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TRANSCRIPT CARD

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  1. Transcript 'Moocul.CG.ELv1_2.S40...'
  2. Transcript 'Boleac.CG.SB_v3.S928...'
  3. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S2.g08472.01.t

Possible name(s)

CLPB; KIDINS220; TOR1B

Location

S2 [403,128 / 405,063]

Sequences

Amino acid sequence

Length: 644

>Harore.CG.MTP2014.S2.g08472.01.p
MAHRLLRQLLVSRNRFPTGILRKFSPVTASHHVGYMKHNMVQSQVPHRFIHFSSNYNKAT
GMKLYPITLLAILLTSDREDNKHLKLRNSLLHYALNGDVYSLKQVLNKIKALNSDEQHEI
LNCRHPYGWTPLMCAAIRGNLEAIHALIKAGADPDLGDHYTTARRTARSMRVHELDVLRE
RDLFSDQLNPYSNFKGFTALHYAVIQDSSAAVKALLDGDANPLATNHLGHKASEYVSEEN
DALYNLLFRYEEERAAKKKEAEIRERLRYPLEQRIKEHIIGQEGPIATVSSCIRRKQNGW
YDEQHPLVFFFLGSSGVGKTELAKQVANYLHQGDKTAFIRLDMSEYQEKHEVAKLIGAPP
GYIGHDQGGQLTKKLQAKPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGQGRTIECKD
AIFVMTSNLASDEIAQYGARLRQEAAETKRNRLEGDSNEQNIRTADKVDVSHTFKENVVR
PILKRHFGRDEFLGRINEFVYFLPFSDEELMKLVEKELVMWKEIAFKKHSVHLTWQKPFV
SIILADGYNIHYGARSIKYEVDRRVVSLLASAHERGMLKKGFKVHVSTPATNEELSNASD
LVKAMIQLEITSSESNQKPVVISETDVWNWHNAAENNLKKLASC

Nucleotide sequence

Length: 1,935

>Harore.CG.MTP2014.S2.g08472.01.t
ATGGCTCACAGACTGCTAAGACAGTTGTTGGTGAGCCGCAACAGATTTCCTACTGGCATT
CTGAGAAAATTTTCACCTGTAACTGCTTCTCATCACGTGGGGTACATGAAACATAACATG
GTCCAATCCCAGGTGCCCCATCGATTTATTCATTTTTCTTCGAATTATAATAAGGCGACC
GGAATGAAACTCTACCCAATAACTTTGTTAGCCATTCTTCTCACGAGTGACAGGGAAGAT
AATAAACATTTGAAACTGAGGAATTCCCTCTTGCATTACGCACTAAATGGAGACGTATAT
TCATTGAAACAGGTCTTGAATAAAATAAAAGCTCTGAACTCAGACGAACAACACGAAATT
CTAAATTGCAGGCATCCATATGGCTGGACGCCTCTTATGTGTGCTGCGATTCGGGGCAAT
CTTGAGGCTATTCATGCCTTGATAAAAGCAGGTGCCGACCCAGATCTTGGTGACCATTAT
ACAACAGCTAGGAGAACTGCACGCAGCATGCGGGTGCACGAGCTTGACGTGCTAAGAGAA
AGAGACTTGTTTTCAGATCAACTCAATCCTTATTCTAATTTCAAAGGATTCACAGCATTG
CATTATGCGGTGATTCAAGACTCTTCAGCAGCTGTCAAAGCACTTCTTGATGGTGACGCG
AACCCTCTTGCCACAAACCATCTCGGACACAAAGCCAGTGAGTATGTGAGCGAAGAAAAT
GATGCACTGTACAATTTATTATTCAGATACGAAGAGGAACGTGCTGCAAAAAAGAAAGAA
GCAGAAATACGGGAAAGACTCCGGTATCCTTTGGAACAGAGAATTAAAGAACATATTATT
GGACAGGAAGGTCCTATAGCAACCGTGTCATCCTGCATACGGAGGAAGCAGAACGGATGG
TATGATGAACAACATCCTTTGGTTTTTTTCTTCTTAGGTTCCTCTGGCGTGGGGAAAACA
GAGTTAGCTAAACAAGTAGCCAATTATCTCCATCAGGGAGATAAAACAGCATTTATTCGT
TTGGACATGTCTGAATACCAAGAGAAACATGAAGTTGCCAAACTGATAGGTGCCCCTCCA
GGATACATAGGCCATGATCAAGGCGGTCAGCTGACAAAAAAGTTACAGGCAAAGCCGAAT
GCGGTCGTTTTGTTTGATGAAGTGGATAAGGCCCACCCTGATGTTCTAACGGTCCTATTA
CAATTGTTTGATGAAGGGCGATTGACTGACGGTCAGGGTCGTACTATCGAGTGCAAAGAT
GCTATTTTCGTCATGACTTCAAACCTCGCTTCTGACGAAATTGCCCAGTATGGTGCAAGA
TTGAGGCAAGAGGCTGCAGAAACAAAAAGGAACCGGCTAGAGGGCGACTCAAATGAGCAG
AACATCAGAACGGCTGACAAAGTTGACGTTTCTCACACTTTCAAGGAGAATGTAGTTCGA
CCAATTTTGAAGCGTCATTTCGGCCGTGACGAGTTTCTAGGCAGAATTAATGAATTTGTT
TACTTTTTGCCCTTTTCCGACGAAGAACTGATGAAGCTTGTTGAAAAGGAGCTGGTCATG
TGGAAGGAAATTGCTTTCAAAAAGCACAGCGTCCATTTAACTTGGCAAAAGCCTTTCGTT
TCTATAATATTAGCAGACGGATATAACATCCATTATGGAGCCAGGTCGATAAAGTATGAA
GTCGATAGGAGAGTAGTAAGCCTGCTTGCAAGCGCTCATGAAAGAGGGATGCTCAAGAAG
GGCTTCAAGGTTCATGTAAGTACGCCGGCAACGAATGAGGAGTTAAGCAATGCCAGTGAC
TTGGTCAAAGCCATGATTCAGCTGGAGATCACTTCATCAGAGTCAAATCAAAAGCCCGTC
GTAATAAGCGAAACCGATGTATGGAACTGGCATAATGCTGCTGAAAACAATCTAAAAAAA
TTAGCTTCATGTTAA

InterProScan

Gene3D
Ankyrin_rpt-contain_sf (IPR036770) - T[73-243] 2.9E-20
Pfam
Ankyrin_rpt-contain_dom (IPR020683) - T[83-156] 9.9E-7
SMART
Ankyrin_rpt (IPR002110) - T[85-114] 780.0 - T[127-156] 2.6E-6 - T[195-224] 0.015
SUPERFAMILY
Ankyrin_rpt-contain_sf (IPR036770) - T[88-239] 3.11E-17
CDD
Ankyrin_rpt-contain_dom (IPR020683) - T[122-239] 3.63373E-14
ProSiteProfiles
Ankyrin_rpt (IPR002110) - T[127-159] 12.022 - T[195-227] 9.671
ProSiteProfiles
Ankyrin_rpt-contain_dom (IPR020683) - T[127-227] 15.008
Pfam
Ankyrin_rpt (IPR002110) - T[196-226] 2.9E-4
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[270-449] 2.24E-47 - T[480-579] 2.24E-47
SMART
AAA+_ATPase (IPR003593) - T[305-451] 6.5E-9
Pfam
ATPase_AAA_core (IPR003959) - T[308-498] 1.5E-43
PRINTS
ClpA/B (IPR001270) - T[309-327] 6.9E-32 - T[355-373] 6.9E-32 - T[384-402] 6.9E-32 - T[417-431] 6.9E-32
Pfam
Clp_ATPase_C (IPR019489) - T[506-586] 2.4E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CLPB_HUMAN 53.996 % 548 0