- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S284.g00519.01.t
Possible name(s)
FAT1; NOTCH2; STAB1
Gene model
Location
S284 [90,713 / 95,467]
Amino acid sequence
Length: 748
>Harore.CG.MTP2014.S284.g00519.01.p
MTNFFLAVAILLAADLACSTSPPFIKPIPTYRQGCCLGGNPCDKPNCPAYPYAKCRPKTC
GKYVKCEPQYYTPLKDLSIRDCNQPTPSPPCPSYLTIHSCKVNPCNVASCPAEPLAKCRA
NYCGGCNAEFYLAGRILSDYDCTPKSDSCAPYTDCFFPNPCICPRHKGAKCILQHCAPNT
CKHLYFDAKGKSLSNEDCGLCKDGSKYNLCSGSYCNRKICPAYPTAKCVVNHCGNACSHK
FVDKNGKDVDCSIPCPPGTPVARCFARPCDVTKCAKYPDAICVDSYCGGCRAIFYYQGKK
LDRLACSDPMCEVPQSFQNGYFKPNSRYIAIGKTVEYTCNTGYKRIGSSRRRCVVRSGKP
KLTGSHPNCQVICPGNASPPQCYVDPCTSCPAYPEAECFADYCTCTATYIVEGDIAIPPS
ACDAGCKAKPCHKHGVCITQAGGYKCVCAPGYVGDGYRCTLGCPPGKINCADPCKGKTCP
AYPKAKCNPIPCGCTFMFVQEGDIAIPYGRCRVSIDGCRNRPCHADATCSRLDKNGGYKC
TCNKGYIGDGKSCKGECPGQIRCDDPCKGKTCPAYPLAVCNPIHCGCRVMWIHEFDIAIP
TDSCYDIDGCRSNPCHTHATCTTLDKKGGYKCACKSGYTGDGFGCLQRCKNGLAPVRCLI
SPCKSAKCPAYPYAKCVADTCSCTSTFRLGDIILSSRNCKKTPDRGCPTTYSPLLKCGNF
CKGDYDCPGGRICCPNRCGNSCEYVRKG
Nucleotide sequence
Length: 2,247
>Harore.CG.MTP2014.S284.g00519.01.t
ATGACTAACTTTTTCCTAGCAGTGGCCATTCTGCTGGCTGCTGATTTAGCATGCTCAACC
AGCCCACCGTTCATTAAACCGATACCGACATACCGACAAGGTTGTTGTTTAGGTGGAAAT
CCGTGTGACAAACCCAATTGCCCGGCTTACCCCTATGCAAAATGCCGACCAAAAACATGT
GGGAAATACGTGAAATGTGAACCGCAGTATTACACTCCTTTGAAAGATTTGTCGATAAGG
GATTGTAATCAGCCAACTCCATCACCTCCATGTCCATCGTATCTGACAATTCATAGCTGC
AAAGTGAATCCGTGCAATGTGGCAAGTTGCCCGGCCGAACCTCTTGCCAAGTGCAGAGCA
AATTATTGCGGAGGCTGCAACGCTGAGTTTTATCTTGCGGGACGCATATTGTCCGACTAC
GATTGCACGCCAAAATCTGATAGTTGCGCACCCTATACTGACTGCTTTTTCCCCAATCCA
TGCATCTGTCCTCGACACAAAGGCGCCAAGTGTATTCTTCAGCACTGTGCTCCAAATACT
TGCAAACATCTGTATTTTGATGCCAAAGGAAAAAGCCTTTCCAATGAAGACTGCGGACTT
TGTAAAGATGGTTCAAAATACAACCTGTGTTCCGGATCATATTGTAACAGAAAAATTTGC
CCGGCATATCCAACGGCAAAATGCGTGGTCAACCATTGTGGAAACGCTTGCTCTCACAAG
TTTGTTGATAAGAACGGAAAAGACGTCGATTGCTCAATACCGTGCCCACCGGGCACTCCA
GTTGCAAGATGTTTTGCTCGACCATGTGATGTAACTAAGTGCGCAAAGTATCCAGACGCT
ATATGCGTAGATAGTTACTGTGGTGGCTGTAGGGCTATTTTTTATTACCAAGGAAAGAAA
TTAGACCGTCTCGCTTGCTCTGATCCTATGTGCGAAGTTCCTCAAAGCTTTCAGAACGGT
TATTTCAAGCCGAATTCGAGATACATCGCAATCGGAAAGACTGTTGAATATACTTGCAAC
ACAGGATATAAGAGAATTGGTTCTTCCCGTCGTCGATGTGTGGTTCGTTCAGGAAAACCT
AAACTTACGGGAAGTCATCCTAATTGCCAAGTAATATGTCCTGGCAATGCATCACCGCCT
CAGTGTTACGTTGACCCGTGTACCAGTTGTCCGGCCTACCCTGAGGCCGAATGCTTTGCC
GATTATTGTACATGTACTGCAACGTACATTGTCGAAGGAGATATAGCGATCCCACCAAGT
GCTTGCGATGCTGGATGTAAGGCTAAACCATGTCATAAGCACGGAGTATGCATTACCCAA
GCCGGAGGATACAAATGCGTCTGCGCGCCTGGCTATGTTGGAGATGGGTATAGATGTACA
TTGGGGTGTCCTCCCGGAAAAATCAATTGCGCCGATCCGTGCAAAGGAAAAACTTGCCCT
GCATATCCAAAAGCCAAATGTAATCCTATTCCTTGTGGATGTACGTTCATGTTTGTTCAA
GAAGGCGACATAGCTATTCCCTATGGCAGGTGTCGTGTTTCTATTGATGGATGCCGTAAC
AGACCATGTCACGCTGATGCAACTTGCAGTAGATTGGATAAAAATGGTGGTTACAAATGT
ACTTGCAATAAAGGATACATAGGAGACGGGAAATCATGTAAAGGAGAGTGTCCAGGACAA
ATAAGATGCGATGATCCATGCAAAGGCAAAACGTGTCCCGCTTACCCACTTGCTGTATGC
AATCCAATCCATTGTGGATGCAGAGTAATGTGGATACACGAGTTCGACATTGCAATTCCT
ACAGATAGTTGTTATGATATTGATGGTTGCCGGAGCAATCCATGTCACACACATGCGACT
TGTACTACATTGGACAAGAAGGGAGGATACAAATGTGCTTGCAAATCAGGATACACAGGA
GATGGATTCGGCTGTCTACAAAGGTGCAAAAATGGCCTCGCACCGGTTAGATGTTTAATA
AGCCCATGTAAGTCTGCCAAATGCCCGGCTTATCCGTATGCAAAGTGTGTTGCTGACACG
TGTAGTTGCACCAGCACGTTTCGTTTGGGCGATATTATACTGTCCTCCAGGAACTGCAAA
AAAACGCCAGATCGAGGATGTCCTACGACATACAGCCCACTTCTAAAATGTGGTAATTTC
TGCAAAGGAGATTATGATTGCCCAGGTGGTCGAATTTGTTGCCCAAATAGATGTGGAAAC
TCTTGCGAATATGTACGCAAAGGGTAA
| SUPERFAMILY |
Sushi/SCR/CCP_sf (IPR035976) - T[306-373] 1.07E-9 |
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[309-371] 8.158 |
| SMART |
Sushi_SCR_CCP_dom (IPR000436) - T[311-369] 6.1E-9 |
| CDD |
Sushi_SCR_CCP_dom (IPR000436) - T[311-353] 1.93201E-5 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[423-460] 11.404 - T[514-554] 15.317 - T[606-644] 17.988 |
| SMART |
EGF-like_dom (IPR000742) - T[425-460] 2.3E-5 - T[517-554] 7.9E-4 - T[609-650] 0.0075 - T[657-700] 210.0 |
| Pfam |
EGF-like_dom (IPR000742) - T[426-455] 3.0E-5 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[426-460] 0.012 - T[514-554] 0.007 - T[606-650] 4.3E-4 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[446-459] . - T[540-553] . |
| Pfam |
EGF_dom (IPR024731) - T[520-553] 9.7E-7 - T[612-645] 8.4E-7 |
| ProSiteProfiles |
WAP_dom (IPR008197) - T[699-746] 12.367 |
| Pfam |
WAP_dom (IPR008197) - T[707-742] 1.8E-5 |
| SMART |
WAP_dom (IPR008197) - T[707-746] 0.0014 |
| Protein Name | Identity | Bit Score | e-value |
|---|