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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S29.g02115.01.t

Possible name(s)

RPUSD3; RPUSD4

Location

S29 [389,780 / 390,794]

Sequences

Amino acid sequence

Length: 337

>Harore.CG.MTP2014.S29.g02115.01.p
MRALSQLFKTSLTIRKGFPRNGSSSPKILWFDYVDKQKDDLKTADGLVNHLMNNIIFENE
HIIAFNKPSNVHPYTPKLAVKEGYILNESISIEKILFSVAEKCNCQSLFFCHTPHIYCSG
VMMFAKSQKMQNNVGQMFKMVKSRNESAKTDLAVTVGVPSPPSGCITDHIVQEEIGGIKT
LVPLFNPSSSKLRTLRKYRTYYEVIDSNNDIALVKLQPKGNLSLQAVVHMTCKLCPILGD
QTYSHRIFSLSGVKMMKDPESIVPRPQSLPPYVTKRLNLHSNDLIMKLPLHLHRHKISFP
ANPKIGFPDRLDIVAPLPQHFLLTLQLLNLKMCDDKL

Nucleotide sequence

Length: 1,014

>Harore.CG.MTP2014.S29.g02115.01.t
ATGAGAGCGCTTTCCCAACTATTTAAAACTTCCCTCACCATCAGAAAAGGATTTCCTCGC
AATGGAAGCAGCAGCCCAAAAATACTGTGGTTCGACTACGTTGATAAGCAAAAAGACGAT
TTGAAAACGGCAGATGGACTCGTCAATCATTTAATGAATAATATTATATTTGAAAATGAA
CACATTATCGCATTCAACAAACCGAGCAACGTTCATCCCTATACTCCGAAGCTTGCCGTA
AAAGAAGGCTATATTCTGAACGAATCAATCTCCATAGAGAAGATTTTGTTCTCTGTTGCT
GAAAAATGTAACTGTCAGAGTTTGTTTTTTTGCCACACTCCTCATATCTATTGCTCGGGT
GTGATGATGTTCGCAAAGTCTCAGAAAATGCAAAACAACGTAGGACAAATGTTTAAAATG
GTCAAATCAAGAAACGAGTCTGCGAAAACAGATCTAGCCGTCACTGTCGGCGTCCCATCT
CCACCCTCTGGATGCATCACCGATCATATCGTACAGGAAGAAATAGGAGGCATTAAAACC
CTGGTTCCTTTATTCAATCCTTCGAGTAGCAAACTAAGAACATTAAGAAAATATAGAACT
TATTACGAAGTAATAGATTCGAATAACGACATTGCTTTAGTGAAATTACAGCCAAAAGGT
AATTTGTCTTTGCAGGCTGTGGTCCACATGACTTGCAAATTGTGTCCTATCCTGGGTGAT
CAAACCTACTCCCACCGAATATTCAGCCTTTCTGGCGTGAAGATGATGAAAGACCCCGAA
TCTATTGTACCACGACCCCAGTCTCTCCCGCCTTACGTTACAAAGAGACTTAACCTCCAC
AGCAACGACTTGATCATGAAATTGCCGCTTCATTTGCACAGACACAAAATTTCTTTCCCC
GCTAATCCGAAAATCGGTTTCCCTGATCGGTTGGACATTGTTGCGCCGTTACCTCAGCAT
TTTCTTTTAACTTTGCAATTGTTAAATTTAAAGATGTGTGATGACAAATTGTAG

InterProScan

SUPERFAMILY
PsdUridine_synth_cat_dom_sf (IPR020103) - T[54-260] 2.73E-18 - T[289-329] 2.73E-18
Pfam
PsdUridine_synth_RsuA/RluD (IPR006145) - T[103-219] 2.9E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RUSD4_HUMAN 28.383 % 91.3 1.45E-20
RUSD3_HUMAN 25.597 % 89 6.84E-20