVNLARAVYRKDAS
ICLLDDPLSAVDAAVGNHIFQHCISGLLKDKVCILVTHQLHFLMKSDEIIIMKEGKIANR
GTYQELQADGTDFASLLQIEEREDFTEEENLFLSNSVEIFEKNEKINHEILSDDDDEVPL
LDDRARNQTVPEELRKEGKVAANVYHQYLRDGSSPFVLILSLLLFLLSTIIAIITDWWIA
FWSSSSINYEKSLKAGFYNESVNQTSTQSTQFIQQYDPMFYLMIFGVAVFGCLIFAYLRT
ILVFRLSFMSNEHMHDKMFKSLLRAPIRHFDINPVGRILNRFSKDMGQIDEQLPLALGEI
VFIVLTVLAAMIFICVFNYMILLLVIPLLVYFLWIRRYYLQSGNDMKRLEGITRSPVFSL
LSSTLDGMITIRALRAENEFKEKFYSAQDLHSASWFLYSTGYKWLGFRLDFVSALFTTCV
SYLCIATINLIPVSPGIMGLILTYSISLIGIVQYMAKTSAVVDNLMTSVERIQQYYKIPP
EADNENANFKPEEHWPEYGAVTFENVSLAYYKNGPSILKNIQFEVKAYEKVGIVGRTGAG
KSSLISALFRLTELTGGEIFIDGIPITPLGLNDLRKVISIIPQDPVLFTGTMRYNLDPFS
HYDDEELWNALEQVQLKEVVESLPLKLSSELAESGSNFSVGQRQLVCLARAVLRKSKILV
IDEATANVDLRTDRLIQLTIREKFKHCTVLTIAHRLNTIIDSDRVMVMDAGQLKEFDEPY
ILLQDSSSLLSKFAAKTKGGQLEVLKSLAEEAHVRRINSNHDEK
Nucleotide sequence
Length: 4,578
>Harore.CG.MTP2014.S281.g12608.01.t
AGTCATCCATACTGAGTGCTATTCTCAGTCAACTACCAACTTGTGATGGATCAATACATG
TCAATGGAGATATCACGTTTGCAAACCAAGTACCTTGGGTTTTCTCTGGAACTTTGTTCG
GTATGAAGGAAGATGTCGATGATAACAAGACTTTAACATTGGAGAAAATAAATATTCGTG
TTGACAGTGGAAAACTGCTTGCAATCATCGGACCTGTTGGTTCAGGGAAGTCATCCATAC
TAAGTGCTATTCTTGGTCAACTACCAACTTGTGGTGGATCAATCAATGTCAATGGTCAAA
TCACATTTGCAAACCAAGTACCTTGGGTTTTCTCAGGAAGCGTTAAAGAAAATATTTTAT
TTGGAGAAAGTTATGATCCAGATTGGTATCAAAAAGTGATTTATGCATGTGCACTGGTCG
AGGACGTTAATAGTTTACCTTCGGGAGATCAAACCTTAGTCGGTGAACGTGGTGTTACAT
TGAGTGGAGGTCAAAAAGCTCGAGTTAATCTTGCAAGAGCTGTTTATCGTAAGGATGCAA
GTATTTGTTTGTTGGATGATCCTCTGAGTGCAGTAGATGCTGCTGTTGGAAATCACATAT
TTCAACATTGTATATCTGGATTGCTCAAGGATAAGGTTTGCATTCTTGTCACACATCAAC
TTCATTTCTTGATGAAATCCGACGAAATTATAATAATGAAAGAGGGCAAGATAGCGAATC
GTGGGACATATCAGGAATTACAGGCAGACGGAACTGACTTTGCTTCATTGTTGCAAATCG
AAGAAAGAGAAGATTTTACTGAAGAAGAAAATCTGTTTCTGAGCAATTCGGTCGAAATTT
TTGAAAAAAATGAGAAAATTAACCACGAAATTCTCTCTGATGACGATGACGAAGTACCGT
TACTTGATGACAGAGCAAGGAATCAAACTGTTCCTGAGGAACTTAGGAAGGAGGGGAAAG
TAGCGGCAAACGTTTATCACCAATATTTACGCGACGGGTCTTCACCGTTTGTCCTTATAT
TATCCCTTCTATTGTTTCTTCTGAGTACAATAATTGCAATCATTACGGACTGGTGGATTG
CATTTTGGTCTTCCAGTAGTATAAACTATGAAAAATCATTAAAAGCGGGATTCTATAATG
AATCAGTAAACCAAACTTCGACTCAGTCAACTCAGTTTATTCAACAATATGATCCAATGT
TCTATCTAATGATTTTTGGAGTTGCTGTTTTTGGCTGTTTGATATTTGCGTACCTTCGCA
CAATCCTAGTGTTTCGTCTCTCCTTCATGTCAAATGAGCATATGCACGATAAGATGTTTA
AATCCTTGTTGCGTGCTCCGATCCGTCATTTTGACATTAATCCTGTTGGTCGGATTTTGA
ATAGATTTTCAAAAGACATGGGACAAATTGATGAACAACTCCCACTAGCTTTGGGTGAAA
TAGTTTTTATCGTCCTTACTGTGCTAGCAGCTATGATTTTTATCTGTGTTTTCAACTATA
TGATCCTGTTACTTGTCATTCCCCTGTTGGTGTATTTTCTTTGGATCCGGAGATATTATT
TGCAAAGTGGAAATGATATGAAGAGACTGGAGGGGATCACTCGTAGTCCAGTTTTCAGTT
TGCTTTCATCAACGTTGGACGGGATGATTACTATTCGTGCTCTAAGGGCTGAAAATGAAT
TCAAGGAGAAATTTTATAGTGCTCAAGATTTGCACAGCGCCTCATGGTTCCTGTACTCTA
CCGGATATAAATGGCTTGGATTCCGATTGGATTTTGTCAGCGCATTATTCACTACGTGTG
TATCGTATCTATGCATTGCTACAATAAATCTGATACCCGTGAGTCCAGGTATCATGGGAC
TTATATTGACGTATTCGATCAGTCTGATCGGCATTGTTCAGTATATGGCGAAAACAAGTG
CGGTTGTTGACAATTTGATGACTTCCGTGGAAAGAATTCAACAATATTACAAAATTCCAC
CTGAAGCAGATAATGAGAATGCAAACTTTAAACCTGAAGAGCATTGGCCTGAATATGGTG
CTGTGACATTTGAAAATGTTTCCCTTGCTTACTATAAAAATGGGCCAAGCATATTAAAGA
ACATACAATTTGAAGTCAAAGCTTATGAGAAGGTTGGAATAGTTGGTCGAACTGGTGCCG
GAAAAAGTTCTCTCATCTCGGCTTTATTCAGATTAACAGAACTCACAGGAGGAGAAATAT
TCATTGATGGAATTCCAATAACTCCTCTTGGTCTTAATGATCTTCGAAAAGTCATCTCTA
TAATTCCTCAGGATCCTGTCCTCTTCACTGGAACTATGAGGTACAATCTGGATCCATTCT
CACATTACGATGATGAGGAATTATGGAATGCATTGGAGCAAGTTCAACTGAAGGAAGTTG
TTGAATCTCTTCCTTTAAAATTAAGTAGTGAGCTTGCTGAATCAGGATCCAACTTTAGTG
TTGGTCAACGACAGCTTGTGTGTCTTGCAAGAGCTGTTCTGAGGAAAAGTAAAATATTGG
TGATTGATGAAGCAACAGCTAATGTTGATCTTAGAACCGATCGATTGATTCAACTTACAA
TTCGTGAAAAGTTCAAACATTGCACTGTTCTTACTATAGCTCACAGACTTAATACAATCA
TTGATTCGGACAGAGTTATGGTGATGGATGCCGGACAATTAAAAGAATTCGATGAACCAT
ACATCTTACTACAAGATTCGAGTAGTTTGCTGTCTAAATTTGCAGCGAAAACTAAAGGTG
GTCAACTGGAAGTCTTAAAGAGCCTAGCTGAAGAAGCACACGTAAGAAGAATTAACTCTA
ATCATGACGAAAAGTGAGTTTGCATCCTGGTGACCCATCAACTCAGGTTTTTGGAAAAAG
TTGATCAAATCCTGTTTCTGAAAGAGGGCACGATATCAGCTGTTGGTACATACAATATAT
TACAAGCAACCAGTAAGGAATTTCGCGATTTGCTTAAAGAACATGAAAGGAATGAAAATT
CGACTTTATGCAATGGTGATGATGAGAATTGTGATTCAGATCCGACTTTTCATCGCACTT
CTCAGGATTCTGCAGCTGAAAATCTCAATTTAAATCAGAACAACAGACTCAGTTCGGAAG
AAGGAGAAAACACACCATTACTGAAGGAGGAAAAAGTACAGTACATAGATGAAGAGGAGA
GGATGTCTGGTAGTGTCAGCTGGAAAGTTTATCTCGAATACTTCCAAGTGGGAAATAACG
TTCCACTTTTGATCATGATGACACTCACAGTGGCCTCTGTTTATCCTTTGTTAATATTCA
TTGATTGGTGGATTGCACAATGGGCTGCAAGAAATGACCAGAAAACCTTTTACGCAAAAC
ATGCAAATAACATCACAAATTTTGCAACGAATGATTCATTTTTCGATGAGAACTCTGGTA
GCGCTAATATATCGGTGACAGACGAGTTCGTCCGGATTTGGGGATATAAAATCAAGTTCA
ACCTATTCACAGGGTTATATGGAACCTTTATTTCTGTCGGTGTCATCGTTTGCTTAAGTG
GGCTATTGCTGAATCAATATATTTGTTACAAGTCAAGTTTGAACATGCATGACAAGATGT
TTGATGCTGTATTGAGAGCTCCAGTTCGATTTTTTGACACAAATCCTGTTGGTAGAATAT
TGAATCGATTCTCATCAGACTTGTTTCGTATCGACGAACAAATTCCAGAATACTTGATTC
ACACCATCTTTTCTCTATGCTATATGCTCACCGTTCTGATTTATTCTGCTACTGCGAGCT
ATGTGGTTATATTATTTTTTATTCCGGTCATCCTTGTGGTGTATTGGCTTATCAACTACT
ACCTAAAAACCTCCCGGGATGTCAAACGTCTTGAAGCAACAACTCGCAGTCCTGTCTTCA
GTTTGTTGTCTTCGACAATTCAAGGATTAACAACAATACGAGCGTACAAGGTTGAAAAAC
GTTTTGAGGAAAAATATTACAAGTTGAGTGATATACATGGAAATGCTGCGTTCAGCTACC
TTTCTGCTGAACATTGGATGGGAGTACGTTTGGATATGCTGACAGCTTTGTTACTATCTT
TCATTGCATTTTTGTTCATATCAACAAAGTCGATACAAAGTGTGCAAGTTGGATTATCAC
TGACCTATATCACCGGCTTGGCCGGTATACTGGATTGGATAATGAAGAACTTGTCCAGTT
TGGAAAATGGAATGACCTCAGCTGAAAGAATTCAACAGTATTATCATATAGAACCAGAGG
CTGATCATGAAATTGCACACATGAGACCACCGTCAGAATGGCCATTGCATGGAGTTATAA
ATTTTAAAAATGTTTCCTTTGGTTATTACGAGGGAGGACCTACAATACTGAAAAATCTAA
GTTTCAAAATCGAACCACAAGAAAAAATTGGAATAGTTGGACGAACTGGAGCTGGAAAGA
GTTCTCTCATCGCGGCTTTATTCAGATTAGCTGAACTAACAGGAGGAGAAATATTAATCG
ATGGGATCCCAATAACTCCTCTTGGTCTTCATGATCTTCGAAAAGTTATCTCTATAATTC
CTCAGGGATCCTGTCCTC
| PANTHER |
ABCC4 (IPR030240) - T[1-38] 0.0 - T[49-922] 0.0 |
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[33-259] 20.989 - T[681-915] 17.127 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[46-258] 4.4E-53 - T[673-906] 1.17E-69 |
| Pfam |
ABC_transporter-like (IPR003439) - T[53-188] 2.9E-16 - T[698-846] 8.0E-32 |
| SMART |
AAA+_ATPase (IPR003593) - T[62-236] 2.6E-10 - T[707-892] 1.5E-11 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[160-174] . - T[818-832] . |
| Gene3D |
ABC1_TM_sf (IPR036640) - T[305-663] 5.0E-37 |
| SUPERFAMILY |
ABC1_TM_sf (IPR036640) - T[327-652] 2.49E-47 |
| Pfam |
ABC1_TM_dom (IPR011527) - T[338-631] 1.4E-32 |
| ProSiteProfiles |
ABC1_TM_dom (IPR011527) - T[339-644] 33.769 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MRP5_HUMAN | 41.002 % | 668 | 0 |
| MRP9_HUMAN | 37.082 % | 602 | 0 |
| MRP4_HUMAN | 48.464 % | 816 | 0 |