- EST 'AHC0AAA230YL20_RM1' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S290.g03482.01.t
Possible name(s)
RLBP1; TTPA; TTPAL
Gene model
Location
S290 [119,435 / 122,351]
Amino acid sequence
Length: 279
>Harore.CG.MTP2014.S290.g03482.01.p
MSSRYECKLPVDLLQKAVTELKEPEDNDMRLAAIDKLRTEFQEKAGDLELVRSDDAFLLR
FLRARKFDQDRALETIINYHKQRKDWPELFELVNKPEQLEDLLTTGVVMPCGRAKNGTFV
IYWRLGLGFTNESDGILKVIAIIVLTMEKLLENEEMQIYGITMIEDMNNFGPTLAAQLAS
YAKKFIGLVQDAMPLRVKSLNVINEGVVFDIVFSVAKHFMKEKMKKRIHVIGSDYKPLHE
EIDPINLPFVLGGTGSDVNPDVWKRELLSTLGQGEDTAL
Nucleotide sequence
Length: 1,593
>Harore.CG.MTP2014.S290.g03482.01.t
ATTTTAATTATGTTCCTGACAAAACCTTATGCATGAAGTAGATACATGTTAATTCTGACT
GCTTTGAATTTTTTGAATTTGTATATATCCTCCTACGGTAGGATGTGCAGGTATTTCGGT
CTGGTAGGGAGGGCGGTTTAATTGGATTTTTGAACTGGGACATGGGGCCTGGGGCCTGGC
TTGGTTACCAGTAGCAACTTGTACTGGAACCACGTACTTAATTATTCATGCTTGACGACA
GAATCGGTGACGCTCTGGTAAACAAAGCGACGGAAATTTACGTTCAGTTCAGGTTTGATT
CTTGTTTGATATTTAAGTGTCGTATAAGATTCATGTCGTTTAGTTGTCATACTGTACAAA
ATGTCATCGAGATATGAATGTAAATTGCCAGTAGACCTTCTACAAAAAGCCGTAACAGAG
CTGAAGGAACCGGAAGATAATGATATGAGGTTGGCGGCAATTGACAAGCTAAGAACCGAA
TTTCAAGAAAAAGCAGGAGATTTGGAATTAGTTCGTTCCGATGATGCATTTTTATTGAGA
TTTTTGAGAGCTCGAAAATTTGACCAAGACAGGGCACTGGAAACTATCATAAACTATCAT
AAGCAGAGAAAGGACTGGCCAGAACTGTTTGAATTGGTCAACAAGCCAGAACAACTTGAG
GATTTGCTGACCACTGGAGTGGTGATGCCATGTGGGAGAGCAAAGAATGGTACATTTGTA
ATCTATTGGAGGCTAGGTTTGGGATTCACCAATGAGTCCGATGGCATATTAAAAGTGATT
GCTATCATTGTTTTGACGATGGAAAAACTACTTGAGAATGAAGAAATGCAGATTTATGGC
ATTACAATGATTGAAGATATGAATAATTTTGGACCAACACTTGCAGCACAACTTGCTTCT
TATGCTAAAAAGTTCATCGGCCTTGTACAGGATGCAATGCCCCTGCGTGTGAAAAGTCTT
AACGTGATCAATGAAGGTGTCGTCTTTGACATAGTTTTTAGCGTGGCCAAACACTTCATG
AAGGAAAAAATGAAAAAGAGGATACATGTTATTGGTTCAGATTACAAACCGCTTCACGAG
GAAATAGACCCGATCAACTTGCCTTTTGTCCTTGGTGGTACCGGGTCTGATGTCAACCCC
GACGTGTGGAAAAGGGAGTTGCTTAGTACTTTGGGTCAAGGAGAGGATACTGCTCTATAG
TATAAATCTACACAATGTTTTTGTTTGGTAATTTCTTTGATGCAATCTGTTTAGTTGATA
GTTAGATTGACAATTAATTTAGGCAAAAAATGGTATGGGTATAGTAATGGAATTGTTGTT
GTGTTGAGATCTTAAATAAGAGATTTTTAAGCAAATTCAGCCAACTCTTTCCTGAAATAG
ATTCCTGAAGATTGTCATTTACCTTGCTTTAAAAATTCGGAAGTAGAGATAACACCTAGT
TATTACTTTGAAGTTTATATATGCAAATTCATTAAACTACTTTCATAATGTCTCCCTCAT
GTTTTCATTGGCTGAAATTATCTCGCAATGCTGTTTTTATTGCAATGGCTTTTGTATTAT
TGTGATATGCACTTCATTCAATGTTAATTTAAT
| SUPERFAMILY |
CRAL/TRIO_N_dom_sf (IPR036273) - T[24-92] 9.94E-17 |
| Pfam |
CRAL/TRIO_N_dom (IPR011074) - T[34-77] 9.4E-8 |
| SMART |
CRAL/TRIO_N_dom (IPR011074) - T[54-79] 1.2E-9 |
| Gene3D |
CRAL-TRIO_dom_sf (IPR036865) - T[86-266] 1.5E-41 |
| ProSiteProfiles |
CRAL-TRIO_dom (IPR001251) - T[95-259] 15.4 |
| CDD |
CRAL-TRIO_dom (IPR001251) - T[96-254] 3.79909E-30 |
| SUPERFAMILY |
CRAL-TRIO_dom_sf (IPR036865) - T[100-260] 1.7E-35 |
| SMART |
CRAL-TRIO_dom (IPR001251) - T[101-256] 1.2E-17 |
| Pfam |
CRAL-TRIO_dom (IPR001251) - T[102-254] 7.8E-24 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TTPAL_HUMAN | 38.007 % | 169 | 1.28E-50 |
| RLBP1_HUMAN | 33.333 % | 125 | 7.19E-34 |
| TTPA_HUMAN | 35.323 % | 104 | 1.68E-26 |