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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S307.g05272.01.t

Possible name(s)

RPL35

Gene model

Harore.CG.MTP2014.S307.g05272

Location

S307 [93,122 / 94,842]

Sequences

Amino acid sequence

Length: 167

>Harore.CG.MTP2014.S307.g05272.01.p
MFLFQAKIKARELHGKSKEELQKQLHDFQQELATLRVAKVTGGQASKLSKIRLVRKSVAR
VLTVINQTQKENLRKLFKGKKYKPKDLRPKKTRALRRRLNKHEESLKSAKEMRKLRLYPL
RKYALKIYLKFHFNNHQAIVISDKQITKHSIKNNSSHRQGNCITRIF

Nucleotide sequence

Length: 504

>Harore.CG.MTP2014.S307.g05272.01.t
ATGTTTTTGTTCCAGGCAAAAATAAAGGCACGTGAACTTCATGGAAAGTCGAAGGAAGAA
TTGCAAAAGCAACTTCATGACTTCCAGCAAGAACTTGCGACGTTGCGCGTCGCCAAAGTA
ACCGGAGGACAAGCTTCGAAACTGTCTAAAATCCGACTTGTCAGAAAAAGCGTTGCCAGA
GTCCTTACTGTTATCAACCAGACGCAGAAAGAGAACCTGCGTAAACTGTTCAAGGGCAAG
AAATACAAGCCTAAAGACTTGAGGCCGAAAAAGACCCGTGCTTTGAGAAGACGTTTGAAT
AAGCACGAAGAAAGCCTAAAATCGGCGAAGGAGATGAGAAAACTGCGACTATATCCTCTG
AGAAAATATGCCCTGAAAATATATCTCAAGTTTCATTTCAATAATCATCAAGCAATCGTA
ATCTCTGACAAACAAATCACCAAGCATTCAATCAAAAACAATTCTTCACATCGGCAAGGC
AACTGCATAACTAGAATATTTTGA

InterProScan

Hamap
Ribosomal_L29/L35 (IPR001854) - T[8-68] 13.093
SUPERFAMILY
Ribosomal_L29/L35_sf (IPR036049) - T[8-68] 9.94E-18
Pfam
Ribosomal_L29/L35 (IPR001854) - T[12-67] 4.0E-19
TIGRFAM
Ribosomal_L29/L35 (IPR001854) - T[12-67] 7.2E-18
ProSitePatterns
Ribosomal_L29_CS (IPR018254) - T[47-61] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL35_HUMAN 80.165 % 188 1.68E-62