- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Cisavi.CG.ENS81.R19....' >
- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S302.g13804.01.t
Possible name(s)
FUCA1; FUCA2
Gene model
Location
S302 [89,543 / 91,449]
Amino acid sequence
Length: 460
>Harore.CG.MTP2014.S302.g13804.01.p
MYTLLVFSFLLCGSHGIDGRYSATWESLDERPLPKWYDEAKLGIFIHWGVFSVPSFGDTS
TSSAAEWFWWYWQAVNNPHHVDFMKSNYPPDFQYADFAPQFTAEFFNPYEWAEIFNASGA
KYVVFTSKHHDGYTNWPSADSWNWNSVDVGPKRDIVGDLAKAIRNSTKMRFGLYHSLFEW
FNPLFELDRENFFKTNYFVSQKTMPELFDIVNKYKPDVIWSDGQWEAGYEYWNSTNFIAW
LYNDSPVKDTVVTNDRWGMLTPCQHGGFYTCSDRYNPGVLQPKKWENAMTIDVISWGFRR
NAKLSDYLGIEEIIKTFVTTISCGGNMLINVGPTKEGTIKPIYEERLRQLGSWLSVVGEA
VYASKPWTHQNDSITKGVWYTAKGNETVYAFFFDWPTNGKLTLGSPIPFCNTAAVSLLGV
RGALAWTQRYQTGIVVDFSGISPDRTNNKWVWVLKLQAFR
Nucleotide sequence
Length: 1,383
>Harore.CG.MTP2014.S302.g13804.01.t
ATGTATACATTGCTAGTCTTTTCGTTCCTTTTGTGTGGCAGTCATGGTATTGATGGCAGG
TACAGTGCCACTTGGGAGTCATTGGATGAAAGACCATTGCCTAAATGGTATGATGAAGCC
AAACTGGGTATTTTCATTCACTGGGGTGTTTTCTCAGTCCCCAGCTTCGGCGACACGAGT
ACTTCAAGCGCAGCCGAGTGGTTCTGGTGGTATTGGCAAGCAGTGAACAACCCCCATCAT
GTAGATTTCATGAAGAGCAATTATCCGCCTGATTTTCAGTATGCTGATTTTGCTCCTCAA
TTCACAGCAGAATTTTTCAACCCTTACGAATGGGCTGAAATTTTTAATGCTTCAGGTGCC
AAGTATGTCGTGTTTACAAGTAAGCACCATGATGGATATACAAATTGGCCTTCTGCTGAT
TCATGGAACTGGAATTCAGTAGATGTTGGTCCGAAACGGGATATCGTTGGGGATCTTGCA
AAAGCCATAAGGAATAGCACTAAGATGCGATTTGGCCTCTATCACTCGCTGTTTGAGTGG
TTCAACCCCCTTTTTGAATTGGATAGAGAAAACTTTTTCAAAACCAACTACTTTGTGAGT
CAGAAAACTATGCCAGAGCTATTCGACATTGTGAACAAATATAAACCTGATGTAATTTGG
TCAGATGGTCAATGGGAAGCAGGTTATGAATACTGGAACAGCACAAACTTCATTGCGTGG
CTATACAATGATAGTCCTGTAAAGGACACCGTGGTTACAAACGACAGGTGGGGAATGCTA
ACACCCTGTCAGCATGGAGGATTTTATACTTGCAGTGATAGGTACAACCCTGGTGTCTTG
CAGCCGAAAAAATGGGAAAACGCGATGACCATAGATGTTATTTCTTGGGGTTTCAGGCGA
AACGCAAAACTATCTGATTATCTCGGGATAGAAGAAATAATCAAGACTTTTGTCACTACT
ATCAGTTGTGGTGGAAACATGTTAATAAATGTTGGTCCAACAAAAGAGGGAACAATAAAA
CCGATATATGAGGAACGATTGCGGCAGTTGGGAAGTTGGCTCAGTGTTGTTGGAGAAGCA
GTATATGCTAGCAAGCCATGGACCCATCAGAATGATTCTATAACAAAGGGAGTGTGGTAT
ACAGCGAAGGGAAATGAGACTGTGTATGCATTCTTCTTCGATTGGCCAACTAATGGCAAG
TTAACTTTAGGATCTCCCATCCCGTTTTGTAACACTGCCGCTGTTTCCTTGCTCGGCGTC
AGGGGTGCATTGGCATGGACTCAGAGATACCAAACCGGAATAGTAGTTGATTTTAGTGGC
ATTTCACCAGACCGCACAAACAATAAATGGGTTTGGGTTTTGAAATTGCAAGCATTCAGA
TAG
| PIRSF |
FUC_metazoa-typ (IPR016286) - T[3-432] 6.0E-122 |
| PANTHER |
Glyco_hydro_29 (IPR000933) - T[13-457] 2.7E-208 |
| Pfam |
Glyco_hydro_29 (IPR000933) - T[18-359] 1.0E-115 |
| SUPERFAMILY |
Glycoside_hydrolase_SF (IPR017853) - T[20-362] 1.47E-108 |
| SMART |
Glyco_hydro_29 (IPR000933) - T[20-406] 1.1E-224 |
| PRINTS |
FUC_metazoa-typ (IPR016286) - T[83-98] 9.7E-66 - T[122-138] 9.7E-66 - T[141-159] 9.7E-66 - T[209-225] 9.7E-66 - T[237-258] 9.7E-66 - T[312-333] 9.7E-66 - T[345-367] 9.7E-66 |
| Gene3D |
Glyco_hydro_b (IPR013780) - T[363-458] 1.3E-6 |
| Pfam |
Fucosidase_C (IPR031919) - T[370-457] 1.4E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUCO2_HUMAN | 58.904 % | 541 | 0 |
| FUCO_HUMAN | 55.782 % | 523 | 0 |