- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S302.g02048.01.t
Possible name(s)
FUCA1; FUCA2
Gene model
Location
S302 [80,990 / 83,721]
Amino acid sequence
Length: 458
>Harore.CG.MTP2014.S302.g02048.01.p
MLYITLFLMLCLGGSEVVDGRYSPTWTSLETRPLPKWFDEAKLGIFIHWGVFSVPSFAAD
SGGVAWFWWYWKGLNQTEQVDFMKRNYPPNFQYADFAAQFTAEFYDPYQWADIFNASGAK
YVVLTSKHHDGFTNWPSANSWNWNSMSVGPHRDLVGDLATAIRKSTTMRFGLYHSLFEFF
NPLYLADKASSFKTNDFVRAKTMPELYDIVNRYKPEIIWSDGQWEADCTYWNSTNFIAWL
YNDSPVKETVVTNDRWGKETPCKHGGYFSCNDRYNPGVAQPRKWENAMTIEKDSWGFRRN
AKLSDFMTIEELLQTFVTTISCGGNLLMNVGPTKEGTIAPIYEERLRQMGKWLSVVGEAV
YSSKPWTHQNDSVTKGVWYTANNGFVYAFVFEWPSTGYLYLASPTPLSDASSVSLVGSNA
VLSWNLKKMTGIVVDFTSLLPSQLKNKWLWVLRLQGFA
Nucleotide sequence
Length: 1,377
>Harore.CG.MTP2014.S302.g02048.01.t
ATGCTGTACATTACTCTATTTCTCATGCTCTGTCTCGGTGGCAGTGAAGTTGTTGATGGA
AGATACAGCCCTACCTGGACATCATTGGAAACAAGACCTCTTCCTAAATGGTTTGACGAA
GCTAAGCTTGGAATTTTTATCCACTGGGGAGTTTTCTCAGTACCGAGCTTTGCTGCGGAC
AGTGGTGGAGTTGCATGGTTTTGGTGGTATTGGAAAGGACTAAACCAAACGGAACAAGTC
GATTTCATGAAGCGTAACTATCCTCCTAATTTTCAGTATGCCGACTTCGCTGCTCAATTC
ACTGCAGAGTTTTACGATCCTTACCAATGGGCAGATATTTTTAATGCATCCGGTGCAAAA
TACGTTGTGTTGACAAGCAAACATCATGACGGATTCACTAACTGGCCTTCCGCAAACTCA
TGGAATTGGAATTCCATGTCTGTCGGTCCTCATCGGGATCTTGTTGGAGATCTTGCGACA
GCCATAAGAAAGAGTACAACCATGCGATTTGGCCTCTATCATTCATTATTCGAGTTTTTC
AACCCACTCTATCTGGCTGATAAAGCATCATCTTTCAAAACTAATGATTTTGTAAGGGCC
AAGACCATGCCTGAGTTATATGACATTGTGAACAGATATAAGCCTGAAATTATATGGTCA
GATGGACAATGGGAAGCAGATTGTACATACTGGAACAGTACAAATTTCATTGCTTGGCTT
TATAATGACAGTCCTGTAAAAGAGACTGTGGTTACAAACGACAGGTGGGGGAAAGAGACA
CCTTGCAAACATGGTGGATATTTCTCATGCAATGATAGGTATAATCCGGGTGTTGCGCAG
CCCAGAAAATGGGAAAACGCTATGACCATTGAAAAAGATTCATGGGGATTCAGGCGCAAT
GCCAAACTCTCTGATTTTATGACAATAGAAGAGCTTCTTCAAACATTTGTGACTACTATT
AGCTGTGGTGGAAACCTGTTGATGAATGTCGGTCCAACCAAAGAAGGAACGATAGCACCG
ATCTATGAGGAACGCCTGCGACAGATGGGTAAATGGCTCAGTGTTGTTGGTGAAGCGGTT
TACAGTAGCAAGCCATGGACACACCAAAATGATTCTGTCACAAAGGGAGTGTGGTATACA
GCCAACAACGGTTTTGTATATGCGTTTGTGTTTGAATGGCCCTCTACTGGCTATCTATAT
CTAGCGTCCCCTACACCTCTGTCTGATGCTTCGTCAGTGTCTCTAGTTGGATCGAATGCT
GTGTTGTCATGGAATCTGAAGAAAATGACAGGAATTGTAGTTGATTTTACCTCTTTATTG
CCGAGCCAATTAAAGAACAAGTGGCTTTGGGTTTTGAGATTGCAAGGATTTGCATAG
| PIRSF |
FUC_metazoa-typ (IPR016286) - T[3-438] 4.9E-123 |
| PANTHER |
Glyco_hydro_29 (IPR000933) - T[5-456] 4.3E-204 |
| Pfam |
Glyco_hydro_29 (IPR000933) - T[18-358] 1.9E-115 |
| SMART |
Glyco_hydro_29 (IPR000933) - T[21-404] 1.6E-218 |
| SUPERFAMILY |
Glycoside_hydrolase_SF (IPR017853) - T[21-361] 3.58E-109 |
| PRINTS |
FUC_metazoa-typ (IPR016286) - T[82-97] 8.7E-66 - T[121-137] 8.7E-66 - T[140-158] 8.7E-66 - T[208-224] 8.7E-66 - T[236-257] 8.7E-66 - T[311-332] 8.7E-66 - T[344-366] 8.7E-66 |
| Gene3D |
Glyco_hydro_b (IPR013780) - T[362-434] 1.7E-106 |
| Pfam |
Fucosidase_C (IPR031919) - T[369-455] 5.8E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUCO2_HUMAN | 56.881 % | 527 | 0 |
| FUCO_HUMAN | 55.046 % | 515 | 0 |