- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S2.g02981.01.t
Possible name(s)
CHI3L1; CHIA; CHIT1
Gene model
Location
S2 [176,027 / 182,664]
Amino acid sequence
Length: 639
>Harore.CG.MTP2014.S2.g02981.01.p
MDEDLVVILKPILRNSRDSWTVKMKLDVPLLICCLAAMIAGQGVAEAYGKNYVCYFTNWS
QYRPEGRKFFPEDVDPNLCTHIPYSFVEIGSNNELKFREWNGADLVKRLVSLKQSNKDLK
ITAAVGGWNFGTERFTAVCDSNVTMEHFARTTVTFLRTHGFDGLDLDWEYPGSRGSPPED
RIRFTKLCEILMHEFKLDSDATQERLILTAAVAAGIETIQAGYEVAKICNILDLVHLMTY
DFFGGSWAASTDHNSPMFASVHYNDTEDLFNVDSGVKIWLHYGCDPDKLVLGIPTYGRTF
QLADESDNDYGAPAIGPGDAGRYTREVGFLAYYEICDYENDPSNILIDNVYSQAPVVVHG
DQWIAYDNEASVRNKVAYMKSNDLAGVMIWALDLDDFTGHCSTEGKNLLLRAIKDELYDG
AFDKNPCYVEASIPPVTWVPPTGPVTPVPPEYVCFYKDPPCDCSNFTPVSTTTNGNNVGS
TTTATTTTELPPCEGKDCGISCVDGDGFYPDFDDCQCYYICSGQTSSHHCCANGLFWSDQ
YNQCDWESNVNCPVIETTTETAISPTQSTLSTESTTTPTSSTTSTTTVSSSDNFCEGKPD
GNYPDPNDNTLFHMCAHGQDTIYHCGNGLIYVNGVCNWP
Nucleotide sequence
Length: 1,920
>Harore.CG.MTP2014.S2.g02981.01.t
ATGGATGAGGACCTAGTGGTTATACTCAAACCCATTCTAAGAAATTCAAGAGACAGTTGG
ACTGTGAAAATGAAATTAGATGTTCCATTATTGATTTGCTGTCTGGCAGCGATGATTGCA
GGACAGGGAGTTGCAGAAGCTTATGGGAAAAATTATGTGTGCTATTTCACCAATTGGTCG
CAATATAGACCGGAAGGGCGAAAATTTTTCCCAGAGGATGTGGATCCAAACCTTTGCACC
CACATTCCATATTCCTTTGTCGAAATCGGCTCAAATAACGAGTTGAAATTTCGGGAATGG
AATGGAGCTGACCTAGTAAAGAGACTTGTGTCGCTGAAACAATCCAACAAAGACCTCAAA
ATAACAGCGGCTGTAGGAGGCTGGAACTTTGGAACGGAACGATTCACTGCAGTTTGCGAT
TCTAATGTGACAATGGAGCATTTTGCGAGAACAACCGTAACGTTTCTGAGAACACATGGA
TTCGATGGGCTGGATCTCGATTGGGAATATCCAGGTAGCAGAGGCTCCCCACCTGAAGAC
AGGATAAGGTTTACAAAACTTTGTGAGATATTGATGCATGAATTCAAGTTAGATTCAGAT
GCTACACAAGAAAGACTCATACTTACAGCAGCTGTAGCCGCTGGTATAGAGACTATCCAA
GCTGGTTATGAAGTAGCGAAAATTTGCAATATTCTCGATCTCGTCCATCTGATGACATAC
GACTTCTTTGGTGGTAGCTGGGCTGCATCTACAGATCATAATAGTCCAATGTTTGCTTCA
GTGCATTACAATGATACGGAAGATTTGTTCAATGTCGATAGTGGTGTGAAAATTTGGCTG
CACTATGGTTGTGATCCTGATAAGTTAGTTCTAGGAATCCCAACATATGGAAGGACATTC
CAGCTGGCCGACGAATCTGATAATGATTATGGAGCTCCAGCAATAGGTCCAGGAGATGCT
GGTCGATACACTCGTGAAGTTGGCTTCCTCGCGTATTATGAGATCTGTGATTATGAGAAC
GACCCATCCAATATTCTAATCGATAACGTCTATTCTCAAGCCCCAGTTGTTGTGCATGGA
GATCAATGGATTGCTTATGATAATGAAGCATCTGTCAGAAATAAGGTTGCATACATGAAA
AGTAATGATCTTGCTGGAGTGATGATATGGGCATTAGATCTTGATGACTTTACCGGACAC
TGTTCTACTGAGGGGAAAAATCTTCTTTTGAGAGCTATAAAAGACGAGCTTTACGATGGA
GCATTTGACAAAAACCCATGCTATGTTGAAGCCTCAATACCACCTGTTACTTGGGTGCCT
CCTACCGGTCCAGTAACACCAGTTCCACCAGAGTATGTTTGCTTTTACAAAGATCCCCCA
TGTGATTGTTCTAATTTTACCCCGGTATCAACAACCACTAACGGCAACAACGTAGGGTCC
ACAACAACTGCAACAACCACTACAGAGCTCCCACCTTGCGAAGGAAAAGATTGTGGAATT
AGTTGTGTTGATGGTGATGGATTTTATCCTGATTTCGACGACTGCCAGTGTTACTATATT
TGTTCAGGCCAGACAAGCTCTCATCACTGTTGTGCTAATGGACTATTTTGGAGCGATCAG
TATAATCAGTGTGACTGGGAAAGTAATGTAAACTGCCCAGTTATCGAAACAACTACAGAA
ACAGCTATATCTCCAACCCAATCAACCTTGTCTACCGAAAGTACTACCACACCCACCTCA
TCCACCACCTCCACTACCACAGTGAGTTCATCTGATAACTTCTGTGAGGGTAAACCAGAT
GGCAACTACCCAGATCCCAACGACAATACATTATTCCATATGTGCGCACATGGGCAGGAT
ACTATATATCATTGTGGTAATGGTCTTATTTATGTAAACGGTGTCTGCAATTGGCCTTGA
| SMART |
Chitinase_II (IPR011583) - T[50-395] 3.0E-120 |
| SUPERFAMILY |
Glycoside_hydrolase_SF (IPR017853) - T[52-296] 7.1E-88 - T[367-417] 7.1E-88 |
| Pfam |
Glyco_hydro18_cat (IPR001223) - T[52-395] 4.0E-76 |
| ProSitePatterns |
Glyco_hydro_18_chit_AS (IPR001579) - T[161-169] . |
| Gene3D |
Chitinase_insertion_sf (IPR029070) - T[295-366] 2.2E-134 |
| SUPERFAMILY |
Chitinase_insertion_sf (IPR029070) - T[296-366] 2.29E-18 |
| SMART |
Chitin-bd_dom (IPR002557) - T[491-554] 7.6E-5 - T[593-639] 0.14 |
| ProSiteProfiles |
Chitin-bd_dom (IPR002557) - T[499-554] 10.26 - T[592-639] 8.928 |
| Pfam |
Chitin-bd_dom (IPR002557) - T[502-552] 4.8E-8 - T[595-639] 2.2E-7 |
| SUPERFAMILY |
Chitin-bd_dom_sf (IPR036508) - T[502-559] 2.41E-11 - T[586-639] 1.6E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CH3L1_HUMAN | 43.188 % | 307 | 6.02E-99 |
| CHIA_HUMAN | 40.194 % | 311 | 2.64E-99 |
| CHIT1_HUMAN | 38.384 % | 348 | 1.56E-113 |