- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S281.g14914.01.t
Possible name(s)
ABCC12; ABCC2; ABCC4
Gene model
Location
S281 [3,099 / 52,493]
Amino acid sequence
Length: 630
>Harore.CG.MTP2014.S281.g14914.01.p
MRPNKEIKANIISKLSFWWMNSFMLDGSKKKIDENDLIEIKESDRSVNVCGEIERNWRNE
INQSSAEKRKPSLLRALWKTYWFRIFLLGLTLIAVTLRLSQKSLSQTPSGKIVNLSSSDV
MNFEFFFLLVNHLWVTPIQCCVVIAILWKDLGFTVVFGILVVSIIMLVMMEIGKYQGVLR
LRTAKFTDRRDHYMSEIIAGMRIIKMYTWEKPFTQVIHDIRRKEVFPILLGSILRVITYA
LYFSFAKNLAFVIFSTFAYYGGQLTQPIFFKSVGLFGVLRRSIGQFFGHAVEMLSKCFVS
VERIEELLLLEEFSHDRERKEENIHPGDSFVDMKNFFGKWHTNDSSDTDENITNLDESED
SSTNPTLKDITLRVRAGELLTVIGTVGSGKSSLMSAILKKLPACEGQMTISGKVTYADQT
AWVFSDSVRENILFGNEYDPTWYQEVVDACALTKDINSFPHGDQTLVGERGVTLSGGQKA
RVNLARAVYRKNASICLLDDPLSAVDAAVGNHIFQHCICQLLKDKVCILVTHQLRFLEKV
DQIVILKEGTISAVGTYSVLQSTSKEFSDLLKEHEKNEKLSPCNGDDENSDSDLIFHHIS
QDSAVESHNFNQNNRFSSEEGENTPLLKEV
Nucleotide sequence
Length: 1,950
>Harore.CG.MTP2014.S281.g14914.01.t
ATGCGACCCAATAAGGAAATAAAGGCGAACATCATTTCTAAATTATCATTCTGGTGGATG
AATTCGTTTATGCTAGACGGTTCCAAAAAGAAGATTGACGAAAATGATTTAATAGAAATT
AAGGAAAGCGATCGATCCGTCAATGTCTGTGGCGAAATTGAAAGGAACTGGAGGAACGAA
ATTAATCAAAGTTCTGCCGAAAAGAGAAAACCTAGTTTACTTCGAGCACTGTGGAAAACT
TACTGGTTTCGCATCTTTCTATTAGGGTTGACTCTCATAGCAGTGACCTTGCGACTGAGT
CAAAAATCTCTTTCTCAAACTCCGAGTGGAAAAATAGTCAATCTGAGTTCATCTGATGTC
ATGAATTTTGAATTTTTTTTCCTTCTGGTGAATCATCTCTGGGTCACACCTATTCAATGC
TGTGTTGTCATTGCTATTTTGTGGAAAGATCTTGGTTTTACTGTTGTTTTTGGTATATTG
GTTGTCTCCATCATTATGCTTGTCATGATGGAGATTGGAAAATATCAGGGTGTATTAAGG
CTGAGGACAGCAAAATTTACAGATAGAAGAGATCACTACATGAGTGAAATCATCGCTGGA
ATGAGAATTATAAAAATGTATACGTGGGAAAAACCATTCACTCAAGTGATTCACGATATT
CGCAGGAAGGAAGTTTTTCCAATTCTCTTGGGATCTATTCTTCGAGTGATAACTTATGCG
CTATACTTTAGCTTCGCTAAAAATCTCGCCTTCGTTATTTTCTCCACGTTTGCATACTAT
GGTGGTCAGCTTACTCAGCCAATTTTCTTCAAGTCAGTGGGACTTTTTGGCGTACTGCGG
AGGAGCATTGGACAATTCTTTGGTCATGCGGTTGAAATGCTATCAAAATGCTTTGTATCC
GTTGAAAGAATTGAAGAGCTTTTGCTGTTGGAAGAATTTTCTCACGATCGGGAGAGAAAG
GAGGAAAACATTCATCCTGGTGATTCCTTTGTAGATATGAAAAATTTCTTTGGCAAATGG
CATACGAATGATTCCTCTGATACTGATGAGAATATCACAAACTTGGATGAGTCTGAAGAC
AGTTCTACCAACCCGACACTGAAAGACATTACACTTCGAGTAAGGGCTGGAGAGTTGCTA
ACAGTAATTGGAACTGTTGGTTCTGGAAAGTCTTCCCTAATGAGTGCAATATTGAAAAAG
CTTCCAGCTTGCGAAGGACAAATGACTATTTCTGGTAAAGTGACGTATGCTGATCAAACT
GCTTGGGTTTTCTCGGATTCTGTTCGTGAAAATATTTTGTTCGGGAACGAGTACGATCCT
ACGTGGTATCAAGAAGTCGTTGATGCATGTGCTTTGACCAAGGACATCAATTCCTTTCCA
CATGGAGATCAAACCTTAGTCGGTGAACGTGGCGTTACGCTGAGTGGAGGTCAAAAAGCT
CGAGTTAATCTTGCAAGAGCTGTTTATCGTAAGAATGCAAGTATTTGTTTGTTGGATGAT
CCTCTGAGTGCAGTAGATGCTGCTGTTGGAAATCATATATTTCAACATTGCATATGTCAA
TTGCTGAAGGATAAGGTTTGCATCCTGGTGACCCATCAACTAAGATTTTTAGAAAAGGTC
GATCAAATCGTGATCCTGAAAGAGGGCACGATATCAGCTGTTGGTACATACAGTGTTTTA
CAATCAACCAGTAAGGAATTTAGCGATTTGCTCAAAGAACATGAAAAGAATGAAAAGTTG
TCTCCATGCAATGGTGATGATGAGAATAGTGATTCAGATCTGATTTTTCATCACATTTCT
CAGGATTCTGCAGTTGAAAGTCATAATTTCAATCAGAACAACAGATTCAGTTCGGAAGAA
GGAGAAAACACACCATTACTGAAGGAGGTGTGAGACATCAACCTATTTCCACACGGCGAT
CAAACTTTAGTCGGTGAACGTGGCGTTACA
| PANTHER |
ABCC4 (IPR030240) - T[2-92] 2.0E-166 - T[96-612] 2.0E-166 |
| Gene3D |
ABC1_TM_sf (IPR036640) - T[78-310] 1.5E-12 |
| SUPERFAMILY |
ABC1_TM_sf (IPR036640) - T[89-308] 4.32E-19 |
| ProSiteProfiles |
ABC1_TM_dom (IPR011527) - T[97-295] 18.238 |
| Pfam |
ABC1_TM_dom (IPR011527) - T[97-278] 2.7E-15 |
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[350-573] 20.322 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[352-572] 6.46E-52 |
| Pfam |
ABC_transporter-like (IPR003439) - T[367-502] 7.0E-17 |
| SMART |
AAA+_ATPase (IPR003593) - T[376-550] 4.4E-6 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[474-488] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MRP2_HUMAN | 34.055 % | 268 | 2.2E-77 |
| MRP9_HUMAN | 31.624 % | 269 | 6.99E-78 |
| MRP4_HUMAN | 40.49 % | 400 | 4.55E-125 |