- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S307.g05017.02.t
Possible name(s)
BRD2
Gene model
Location
S307 [70,350 / 74,392]
Amino acid sequence
Length: 905
>Harore.CG.MTP2014.S307.g05017.02.p
MSSEVTQSSDPIAAMPVNNLVNSEQPQRRGGVRFTNQLEYLKKNVMKFVWKHHFSWPFRS
PVDPVKLNLPDYFEIIKTPMDLSIIKRKLDSNQYSSAKECIQDYNLMFSNCYIYNKPTDD
VVLMAQTLEKNFLQKIKEMPPLEHEIDLPAPGKKGRKGRIVSTGSTVTRKQALETLPTST
QSINEAQPVTSTNNAIHPAFKQEQQTSITQHTNIKMEADFSQQNSSVTAQIMASSVVHQA
PPMPSKPKKGVKRKADTTTPVITTVAGKLPEPMSPEQRPESPDNNIEHVLSPMSNNVSGD
MNDLNVSGEMVGGKVLIRTPSVRREGSGRTIRPPRSRDLDSEENDQHAKRPKVAKLGEQM
KYCNNIIKDFFSKKHAAYAWPFYKPVDADSLGLHDYFEIIKRPMDLGTVKRKMDNRDYMS
SSEFATDMRTIATNCFKYNPPDHDVVAMAKRLLEEFEISFNRYAKMPDELIEADQTSMQM
SDPDSVIVVSKESKTKSDKSRKEKHHKHRSRQRSASTSSDSDSSSSETSDTTELERSKKI
AQVQEKIKQAQVDLSKLMEQQAALLAEAAKIKTKKEIKEKKKRKKKEKAGKQKYQSQEKE
AAGKSKSKSKIDKEDKTGNTTNSKSTKPKKQTKKPQKKKNVNGVSAGAAGTGVSNSDIYD
YESEREDLAKPMTYDEKRQLSLDINKLPGDKLGRVVHIIQTREPSLKDSNPDEIEIDFET
LKPSTLRELEKYVMTCLRKKPRKPYSKKAPSTKEEFTRQKQEELEKRLEDVSGKLGMPKK
LKKSKSPATSSTTGGASRLSASSSDSSDSDSSSGSSSSDTSDSESDQAFIQPRVTPISTG
VYRGDVFMTIVDTSSDSDMVHSPECLVEVTHDVNPLQYCNRSVLYHVLSFLYCHVNFSQR
TTATI
Nucleotide sequence
Length: 2,718
>Harore.CG.MTP2014.S307.g05017.02.t
ATGTCGTCCGAAGTGACGCAAAGCAGCGATCCAATCGCCGCGATGCCGGTCAACAACCTG
GTTAATTCGGAACAACCTCAGAGAAGAGGAGGAGTCCGCTTTACGAACCAGCTCGAATAT
TTGAAAAAGAATGTTATGAAGTTCGTGTGGAAGCATCATTTCTCATGGCCGTTCCGTAGT
CCCGTCGATCCTGTCAAACTGAATCTTCCCGATTACTTTGAGATAATCAAAACGCCAATG
GACTTGAGTATCATTAAAAGAAAACTAGATTCGAACCAATATTCGTCAGCTAAGGAATGT
ATACAAGATTATAATCTTATGTTTTCAAACTGCTACATATACAATAAGCCTACAGATGAT
GTGGTATTGATGGCCCAGACCCTGGAAAAGAACTTTTTACAAAAAATCAAAGAGATGCCT
CCCCTAGAACATGAGATTGATCTTCCAGCTCCTGGGAAAAAGGGAAGAAAAGGCCGAATC
GTTTCGACTGGATCAACGGTAACTCGAAAACAGGCTCTAGAAACTTTGCCCACCAGTACG
CAGTCCATAAATGAAGCTCAACCAGTCACTTCAACTAATAACGCTATCCATCCAGCATTT
AAACAAGAGCAACAAACTTCTATTACACAACACACAAATATTAAAATGGAGGCGGACTTT
TCACAGCAAAATTCCAGTGTTACTGCTCAGATAATGGCTTCGTCGGTGGTTCACCAAGCA
CCGCCGATGCCGTCGAAACCGAAAAAAGGGGTTAAGCGAAAAGCGGACACTACCACCCCT
GTCATCACCACTGTAGCGGGAAAACTTCCCGAACCGATGTCCCCGGAACAGAGACCAGAA
TCTCCGGATAACAACATAGAACATGTATTGTCTCCTATGAGCAATAACGTATCGGGGGAC
ATGAACGACCTCAATGTATCTGGCGAGATGGTGGGCGGTAAAGTCTTAATCCGTACCCCC
TCTGTTCGCCGCGAGGGGTCCGGTCGAACGATACGACCGCCGCGATCACGGGATCTAGAT
TCTGAAGAGAATGACCAGCATGCCAAACGACCCAAAGTGGCTAAACTAGGTGAACAAATG
AAATACTGCAACAACATTATAAAGGATTTCTTTTCTAAAAAACATGCTGCATACGCATGG
CCCTTTTATAAGCCGGTCGATGCGGATTCATTGGGTCTGCACGACTACTTTGAGATTATT
AAAAGGCCTATGGACCTGGGCACCGTAAAAAGGAAAATGGACAACAGAGACTACATGTCT
TCGTCCGAATTCGCTACTGACATGCGGACTATCGCGACCAATTGTTTCAAATATAATCCA
CCGGATCACGACGTAGTCGCGATGGCAAAACGTCTTCTCGAAGAGTTTGAAATTAGTTTT
AATAGGTATGCTAAGATGCCTGATGAGCTTATAGAGGCAGATCAGACATCGATGCAGATG
TCCGATCCTGATTCCGTTATAGTAGTTTCAAAAGAAAGCAAGACAAAGTCTGACAAGTCG
AGGAAAGAAAAACATCACAAGCATAGAAGTCGCCAACGTTCGGCAAGTACCTCCAGCGAC
TCTGATTCTTCATCGAGCGAGACGTCCGACACGACGGAACTCGAACGTAGCAAAAAAATC
GCCCAAGTACAAGAAAAGATAAAGCAAGCCCAAGTCGATCTGTCGAAGCTCATGGAACAA
CAGGCTGCCCTGCTGGCAGAGGCAGCAAAAATTAAAACGAAGAAGGAAATAAAAGAGAAA
AAAAAGAGGAAGAAGAAAGAAAAGGCCGGAAAGCAAAAATACCAAAGTCAAGAAAAAGAA
GCTGCTGGGAAATCGAAATCAAAATCAAAAATTGATAAAGAAGACAAAACCGGAAATACA
ACTAATTCAAAATCTACAAAGCCTAAAAAACAAACTAAAAAACCTCAAAAAAAGAAAAAT
GTCAATGGTGTCAGTGCCGGCGCGGCCGGTACAGGAGTTTCAAATTCGGATATTTACGAC
TATGAAAGCGAAAGGGAAGATCTAGCAAAACCGATGACGTATGATGAAAAACGGCAGCTA
TCTCTCGACATCAATAAACTTCCTGGAGATAAACTCGGCCGAGTAGTGCATATCATACAG
ACTCGAGAACCGTCTTTAAAAGACTCCAACCCTGACGAGATAGAAATTGATTTCGAGACG
CTGAAGCCGTCGACATTACGAGAACTCGAGAAATACGTCATGACCTGTCTTCGAAAAAAG
CCAAGAAAACCATACTCCAAGAAAGCCCCTTCTACAAAAGAGGAATTCACTCGTCAAAAG
CAAGAAGAATTGGAGAAGAGGTTGGAAGATGTCAGTGGCAAATTAGGAATGCCTAAGAAG
TTGAAAAAGAGTAAATCGCCTGCAACATCCTCCACTACGGGCGGTGCGAGCAGACTATCC
GCGAGCTCCAGCGATTCATCCGACTCCGATTCCTCTTCGGGCTCCAGTTCGTCAGACACT
TCCGATTCTGAGTCAGATCAAGCGTTCATACAACCCCGTGTAACTCCCATATCAACCGGA
GTTTACAGAGGAGACGTATTCATGACCATAGTCGATACAAGTTCTGATAGTGACATGGTG
CATTCCCCTGAATGTTTGGTGGAAGTAACACATGATGTTAACCCTCTTCAATATTGTAAC
CGTTCTGTACTGTACCATGTCCTTTCTTTTCTCTACTGCCATGTAAATTTCAGTCAACGT
ACGACTGCGACGATATAG
| Gene3D |
Bromodomain-like_sf (IPR036427) - T[17-158] 1.5E-42 - T[352-469] 2.3E-38 |
| SUPERFAMILY |
Bromodomain-like_sf (IPR036427) - T[26-147] 3.27E-39 - T[349-470] 4.71E-35 |
| SMART |
Bromodomain (IPR001487) - T[31-141] 7.2E-38 - T[356-465] 4.6E-33 |
| Pfam |
Bromodomain (IPR001487) - T[43-125] 4.5E-19 - T[363-450] 2.5E-17 |
| ProSiteProfiles |
Bromodomain (IPR001487) - T[50-122] 21.703 - T[374-446] 20.268 |
| PRINTS |
Bromodomain (IPR001487) - T[53-66] 5.1E-23 - T[69-85] 5.1E-23 - T[85-103] 5.1E-23 - T[103-122] 5.1E-23 |
| ProSitePatterns |
Bromodomain_CS (IPR018359) - T[55-114] . - T[379-438] . |
| ProSiteProfiles |
NET_dom (IPR027353) - T[662-744] 24.238 |
| Gene3D |
NET_sf (IPR038336) - T[664-745] 1.4E-37 |
| Pfam |
NET_dom (IPR027353) - T[671-734] 3.3E-29 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BRD3_HUMAN | 58.784 % | 193 | 9.23E-52 |
| BRDT_HUMAN | 39.034 % | 464 | 4.44E-149 |
| BRD2_HUMAN | 46.552 % | 378 | 4.41E-118 |