- Transcript 'Moocci.CG.ELv1_2.S34...' >
- Transcript 'KH2012:KH.C10.45.v2....' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S291.g09670.01.t
Possible name(s)
ADGRB3; HMCN1; SEMA5A
Gene model
Location
S291 [50,082 / 57,914]
Amino acid sequence
Length: 795
>Harore.CG.MTP2014.S291.g09670.01.p
MKVYFFIFVASVINVTTAIGNGFHFGAWNQWTVCNQKGGGNAEQSRTRQCRTAICGGKNK
EVRPCKMPSCCTGTPWNEWSLCSVTCGTGEHRRHRSCEKNGKLCSEHGTRTCLLKNCKTP
DKDAERYRPWSEWSPCNATCSHGITKRHRECLRDTKPDTCREHQSKSCYDRSCSKNSADN
KNPTWNAWGSWGACSESCGGGRRSRTRTCQLDSRIQECTQEHILGICNEHHCGMQSDKVI
WNDWSNWSDCSTPCGPGNQRRTRTCKPGHSRSECAKGGQEFRGCNNPCKAQWGSWAPWSS
CDATCGQGHALRNRQCLNERQTTTCFGNATQIQICVIKNCKTWPQWAKWSPWRQCSSSCG
SGEIIKTRLCMNGTAISNACRGGHVRRISCRGNCTLANDWSEWSGCSETCGTGFRRRTRM
CLATRCKNPEGVENEECNTQQCGEGNYSQCGIAGDVRQILTGRQVARVVRGYNAARGAWP
WQVMIVNKAGNIRESLKTEFLGGGGSLVNNKYVLSASHMLGKDENNYLIILGLTVIPRKN
EEIPRHIQVYSVEKFETHEKFDKYDFDYDIALIKLGSRILFNNNGTFLEVKSPSPYVSFS
KYVRPICLPCIGAHEETKMYTIKYGVRVRVYEEENCDIEERKLISPKLGEGLAVVTGYGY
ITSRITNTEVSSRPEVLQQALLRMLDHGKCKEGVEKIVESIAWEAANYTTRMICTKSASA
TVISDACQGDSGGPLVRQIMRDDGSTQWVQVGIVSWGLGCATTLEVPGSSARYQIPGYYT
NVASLMSWITNILKI
Nucleotide sequence
Length: 2,388
>Harore.CG.MTP2014.S291.g09670.01.t
ATGAAAGTGTATTTCTTCATTTTCGTGGCGTCGGTCATAAATGTAACGACGGCAATTGGA
AATGGATTTCACTTTGGCGCATGGAATCAATGGACCGTTTGTAATCAGAAAGGTGGCGGA
AATGCCGAACAATCTCGTACACGGCAATGTAGGACTGCGATATGCGGTGGCAAAAACAAG
GAAGTGAGGCCATGTAAAATGCCAAGCTGTTGTACAGGGACTCCGTGGAATGAATGGTCT
CTGTGTAGCGTTACCTGCGGAACAGGAGAACATCGTAGACACAGAAGTTGCGAGAAAAAC
GGCAAATTATGCAGCGAACACGGCACCAGAACTTGTTTACTGAAAAACTGCAAAACACCA
GATAAAGACGCAGAACGTTACCGGCCTTGGTCTGAATGGTCTCCGTGTAATGCCACTTGC
AGTCACGGAATAACCAAACGTCATCGCGAATGTTTACGAGATACAAAACCTGACACTTGC
AGAGAGCATCAAAGTAAATCCTGCTATGATCGAAGCTGCTCAAAGAATTCTGCCGATAAT
AAAAACCCAACCTGGAACGCATGGGGGTCTTGGGGAGCATGTAGCGAATCGTGTGGCGGA
GGAAGACGCTCCCGCACAAGAACTTGCCAACTGGATAGTAGGATACAAGAATGCACTCAA
GAACATATACTGGGAATATGTAACGAGCATCATTGTGGAATGCAATCAGACAAAGTTATT
TGGAACGACTGGTCAAACTGGAGCGATTGCTCGACTCCGTGCGGTCCTGGAAATCAAAGA
AGAACACGAACCTGCAAGCCCGGTCATTCAAGAAGTGAATGTGCTAAAGGCGGCCAGGAA
TTTCGTGGCTGCAACAATCCGTGTAAAGCGCAATGGGGAAGTTGGGCTCCATGGTCATCA
TGTGACGCGACATGTGGACAAGGACACGCTCTACGAAATCGACAGTGCTTGAATGAAAGA
CAGACTACGACCTGCTTCGGGAATGCAACTCAGATACAGATTTGTGTTATCAAAAATTGT
AAAACTTGGCCACAATGGGCAAAATGGAGTCCGTGGAGGCAATGTTCATCGTCATGCGGA
TCGGGTGAAATCATCAAAACTCGGCTTTGTATGAACGGTACTGCAATTTCAAACGCATGC
AGAGGAGGCCACGTGCGACGAATCAGCTGCAGAGGAAACTGCACTCTTGCAAACGACTGG
TCAGAATGGAGTGGTTGCTCCGAAACCTGCGGTACAGGATTCAGAAGAAGGACGAGGATG
TGCTTAGCAACTAGGTGTAAGAATCCTGAGGGCGTAGAAAATGAAGAATGTAACACTCAG
CAATGCGGGGAAGGAAATTACAGCCAATGTGGGATAGCCGGCGACGTTCGCCAGATTCTA
ACAGGCCGACAGGTAGCACGCGTTGTGCGAGGTTATAACGCAGCAAGAGGTGCATGGCCG
TGGCAAGTTATGATTGTGAATAAAGCTGGAAATATTAGAGAGAGTCTAAAAACTGAATTC
CTCGGTGGAGGAGGTTCGCTGGTCAACAACAAATATGTCCTCAGCGCTTCTCACATGCTT
GGAAAGGACGAAAACAACTACCTCATTATACTAGGTCTCACCGTGATTCCAAGGAAAAAC
GAAGAGATTCCGAGACATATTCAGGTTTACAGTGTGGAAAAATTCGAGACTCATGAAAAG
TTCGATAAATATGATTTTGATTACGATATTGCACTGATAAAGCTAGGAAGCAGAATTCTG
TTCAACAATAACGGTACATTCTTGGAGGTCAAATCGCCGTCTCCCTACGTTAGCTTTTCA
AAATACGTCAGACCCATATGCCTGCCATGTATCGGTGCGCACGAGGAAACGAAAATGTAC
ACAATCAAATACGGCGTCAGAGTGCGGGTTTATGAAGAAGAAAATTGTGACATAGAAGAA
CGAAAACTCATTAGTCCAAAGTTGGGAGAAGGACTTGCCGTTGTGACCGGGTACGGCTAC
ATTACTTCGAGGATAACGAACACAGAAGTCAGCTCAAGGCCGGAAGTTTTACAACAAGCT
CTGCTGAGGATGCTAGATCACGGAAAGTGCAAGGAAGGAGTAGAGAAAATCGTGGAATCA
ATTGCCTGGGAAGCAGCAAATTACACAACAAGAATGATCTGTACGAAATCCGCAAGTGCA
ACTGTTATATCAGACGCATGTCAAGGTGACAGTGGCGGACCATTGGTCAGACAGATCATG
CGTGATGATGGATCGACACAGTGGGTTCAAGTCGGAATAGTGAGCTGGGGACTAGGATGC
GCAACGACTTTGGAAGTTCCGGGATCCAGCGCGAGGTATCAGATACCCGGATACTATACC
AACGTCGCATCTCTGATGTCTTGGATCACTAACATACTTAAAATCTGA
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[24-70] 6.93E-5 - T[71-117] 5.62E-6 - T[128-173] 1.7E-6 - T[182-214] 1.24E-8 - T[240-285] 6.15E-9 - T[287-340] 3.01E-10 - T[344-390] 4.32E-6 - T[398-442] 8.37E-8 |
| SMART |
TSP1_rpt (IPR000884) - T[25-71] 0.088 - T[73-118] 2.2E-6 - T[127-174] 5.2E-7 - T[185-233] 3.8E-7 - T[241-289] 2.6E-8 - T[292-341] 4.6E-10 - T[346-395] 0.086 - T[397-443] 2.2E-9 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[58-120] 8.4E-9 - T[121-176] 2.9E-8 - T[177-238] 1.2E-7 - T[239-287] 2.5E-8 - T[288-340] 1.8E-9 - T[344-389] 6.2E-5 - T[390-449] 1.6E-9 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[70-118] 10.743 - T[124-174] 10.31 - T[182-233] 10.478 - T[238-286] 9.895 - T[289-341] 11.001 - T[343-391] 9.166 - T[394-443] 11.441 |
| Pfam |
TSP1_rpt (IPR000884) - T[75-117] 4.7E-8 - T[129-173] 3.8E-7 - T[187-232] 4.9E-6 - T[243-287] 2.5E-7 - T[294-340] 9.8E-11 - T[348-390] 1.7E-4 - T[399-442] 5.7E-6 |
| SUPERFAMILY |
Peptidase_S1_PA (IPR009003) - T[462-612] 1.7E-50 - T[645-794] 1.7E-50 |
| SMART |
Trypsin_dom (IPR001254) - T[467-789] 3.9E-49 |
| ProSiteProfiles |
Trypsin_dom (IPR001254) - T[468-794] 26.1 |
| CDD |
Trypsin_dom (IPR001254) - T[468-792] 2.86774E-50 |
| Pfam |
Trypsin_dom (IPR001254) - T[469-625] 6.6E-18 - T[654-789] 1.7E-16 |
| PRINTS |
Peptidase_S1A (IPR001314) - T[504-519] 1.8E-7 - T[724-736] 1.8E-7 |
| ProSitePatterns |
TRYPSIN_SER (IPR033116) - T[725-736] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 32.812 % | 143 | 8.66E-35 |
| AGRB3_HUMAN | 36.62 % | 119 | 2.45E-27 |
| SEM5A_HUMAN | 28.777 % | 124 | 5.49E-29 |