- Transcript 'Boleac.CG.SB_v3.S680...' >
- Transcript 'Cisavi.CG.ENS81.R54....' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S285.g00990.01.t
Possible name(s)
SMAD2; SMAD3; SMAD5
Gene model
Location
S285 [92,472 / 102,847]
Amino acid sequence
Length: 434
>Harore.CG.MTP2014.S285.g00990.01.p
MLQFTPPIVKELLGWKRGEMTAQDEKFAEKAIKSLVKKLKKSGGLEDLKKAVTQQSAETK
CVKIPRSLDGRLQVSHKKSLPHVLYCRLWRWPDLRNHHELRPVDICEFAFQLKRDEVCVN
PYHYTRVETPALPPILVPRQTEPVPIEFPPLDDWSMIPENATFEPGMQPSGNFTIPESPP
PGYMSEDGEFSDAGSAMSSPSPGNNYKNDGGTSSVRSVGSSVPSSATDDVHPVAYQEPPF
WCAISYYELNHRIGEAFHASQSSLTIDGFTDPSNSERFCLGLLSNINRTQHIEMTRRHIG
KGVRLYYIAGEVFAECLSDSAIFVQSPNCNRRYGWHPATVVKIPPGCHLKIFNNQEFAAL
LSQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQHVTSTPCWVEIHLNGPLQWLDKVL
QQMGAPQLPCSSIS
Nucleotide sequence
Length: 4,296
>Harore.CG.MTP2014.S285.g00990.01.t
AGATTGTGGTGACTGTTTATAAACTTGCATGTAAGTGTTTTTTAATAGATTTTAGTTCAC
GAAATGTTGCAGTTCACCCCACCTATTGTGAAAGAGCTACTCGGATGGAAAAGGGGCGAA
ATGACTGCCCAGGATGAAAAGTTTGCGGAAAAGGCGATAAAATCTCTTGTGAAAAAACTA
AAGAAGAGCGGAGGGTTGGAGGATCTTAAAAAAGCGGTGACGCAGCAATCCGCCGAGACG
AAATGTGTTAAAATCCCCAGATCATTAGATGGTAGACTTCAGGTGTCTCACAAAAAATCT
CTTCCACACGTCCTCTACTGCCGTTTGTGGCGATGGCCGGACCTACGAAATCATCACGAG
TTACGCCCGGTGGATATTTGCGAATTTGCCTTCCAGCTGAAAAGAGATGAAGTTTGCGTG
AACCCATACCATTACACACGGGTCGAGACGCCGGCACTGCCACCCATTCTCGTTCCGAGG
CAGACAGAACCTGTACCCATAGAATTCCCTCCATTAGATGACTGGTCGATGATCCCGGAA
AACGCGACCTTCGAACCTGGGATGCAGCCGTCCGGCAACTTCACCATCCCAGAGAGTCCT
CCTCCAGGATACATGAGCGAAGATGGAGAATTCAGTGACGCAGGATCCGCGATGTCAAGT
CCCTCGCCTGGAAACAATTATAAAAATGATGGAGGAACTTCGAGCGTTCGGTCGGTCGGA
TCCAGCGTCCCGAGCTCAGCGACTGACGACGTGCATCCGGTCGCGTATCAGGAGCCTCCG
TTCTGGTGTGCGATATCGTATTATGAACTCAATCACAGGATAGGTGAAGCTTTTCACGCG
TCACAATCTTCACTGACTATTGACGGCTTCACGGATCCCTCCAATTCGGAACGTTTCTGT
CTCGGTCTGTTGAGCAATATCAACAGGACGCAACACATTGAGATGACGAGAAGACATATA
GGAAAAGGTGTTCGTTTATATTATATCGCTGGTGAAGTATTCGCTGAGTGTTTGAGTGAC
AGCGCTATCTTTGTACAGAGTCCAAATTGCAATCGAAGATACGGATGGCATCCCGCTACT
GTCGTCAAAATCCCCCCAGGATGTCACCTGAAAATATTCAATAATCAGGAATTCGCTGCA
CTCTTGTCACAATCAGTCAATCAAGGTTTCGAAGCCGTTTATCAACTGACACGCATGTGT
ACGATTCGTATGAGTTTCGTCAAGGGATGGGGCGCCGAGTACAGACGGCAGCACGTTACT
TCTACCCCATGCTGGGTCGAGATTCATCTCAACGGTCCCCTGCAATGGCTCGATAAAGTT
CTTCAACAAATGGGAGCCCCCCAATTACCCTGCTCCAGTATTTCCTAATTTCGCAGTCAG
ATGTACAGGACAACAGTTATTTCTTACATAATATTTTTGACTTCCCCTTTTCACAGCGAT
ATTTTGAAGTTCTTGCTAATTTACTGCCTGTAGGGGCTTCAACCTTAAGATCCAAAACAT
AGTATATATAGTCTTGCCCATTGGCAAAAATCTGTCGGCTAAATGCCCCTTCAAGAGTCA
CAGGTGTACACAAAGGTATATGGAAGTGTTTCTGAATATGTGCCTTTATGTGCCTATTTT
ATCGGATCATCCACTTACTATTGTACTACAGTATTGCACTCTACATTATCCTTCGTAGTC
GTAACATTATTCAAGTTACAATTTGAAGATAATAGCAGTCGTATTGTCTGTAAGTCATAC
ATATGGGGGGTTCTGAGCAGCAAGCATTACTACTTTTACTATTTTTACCATTCCTATAAT
AACATAAAATGCAGATGATATTTTCTGGTATTTTTTAATGAAATGTTGCCTTCACCATAT
TTTTGATGGATTTCTCGATACTTTTTCAGTTATGTTTTTTTAAGATATTTGTTGCAACCT
GTCGTGTGTACATAAGACTTTTCATACTACATGTACAACACCGATTTCCCAGCAACTTCG
CTCCCACAGCCACGATTTGATTTATGGAACATGGAAGTACCAGCTCCTATGCAATTGTAA
GGGGAGTCCCAGCTCCAATTTGAGAAAAAATTATTGCAAAGGAAAGAAATGAGATATGAA
ATGGGTAGAAAATATCTAAGTTGACCGCATTTCATACACATTTTTGATACATGTTCAATA
CATATAATACAATTCTATGCAAATTGATGAATGTTATCGTAATGACAGTAGCAATTAACA
GTGCCTAATTGAAACTATCTCAAACAGAGAAATTCAAACTTTATAAGCGCTGGCCTATCA
GTACCAGTCCAGTATGCTACTTGTAACCCATTCAAAAGGTTACGGGGCACTCTTGGCTTT
GAGGTGGGGGGCTGAATTTTTGATGTACCCGAAATATTACTCGAATAAAATCACTAATCT
GATTTGCTGATTTTAATGACTAAGTTTTGTACTTTGCGTTAGCTCGATAATTTTCGCCCA
AGTTTAGGGGGTCCCGGCTGGTGAGCCTATGGGTGACGGTCAATCGGTGGTTGTATGTTT
TGATATATTTCATATTTTTAGTGCCTTACTCATTGATAATTGGAAATCTAGTATTAAACT
TCAGTGTCAATTTGTACAATTACGAAAATATTTGTAAGCAGTTTGAAATGGAGTCTACAT
TACCCATCTGGCATGAATGGATAATGAACATGAATAATTACAAAATATATCAATGCATAC
TGTTATTTCTTGACTTCAATATAAGAATTTATTACTATTTACAAACATAACAAGAATTCA
TGAACATGGTCTCAAATTTATCATATAGAAATACTAAAATCTTATTATCACAAATGTAAT
ACGTATTTACGATTTCAATTAAGTTAGAATTAATGACGTCACTCAAACTCAATTTCTATG
TTTTGTTTCATCAAATCTTAGTCTACGGATGACAGACTATCCCATAACACAAGCTCTTCA
AATTATTTAATATTATTAACCAGTATTTAGAGAGTAAAACAATTGCCTTTAAGACATCAT
AAAGCACATTTCTAGCCAAGTTTACAATGTCACAATAGCCAATGTTCTGAATTTTCACCG
AAATGGACCGAAATTCATCAAAAGAGAGTCCGGAGCGGCGAAGAGGTCCTGTATTTGTAA
AAAACCATTGACCATGTCACTTCAGCATACCCCTGTGCAATTTTCATACCGCAGAGTCAA
GAACCCTAGGAGTTATGCGTACACGAACACACATACAGTTTCTCCCCCTTTATATATAAG
AGCCTTAATACATGTAATGCAATATCAGGGGTAAGAAAAGAAGACTTTAGACAAAAAAGT
TACAGGTGGATAATTTTTGAAAAACTTCTAGAACTTCGAAGTCTGGAACATGCAAAGTTA
GGGTGATCCAAAGTACGAGGCACCAATGTAAAAAGACTAATTTTCATAATCAATATCACA
ACTTTTTCGCCTCCGAAATAAGACGTTTAACTCCGACCATCCATTGAATGACGACCGAAG
AATAATCGCACATCAAAGATACGTGAACATCCCATGCTTTGTCATATTTTTTCATCATTA
AAAATTTTGTCAACGAGATCATTCTCGATCTCACCTCGATCGGTAAATCGTTTAATTTTC
TCTCGAGAATCTCGATCTTCTTCAGGATGTTTCCTCCGACTGGCTTAGAAAATATTTTCG
CAGCTTCGCACCTTTCTATGATCAGTTTGAGTTCTCTGATTACATCCAAATTATCCGCAT
CAATGTCATCCTGGTCATTAACATCTTCCTTTTGGTTTATCTGGACAACTTCTTCGTCAT
TTGAATCTGGAGGATGACCCAAAGGATTCAATACTGTTGGTATTGATAAAGATGGAGAAA
CAGAATATATGTTTGTGGGATCAAGGAATTTTTCAGAGATTCTCTCATTAGAATTTTCTA
GTACAATCTGATCAAAACCTAGAGGAGCAGCGGACTGAGTGGGACGTGAAGGAGGAGAGG
ATGCTCCCTCACAACCTCCAGGAGGTAAAGATTCTTTCGAAAGCAGATCAGAGATTCCTT
TTTTGCCTCTTTCATCTACAACTGGATTACAAGGAGGCAAACTATGATCTGATGAGGCAA
CATTCTTATTTTTGATATCCGATCCTAGAGGTATTTTAAGATCCTGCAACCCGACTCTCT
TTGTGAGTAAGTTCTTCCGAGATGTAGTGTGTGCGTGGATTTCATACGAAAGTTTTGGGG
GGTCGTTCCAACCTGGACCCCCTGGGTTCATCGCAAAAATTGATTTTAGGATATATCAGG
TAATGGAAATTATTACGACTGAACTATGAAAGAACT
| Gene3D |
SMAD_MH1_sf (IPR036578) - T[1-141] 1.7E-63 |
| PANTHER |
Dwarfin (IPR013790) - T[2-202] 1.7E-230 - T[219-434] 1.7E-230 |
| SUPERFAMILY |
SMAD_MH1_sf (IPR036578) - T[7-128] 2.35E-46 |
| ProSiteProfiles |
MAD_homology_MH1 (IPR013019) - T[7-133] 35.776 |
| SMART |
MAD_homology1_Dwarfin-type (IPR003619) - T[23-131] 6.7E-56 |
| Pfam |
MAD_homology1_Dwarfin-type (IPR003619) - T[29-128] 5.3E-40 |
| SUPERFAMILY |
SMAD_FHA_dom_sf (IPR008984) - T[178-199] 7.46E-93 - T[229-424] 7.46E-93 |
| Gene3D |
SMAD-like_dom_sf (IPR017855) - T[232-434] 5.1E-96 |
| SMART |
SMAD_dom_Dwarfin-type (IPR001132) - T[239-410] 1.2E-100 |
| Pfam |
SMAD_dom_Dwarfin-type (IPR001132) - T[240-410] 5.3E-78 |
| ProSiteProfiles |
SMAD_dom_Dwarfin-type (IPR001132) - T[241-434] 73.996 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMAD3_HUMAN | 71.954 % | 642 | 0 |
| SMAD5_HUMAN | 56.842 % | 518 | 0 |
| SMAD2_HUMAN | 65.053 % | 611 | 0 |