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- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S2.g08472.01.t
Possible name(s)
CLPB; KIDINS220; TOR1B
Gene model
Location
S2 [403,128 / 405,063]
>Harore.CG.MTP2014.S2.g08472.01.p
MAHRLLRQLLVSRNRFPTGILRKFSPVTASHHVGYMKHNMVQSQVPHRFIHFSSNYNKAT
GMKLYPITLLAILLTSDREDNKHLKLRNSLLHYALNGDVYSLKQVLNKIKALNSDEQHEI
LNCRHPYGWTPLMCAAIRGNLEAIHALIKAGADPDLGDHYTTARRTARSMRVHELDVLRE
RDLFSDQLNPYSNFKGFTALHYAVIQDSSAAVKALLDGDANPLATNHLGHKASEYVSEEN
DALYNLLFRYEEERAAKKKEAEIRERLRYPLEQRIKEHIIGQEGPIATVSSCIRRKQNGW
YDEQHPLVFFFLGSSGVGKTELAKQVANYLHQGDKTAFIRLDMSEYQEKHEVAKLIGAPP
GYIGHDQGGQLTKKLQAKPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGQGRTIECKD
AIFVMTSNLASDEIAQYGARLRQEAAETKRNRLEGDSNEQNIRTADKVDVSHTFKENVVR
PILKRHFGRDEFLGRINEFVYFLPFSDEELMKLVEKELVMWKEIAFKKHSVHLTWQKPFV
SIILADGYNIHYGARSIKYEVDRRVVSLLASAHERGMLKKGFKVHVSTPATNEELSNASD
LVKAMIQLEITSSESNQKPVVISETDVWNWHNAAENNLKKLASC
>Harore.CG.MTP2014.S2.g08472.01.t
ATGGCTCACAGACTGCTAAGACAGTTGTTGGTGAGCCGCAACAGATTTCCTACTGGCATT
CTGAGAAAATTTTCACCTGTAACTGCTTCTCATCACGTGGGGTACATGAAACATAACATG
GTCCAATCCCAGGTGCCCCATCGATTTATTCATTTTTCTTCGAATTATAATAAGGCGACC
GGAATGAAACTCTACCCAATAACTTTGTTAGCCATTCTTCTCACGAGTGACAGGGAAGAT
AATAAACATTTGAAACTGAGGAATTCCCTCTTGCATTACGCACTAAATGGAGACGTATAT
TCATTGAAACAGGTCTTGAATAAAATAAAAGCTCTGAACTCAGACGAACAACACGAAATT
CTAAATTGCAGGCATCCATATGGCTGGACGCCTCTTATGTGTGCTGCGATTCGGGGCAAT
CTTGAGGCTATTCATGCCTTGATAAAAGCAGGTGCCGACCCAGATCTTGGTGACCATTAT
ACAACAGCTAGGAGAACTGCACGCAGCATGCGGGTGCACGAGCTTGACGTGCTAAGAGAA
AGAGACTTGTTTTCAGATCAACTCAATCCTTATTCTAATTTCAAAGGATTCACAGCATTG
CATTATGCGGTGATTCAAGACTCTTCAGCAGCTGTCAAAGCACTTCTTGATGGTGACGCG
AACCCTCTTGCCACAAACCATCTCGGACACAAAGCCAGTGAGTATGTGAGCGAAGAAAAT
GATGCACTGTACAATTTATTATTCAGATACGAAGAGGAACGTGCTGCAAAAAAGAAAGAA
GCAGAAATACGGGAAAGACTCCGGTATCCTTTGGAACAGAGAATTAAAGAACATATTATT
GGACAGGAAGGTCCTATAGCAACCGTGTCATCCTGCATACGGAGGAAGCAGAACGGATGG
TATGATGAACAACATCCTTTGGTTTTTTTCTTCTTAGGTTCCTCTGGCGTGGGGAAAACA
GAGTTAGCTAAACAAGTAGCCAATTATCTCCATCAGGGAGATAAAACAGCATTTATTCGT
TTGGACATGTCTGAATACCAAGAGAAACATGAAGTTGCCAAACTGATAGGTGCCCCTCCA
GGATACATAGGCCATGATCAAGGCGGTCAGCTGACAAAAAAGTTACAGGCAAAGCCGAAT
GCGGTCGTTTTGTTTGATGAAGTGGATAAGGCCCACCCTGATGTTCTAACGGTCCTATTA
CAATTGTTTGATGAAGGGCGATTGACTGACGGTCAGGGTCGTACTATCGAGTGCAAAGAT
GCTATTTTCGTCATGACTTCAAACCTCGCTTCTGACGAAATTGCCCAGTATGGTGCAAGA
TTGAGGCAAGAGGCTGCAGAAACAAAAAGGAACCGGCTAGAGGGCGACTCAAATGAGCAG
AACATCAGAACGGCTGACAAAGTTGACGTTTCTCACACTTTCAAGGAGAATGTAGTTCGA
CCAATTTTGAAGCGTCATTTCGGCCGTGACGAGTTTCTAGGCAGAATTAATGAATTTGTT
TACTTTTTGCCCTTTTCCGACGAAGAACTGATGAAGCTTGTTGAAAAGGAGCTGGTCATG
TGGAAGGAAATTGCTTTCAAAAAGCACAGCGTCCATTTAACTTGGCAAAAGCCTTTCGTT
TCTATAATATTAGCAGACGGATATAACATCCATTATGGAGCCAGGTCGATAAAGTATGAA
GTCGATAGGAGAGTAGTAAGCCTGCTTGCAAGCGCTCATGAAAGAGGGATGCTCAAGAAG
GGCTTCAAGGTTCATGTAAGTACGCCGGCAACGAATGAGGAGTTAAGCAATGCCAGTGAC
TTGGTCAAAGCCATGATTCAGCTGGAGATCACTTCATCAGAGTCAAATCAAAAGCCCGTC
GTAATAAGCGAAACCGATGTATGGAACTGGCATAATGCTGCTGAAAACAATCTAAAAAAA
TTAGCTTCATGTTAA
Gene3D |
Ankyrin_rpt-contain_sf (IPR036770) - T[73-243] 2.9E-20 |
Pfam |
Ankyrin_rpt-contain_dom (IPR020683) - T[83-156] 9.9E-7 |
SMART |
Ankyrin_rpt (IPR002110) - T[85-114] 780.0 - T[127-156] 2.6E-6 - T[195-224] 0.015 |
SUPERFAMILY |
Ankyrin_rpt-contain_sf (IPR036770) - T[88-239] 3.11E-17 |
CDD |
Ankyrin_rpt-contain_dom (IPR020683) - T[122-239] 3.63373E-14 |
ProSiteProfiles |
Ankyrin_rpt (IPR002110) - T[127-159] 12.022 - T[195-227] 9.671 |
ProSiteProfiles |
Ankyrin_rpt-contain_dom (IPR020683) - T[127-227] 15.008 |
Pfam |
Ankyrin_rpt (IPR002110) - T[196-226] 2.9E-4 |
SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[270-449] 2.24E-47 - T[480-579] 2.24E-47 |
SMART |
AAA+_ATPase (IPR003593) - T[305-451] 6.5E-9 |
Pfam |
ATPase_AAA_core (IPR003959) - T[308-498] 1.5E-43 |
PRINTS |
ClpA/B (IPR001270) - T[309-327] 6.9E-32 - T[355-373] 6.9E-32 - T[384-402] 6.9E-32 - T[417-431] 6.9E-32 |
Pfam |
Clp_ATPase_C (IPR019489) - T[506-586] 2.4E-8 |
Protein Name | Identity | Bit Score | e-value |
---|---|---|---|
CLPB_HUMAN | 53.996 % | 548 | 0 |