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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R26....'
  2. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S2.g03125.01.t

Possible name(s)

CHPF; CHSY1; CHSY3

Location

S2 [851,358 / 853,059]

Sequences

Amino acid sequence

Length: 489

>Harore.CG.MTP2014.S2.g03125.01.p
MNSKAVHLTGSVLIRQLHVSRILTGLLLGFSMHLIYQFIITMSTKDAMLARYNQNCPPCE
DPSRVRAEPCPVCGATVVTMDKDSMVVDSYKPKGMYEVTRWYYFDEEYLYDIINGKPKVK
LLGSWYEETKAVTQVGLEYINANEMLGKTWSLVRLKNGYLRRDVFRGTDYILDIAVKSME
KHPSESISCAFRVRLVHAFEKGLQVLEMTQENEVNIHIVAPVSGDEKTLESFVRRYVNQA
AKQNNKNIEITLVLFKGMGLFGEKSGQLKPLVERLIEENSNSHIKYIELAGDYNFLKGIQ
HGTANAKSGEVILTLKMEMAFGQNLLETCRIIPKNQKRVYFPIAFSQYDPDIIERGMPPG
KPRNINKLDINKFTGYWTHKVHDFMCMYYDDAVPALNKVLRSVENNAKLFYDIGSEGGVC
MYDTFLLGNLDVISAVEPDLVRMYHKRTCDKSILSKNDYHQCVQLKAETIGSKPALSILY
ITEIEQKKV

Nucleotide sequence

Length: 1,470

>Harore.CG.MTP2014.S2.g03125.01.t
ATGAATTCCAAGGCCGTTCATTTGACGGGTTCGGTCTTAATTAGGCAACTGCATGTGTCA
AGAATTTTGACAGGATTGTTGCTTGGCTTCAGCATGCATCTGATTTACCAGTTCATCATC
ACTATGTCAACAAAAGATGCCATGCTTGCACGGTACAACCAAAACTGTCCGCCATGCGAA
GATCCTAGTAGGGTTCGCGCTGAGCCCTGTCCAGTCTGTGGAGCGACAGTAGTAACTATG
GATAAAGATTCGATGGTGGTCGACTCATACAAGCCGAAGGGAATGTACGAAGTGACAAGA
TGGTATTACTTTGATGAAGAATACTTGTATGACATCATAAATGGAAAACCCAAAGTAAAA
CTGCTGGGAAGCTGGTACGAAGAAACCAAAGCCGTGACTCAGGTCGGATTAGAGTACATA
AACGCTAATGAAATGCTTGGAAAGACATGGAGTTTGGTCCGGCTCAAGAATGGTTATTTG
CGGAGAGATGTGTTCCGTGGGACAGACTATATCTTGGACATCGCTGTCAAATCGATGGAA
AAACATCCGTCGGAAAGTATAAGCTGTGCGTTTCGAGTTCGCTTGGTTCATGCCTTTGAA
AAGGGCTTGCAGGTTCTCGAGATGACGCAAGAAAACGAAGTTAATATACATATCGTTGCG
CCAGTTTCAGGGGATGAAAAAACTTTAGAATCATTCGTGAGAAGGTATGTGAATCAAGCC
GCCAAACAGAACAACAAAAACATCGAGATAACGCTTGTACTATTCAAAGGAATGGGACTC
TTTGGAGAGAAGAGTGGTCAGCTGAAACCATTAGTAGAACGACTTATAGAAGAGAATTCG
AATTCTCACATAAAATATATCGAATTGGCAGGTGACTACAATTTCTTGAAAGGGATTCAG
CATGGAACAGCTAATGCAAAATCAGGCGAAGTAATACTGACATTAAAAATGGAGATGGCG
TTTGGACAAAACCTTCTGGAAACGTGCAGGATAATACCAAAGAACCAGAAACGGGTTTAT
TTTCCCATCGCATTCAGCCAGTATGACCCCGACATAATAGAACGTGGCATGCCGCCAGGC
AAACCGAGAAACATTAATAAATTGGACATCAACAAATTCACTGGATATTGGACACACAAA
GTTCACGACTTCATGTGCATGTACTATGATGATGCAGTACCTGCTTTGAACAAAGTGCTC
AGATCCGTGGAAAACAATGCTAAACTTTTTTATGATATCGGCAGTGAGGGGGGTGTGTGT
ATGTATGACACTTTTTTATTAGGCAATTTAGATGTTATCTCAGCGGTTGAACCGGATCTT
GTGAGAATGTACCACAAGAGGACTTGTGATAAAAGTATTCTGTCTAAGAATGATTATCAT
CAATGTGTTCAACTCAAAGCAGAAACAATAGGTTCCAAACCTGCATTAAGTATTCTCTAT
ATCACTGAAATTGAACAGAAAAAAGTTTGA

InterProScan

Pfam
Chond_GalNAc (IPR008428) - T[89-476] 8.1E-65

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CHSS3_HUMAN 22.5 % 98.2 1.24E-21
CHSS1_HUMAN 21.778 % 87 5.5E-18
CGAT2_HUMAN 23.724 % 85.9 7.01E-18