- Transcript 'Cisavi.CG.ENS81.R54....' >
- Transcript 'Moocci.CG.ELv1_2.S57...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S2.g12051.01.t
Possible name(s)
ANK1; ANK2; TRPA1
Gene model
Location
S2 [632,540 / 647,073]
Amino acid sequence
Length: 1,280
>Harore.CG.MTP2014.S2.g12051.01.p
MVTMDDSPIEIKVISSSGQRKQCDREDYDSNEISEEAITSSTSFLKDGSLSKSPEGSNTK
RSRSSSMFQAVFSAMRISRKDSGKSLNGSVVGTPLSSRHGMSSSNERCKKSPATKRQMWA
ITRFTEKTNRSEGDPNSSAPASEICLISDGPNYIFKLADKGDDKQIATLCNVRPERLLSR
DLKGATILHHAAANGRTKVMDFVLADQQGHTLLDSQDDKNATPLHWAVAADNEIGVEYLL
SRGANPTIANNNGECPIHACVQMESVKAMKTLIKHKGIVNLSEKQTTCGKTALHIAAIVD
NEEITRLLLESGAKPCIGCNLGYRPLHYAALNGSLRVMEVILERCQSSGYTREQILSFSD
KEFCSALHCAVTGGNIDTIKMCLSYGARLDKQQADLSTPMHVVCSQGAFDIVKQMFELAK
EQAIKTMSIQDKQKHTPLHKAAMYGHAVIIRYLVEQGANMDILDGDQNSPLLLAASRGNW
DCVHHLIELGSSLLLKNSDDRNLMHMIVLKGGDIRELENKYGDQPLSFLSDKCKSILSSV
HVSHLLNDADSFGCTPLHYACQEGNLASLDTLMKLGVSAKPKSAGSQSPLHFATMYGRYN
ACKRLINSPQGPNIINEKDSSGMTPLHFAAQNGHIKVVRLLLNKGAVFHRTSSGRSVLHV
AAESGYTRTIRILIEMNKTLLDQTDEEGDTALHIACRSHQVNTACLLLDLNASILRNKQG
TTCFSEAIRNGNREVALAIVEHNRWEEAMQTCCRNENYPSVPTMLLIQYLPDIWVVAMNR
CIKTADTNPKSKDFWIKYQFKYLQPNVNNRDEVKRTMKALINADSKSKAQSNVVVALPAL
NRMVQFNRVDCLRHPVSVAYLRMKWNAYGRWVHGLNLFIYILGLFPLTYLICTMDSNPHD
DSNLNSNSTTIQHERLQYTAFQFTMMILLTILSTCQMIKEVIQMIQQKKQYFLDFTNAVE
WILYLDSVLFVVPFFTGYSVHWQYECGAIAILLAWFNLLLFLRRFDLAGIYVVMFLEIFK
TLIKVILVFSFILVAFSLSFFVLMRHENDKAFQNPGLAFMRIFTMTLGEMGYTESFLEPY
VDDDPDTLHFPVTSMILLIVFILVMPILLMNLLIGLAVGDIAEVQNNASLQRLAMQVQLH
TDIEGKLSTRILRHVDKEELIVYPNGSRSHYNKFWNFVEQSSVIENCSETVTKADRNINY
LNLEIQKQKHRIKGIQASLTKQHDLLRLIVQKMEIRSEADDQDEGLDSEIQRRLQSNRTR
IASNVGSKIMAVRAFKSVLQ
Nucleotide sequence
Length: 4,261
>Harore.CG.MTP2014.S2.g12051.01.t
AGCGGTCTCGTATCATAGCACTTGATCGATGGTTACGATGGACGACAGCCCTATAGAAAT
TAAAGTGATTAGCAGCAGCGGACAAAGGAAACAATGTGATCGGGAAGATTATGACAGTAA
CGAGATCAGTGAAGAAGCCATAACGTCGAGCACGAGTTTTCTGAAAGACGGAAGCCTCTC
GAAATCTCCAGAAGGATCTAACACAAAAAGAAGCAGGAGTTCTAGTATGTTCCAGGCTGT
CTTCAGTGCGATGCGCATTAGTAGGAAGGACAGCGGTAAATCACTGAACGGCAGCGTCGT
TGGAACTCCTCTGAGCAGTAGACATGGAATGTCATCCTCGAATGAACGTTGTAAAAAGAG
CCCTGCTACCAAACGACAAATGTGGGCGATAACTCGGTTCACTGAAAAAACGAACAGGAG
TGAAGGAGATCCTAATTCTTCAGCACCCGCCAGTGAAATCTGCCTAATTTCTGATGGACC
AAATTACATATTTAAGTTGGCTGACAAGGGAGATGATAAGCAGATAGCAACATTATGCAA
TGTGCGTCCAGAGAGATTGTTATCGAGAGACTTGAAAGGTGCCACCATTTTACATCACGC
AGCGGCAAATGGACGCACGAAAGTGATGGACTTTGTACTTGCTGATCAGCAAGGTCATAC
ACTGCTAGATAGCCAAGATGACAAAAACGCCACACCGTTACACTGGGCGGTTGCTGCAGA
TAATGAAATTGGTGTCGAATATCTTCTGTCAAGAGGAGCGAACCCCACGATAGCAAACAA
CAATGGAGAATGTCCTATACATGCATGCGTCCAAATGGAATCGGTTAAAGCTATGAAAAC
GTTGATTAAACACAAGGGAATTGTCAATCTGAGCGAGAAACAGACTACATGTGGCAAAAC
AGCTTTACATATAGCAGCCATTGTTGACAATGAAGAAATAACGAGACTTTTGTTGGAATC
TGGTGCTAAACCATGTATTGGCTGTAATTTGGGATATAGGCCTCTACATTACGCCGCGCT
GAACGGTTCATTGAGAGTGATGGAGGTAATTCTGGAAAGATGTCAGTCGAGCGGTTACAC
TCGTGAGCAGATCCTCTCCTTCAGCGACAAAGAGTTTTGCAGTGCGCTTCACTGCGCCGT
TACCGGAGGAAATATAGACACGATAAAAATGTGTTTAAGTTACGGAGCACGACTAGACAA
ACAACAAGCCGATCTTTCGACTCCAATGCATGTCGTTTGTTCTCAAGGAGCATTCGATAT
TGTGAAGCAAATGTTTGAGCTTGCTAAGGAACAGGCCATTAAAACGATGTCAATACAAGA
CAAACAAAAACACACACCTTTGCACAAAGCTGCAATGTATGGGCATGCTGTAATAATTCG
TTATCTGGTCGAGCAAGGAGCAAACATGGATATATTAGATGGAGATCAGAATTCGCCATT
GCTGTTAGCAGCGTCACGCGGAAACTGGGATTGTGTTCATCACCTGATAGAACTCGGATC
AAGTTTGTTATTGAAGAACAGCGATGACAGAAATCTAATGCATATGATTGTGCTGAAAGG
AGGAGACATAAGGGAACTGGAGAACAAATATGGTGATCAGCCTCTTTCATTTCTTTCTGA
TAAATGCAAATCAATACTTTCTTCAGTCCATGTATCGCATCTTCTCAACGATGCTGATTC
TTTTGGCTGTACTCCTCTCCATTACGCTTGTCAAGAAGGAAATCTTGCTAGCCTCGATAC
TCTTATGAAACTGGGAGTAAGCGCCAAACCAAAGTCAGCCGGTAGCCAGTCGCCTCTTCA
CTTTGCCACGATGTATGGCAGATACAATGCATGCAAGAGATTGATAAACAGTCCGCAAGG
ACCGAATATTATCAATGAAAAGGACTCCAGCGGCATGACCCCGTTGCATTTCGCGGCGCA
AAACGGACATATAAAAGTAGTGAGACTCCTTCTTAACAAAGGTGCCGTGTTCCATCGCAC
GAGTTCCGGGCGATCCGTTCTTCACGTTGCAGCGGAAAGTGGCTATACCAGAACAATTCG
AATTCTCATTGAGATGAATAAGACATTACTGGACCAAACTGATGAAGAAGGGGATACTGC
TCTGCATATTGCTTGTCGGTCCCACCAAGTGAACACTGCTTGCCTCCTGCTTGACCTCAA
CGCTTCCATACTGCGTAATAAGCAAGGAACCACCTGTTTCTCTGAAGCTATACGAAATGG
AAACAGGGAAGTTGCTTTGGCAATTGTTGAGCATAATCGCTGGGAAGAAGCAATGCAGAC
ATGCTGCAGAAATGAAAATTACCCGTCTGTTCCAACTATGCTACTTATTCAGTACTTACC
AGATATTTGGGTGGTTGCAATGAACCGCTGCATTAAAACCGCAGATACCAACCCGAAAAG
CAAAGATTTTTGGATTAAGTATCAATTCAAGTACTTACAACCAAATGTGAATAACAGAGA
TGAGGTAAAAAGAACAATGAAAGCCCTCATCAATGCTGATTCGAAATCAAAAGCTCAAAG
TAACGTAGTTGTTGCGCTTCCCGCCTTAAATAGAATGGTTCAGTTCAACAGAGTAGATTG
CTTACGTCACCCAGTGTCAGTGGCCTATCTTCGTATGAAGTGGAATGCTTACGGCAGATG
GGTGCACGGCTTAAATCTTTTCATCTACATACTTGGACTTTTTCCTTTGACCTATCTCAT
TTGCACAATGGATTCTAACCCACATGATGATTCCAATTTGAACTCAAATTCTACAACGAT
ACAGCACGAACGATTACAGTACACAGCATTCCAATTTACAATGATGATACTTTTGACGAT
ACTCTCAACATGTCAAATGATAAAGGAAGTAATACAAATGATACAGCAGAAAAAGCAATA
TTTCTTGGATTTTACGAATGCTGTGGAATGGATCTTATATTTAGACAGTGTACTCTTCGT
TGTCCCCTTCTTCACTGGCTATTCCGTTCACTGGCAGTACGAATGCGGTGCAATAGCAAT
TTTGCTTGCTTGGTTCAATTTATTGTTGTTTTTGCGAAGATTTGATTTAGCAGGAATCTA
CGTGGTGATGTTCCTGGAAATCTTCAAAACCCTGATAAAAGTTATTCTCGTGTTTTCCTT
CATACTTGTTGCATTTTCCCTGTCGTTTTTTGTTCTAATGAGACACGAGAATGACAAGGC
TTTCCAAAACCCTGGTCTGGCATTTATGCGCATCTTCACTATGACTCTCGGTGAGATGGG
GTATACGGAAAGTTTTCTTGAACCCTACGTGGATGACGATCCGGATACATTACATTTCCC
TGTTACATCGATGATCTTGCTGATCGTGTTTATACTTGTGATGCCGATTCTCCTAATGAA
CTTACTAATTGGTTTAGCAGTTGGTGACATCGCAGAAGTTCAAAATAATGCTTCACTTCA
AAGACTAGCCATGCAGGTTCAACTTCATACTGACATTGAAGGCAAGCTTTCTACACGTAT
ACTCAGACATGTCGACAAAGAGGAATTAATTGTCTATCCAAATGGATCTCGGAGTCATTA
TAACAAGTTCTGGAATTTTGTTGAGCAGAGTTCAGTCATAGAGAATTGTTCTGAGACAGT
AACAAAGGCGGATCGAAATATTAATTACTTGAATTTGGAAATTCAGAAACAGAAGCATAG
AATTAAAGGCATCCAGGCGTCTTTGACAAAGCAACACGACCTCTTGCGCTTGATCGTGCA
GAAAATGGAAATCCGATCGGAGGCAGATGACCAAGATGAAGGTTTAGACTCAGAAATACA
AAGACGTCTTCAGAGTAATCGTACTCGAATAGCAAGTAATGTTGGAAGCAAAATCATGGC
TGTGCGAGCGTTTAAGTCGGTTCTGCAGTAAACACAGATGGGTTCATGACATCACAAGTG
TTACATCTTGTATCACATCATTCAGTAATGGAAATCGAATCGATATTTAGGTTATAACAT
GGGGGGGGGGGAGTGGCGATTTCTATTTTTTTTTGTGAGTTCAACTACTTTCTGAAAGTT
ACAGAGAGATTGTGAAGTGTCAGAGATTAAGGTGTCGCAACGTCTTTGCTTTCTTTAAAG
CCTTTACTCGACTACGGTACCATGTAAAATATACTTTTTTATTTTGAATCTTCACTATTG
TACTGTTTTGTGATTGCCTTGTTCTGTGTGGCTTATTAGCTGTTAGATTTTCCTTTTTAC
ATAATAAAATTGCTGTGTTGTGATACATATAAAATTGAATGGAGCTTGACTCTTATACGG
A
| Gene3D |
Ankyrin_rpt-contain_sf (IPR036770) - T[134-282] 1.6E-21 - T[283-413] 1.2E-28 - T[418-612] 1.1E-34 - T[613-820] 1.1E-34 |
| PANTHER |
TRPA1/painless (IPR030288) - T[149-1253] 0.0 |
| Pfam |
Ankyrin_rpt-contain_dom (IPR020683) - T[175-249] 8.7E-10 - T[251-316] 4.5E-9 - T[367-462] 3.8E-11 - T[542-609] 1.2E-8 - T[618-676] 1.2E-12 |
| SUPERFAMILY |
Ankyrin_rpt-contain_sf (IPR036770) - T[181-390] 8.14E-41 - T[365-742] 4.32E-60 |
| ProSiteProfiles |
Ankyrin_rpt-contain_dom (IPR020683) - T[183-719] 91.153 |
| SMART |
Ankyrin_rpt (IPR002110) - T[183-212] 190.0 - T[219-248] 7.8E-4 - T[252-281] 170.0 - T[288-317] 5.8E-4 - T[321-350] 7.7 - T[362-391] 0.0089 - T[395-424] 51.0 - T[433-462] 1.0E-5 - T[466-495] 0.04 - T[552-583] 0.057 - T[585-614] 13.0 - T[621-650] 1.2E-6 - T[653-682] 0.37 - T[687-716] 0.0088 - T[719-748] 180.0 |
| CDD |
Ankyrin_rpt-contain_dom (IPR020683) - T[214-342] 2.25273E-29 - T[289-413] 5.65386E-26 - T[360-487] 7.41829E-26 - T[547-674] 1.09251E-30 - T[616-740] 5.07748E-31 |
| ProSiteProfiles |
Ankyrin_rpt (IPR002110) - T[219-251] 10.953 - T[288-313] 10.633 - T[321-344] 8.736 - T[433-465] 13.357 - T[466-498] 9.404 - T[552-584] 9.965 - T[621-653] 14.212 - T[653-685] 8.923 - T[687-719] 8.95 |
| Pfam |
Ion_trans_dom (IPR005821) - T[899-1127] 2.1E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TRPA1_HUMAN | 38.832 % | 738 | 0 |
| ANK2_HUMAN | 27.817 % | 172 | 7.31E-43 |
| ANK1_HUMAN | 28.142 % | 174 | 1.13E-43 |