Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S29.g10098.01.t

Possible name(s)

HAGHL; LACTB2; PNKD

Gene model

Harore.CG.MTP2014.S29.g10098

Location

S29 [440,467 / 441,343]

Sequences

Amino acid sequence

Length: 291

>Harore.CG.MTP2014.S29.g10098.01.p
MTTAIPKVSQLSSRVIRVLGCNPSPMTLKGTNTYIVGTGTNRILIDTGNPNVPEYITNLK
NTLRDNNISLNGIILTHWHMDHVGGIPDIEKGILGSCKVPLYKFKRRSDDWRSEKPPESD
SSYTFVKDGTILKTEGATLRLIYTPGHTDDHMAIFLEEEKNVFSADCILGEGTAVFEDLY
DYMNSLHALLNLKPSRIYPGHGPVIEEPTPGIQQYIDHRNKRESQITNALKEGGCAMESM
DIVKKVYHDVPEILHAPANVNVHNHLVKLEKEGKVKKEVDDKWVLINLSSL

Nucleotide sequence

Length: 876

>Harore.CG.MTP2014.S29.g10098.01.t
ATGACAACAGCTATCCCAAAAGTCAGTCAATTATCCAGCAGAGTCATTCGTGTATTAGGA
TGCAACCCTTCACCTATGACTTTGAAAGGAACCAATACTTATATCGTGGGAACAGGTACC
AATCGAATTCTGATTGACACAGGCAATCCCAATGTGCCCGAATATATCACAAACCTAAAA
AACACTCTGCGCGACAATAACATTAGTCTTAATGGAATTATCTTGACTCATTGGCACATG
GACCACGTTGGCGGCATTCCCGATATCGAGAAAGGTATTTTGGGTTCCTGCAAAGTGCCT
TTGTATAAATTTAAACGAAGATCGGATGACTGGCGGTCAGAAAAACCTCCAGAAAGCGAT
TCGTCATACACTTTTGTCAAAGATGGGACAATTTTAAAAACGGAAGGGGCAACCTTAAGG
CTTATATATACCCCTGGTCACACCGACGACCACATGGCCATATTTTTAGAGGAAGAGAAA
AACGTGTTTTCTGCCGACTGCATTTTGGGAGAAGGAACTGCAGTGTTTGAGGATCTTTAC
GATTACATGAATTCACTTCACGCTTTGTTGAATCTCAAACCGAGCCGGATCTATCCGGGA
CACGGTCCGGTTATTGAGGAGCCGACACCAGGGATTCAGCAATATATTGACCACAGGAAC
AAACGCGAGAGTCAAATAACAAATGCTCTGAAAGAAGGTGGCTGTGCAATGGAGAGCATG
GATATTGTAAAAAAAGTATATCATGATGTTCCCGAGATTCTTCATGCTCCTGCAAATGTG
AATGTCCACAACCATCTTGTTAAACTTGAAAAGGAAGGGAAAGTTAAGAAAGAGGTTGAC
GATAAATGGGTTTTAATTAATCTAAGTTCGTTATGA

InterProScan

Gene3D	RibonucZ/Hydroxyglut_hydro (IPR036866) - T[1-206] 8.8E-73
SUPERFAMILY	RibonucZ/Hydroxyglut_hydro (IPR036866) - T[8-276] 3.67E-51
Pfam	Metallo-B-lactamas (IPR001279) - T[29-201] 6.5E-20
SMART	Metallo-B-lactamas (IPR001279) - T[30-201] 8.2E-30
Gene3D	WH-like_DNA-bd_sf (IPR036388) - T[208-285] 2.7E-25

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
LACB2_HUMAN	54.545 %	290	2.01E-98