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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L18.14.v2....' > 
  2. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S2.g04330.02.t

Possible name(s)

CLTA; CLTB

Gene model

Harore.CG.MTP2014.S2.g04330

Location

S2 [817,117 / 818,433]

Sequences

Amino acid sequence

Length: 273

>Harore.CG.MTP2014.S2.g04330.02.p
MADLFDNDFADAAPPATQTTPEEDPAAAFLAREENEIAGLESEALGIPDDEFVPVADQTT
EVTVNGFDDMLQSNEGYQENLGNDDDFFNAPVTQQDTNFLNGGLENESEVEQMDPSQAYA
AIAAADARIQQLRSEPEKIVQWREEHNKMLEDKGKINNFLRLTYLLIHSFFGKSDLAEEE
KKQQWVDTAKKELEDWEKNRLEQLQKTKENNRIAEDEFIKERDFNRPGSDWEKVAKLCDF
NPKVSKSTKDVSRMRSTLLQIKQHNVAKPTKAA

Nucleotide sequence

Length: 858

>Harore.CG.MTP2014.S2.g04330.02.t
AATTTAAATAAATAAACAAAACACTTCCATCCTAAAATGGCTGATTTATTCGATAATGAT
TTTGCGGATGCAGCGCCACCTGCGACACAAACAACGCCGGAGGAAGATCCAGCCGCAGCA
TTTCTAGCCCGGGAAGAAAACGAAATCGCAGGCTTGGAGAGCGAAGCATTAGGTATCCCT
GACGATGAATTTGTTCCAGTAGCTGATCAGACGACTGAAGTGACCGTAAATGGGTTTGAT
GATATGCTACAATCCAATGAAGGATATCAAGAAAACTTAGGAAATGATGATGACTTCTTT
AATGCTCCGGTCACACAGCAAGACACGAATTTCCTTAATGGAGGGCTAGAAAATGAATCC
GAAGTAGAACAAATGGATCCTTCTCAAGCCTATGCTGCTATCGCAGCCGCTGATGCACGG
ATACAACAGTTGAGATCTGAACCGGAAAAAATTGTTCAGTGGCGTGAAGAACATAACAAA
ATGTTGGAAGATAAAGGCAAGATAAATAATTTTTTGAGATTGACTTACCTTTTAATTCAT
TCCTTTTTTGGTAAATCAGATTTGGCAGAAGAGGAAAAGAAACAACAATGGGTTGACACA
GCCAAGAAAGAATTGGAAGACTGGGAGAAAAATCGTCTTGAACAACTACAAAAAACCAAG
GAAAACAACAGAATCGCAGAGGATGAATTCATCAAAGAACGGGATTTTAATAGGCCCGGA
TCAGACTGGGAGAAAGTGGCAAAGCTATGTGATTTTAACCCAAAAGTTAGTAAAAGCACC
AAAGACGTGTCGCGCATGCGTTCCACGCTTCTCCAGATAAAACAGCACAATGTAGCCAAA
CCTACGAAAGCCGCCTAA

InterProScan

Pfam
Clathrin_L-chain (IPR000996) - T[1-155] 6.0E-15 - T[173-265] 5.6E-31
PANTHER
Clathrin_L-chain (IPR000996) - T[16-152] 7.6E-37 - T[175-269] 7.6E-37

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CLCB_HUMAN 34.749 % 120 3.91E-33
CLCA_HUMAN 33.7 % 121 2.81E-33