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  1. Transcript 'Phfumi.CG.MTP2014.S3...'
  2. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S30.g12564.01.t

Possible name(s)

MECOM; ZNF598; ZNF711

Location

S30 [267,733 / 272,986]

Sequences

Amino acid sequence

Length: 884

>Harore.CG.MTP2014.S30.g12564.01.p
MEANKNTEKKPIKSKGQYKKSKGGQQLRQFTPRKRVSECEDDGTCDLCALPIEIYAIGPC
DHPICYRCSAKMRILCEQTHCAVCRVEMKKIIYSKVKMRFQIASELKSAKPDKSNNWFTD
EEVKKKYKKLFQHICGLCPDRDPEFAFDLLQAHVRKVHHRFFCDICVKYNKNFTEEYKTY
TRETLARHRRMGDEDDTSHRGHPICEYCDCRYLDSDSLLRHLRLDHYFCHFCDQLGSNQY
YGEYKDLRVHFRKGHFLCEIDECADEQFTSVFSTELDLKAHRAAVHSKSLNKQQQKADRN
IDLGFHYARPPGRGGRGIGISSDIGRGRGGRGRGRARDEDLELAKALSLQEISNKESNRS
GRPTVERPQTRTRDPEPPRDSPVESPHTLNLTEDFPGLGASVYNKPPPVTSGSYLCDIAS
DPPAVTSVASSTTTAVKLAAAVGRSTGSFSKEEDFPSLGSGKVRQQTRGVWGGTPLAGPQ
GTGSRPRTKKKSTTPSMPVSVNVPQPVVGPRSRIDVKDSEQFPSLGKGANLPLSSSSGWV
QIPTVPPKKTYNVPKAKDLAYSQEPVRNTIQAKPTKSKISTGNSDNIVQDEIISVRQGFG
KHGMQITMIKQSDEISDIERPVELPSGGAGSMSVKTVDPATFSLLSGQKMDRASQKSGFD
DFMVEGNEFPELGGGARNNSRVKGFGISKTEGTNLLSNWKQDSRQQKKKKIVSLAEISND
IFPSSKVDNISDLERKKKKHAQQERVKNTEKNNFTASKSNSTESKHSNHDIQLKSNFATD
DFPSLGNPHSNELSGSPNWYEEEVPKVADMVIKKSNFEMEENDFPSLGGVGSATRNQTKK
GKKKKKNKNAQSAMEVSKHFKGGFVDPSQNGDITGNGPFGCIAA

Nucleotide sequence

Length: 3,302

>Harore.CG.MTP2014.S30.g12564.01.t
ATCGTTTGTTAAGTATACAGAAAATAAAAATTGGAAATTCATTAGCATTAAGTTACCGCC
ATTAAATCTGCCAAAGTTACAATGGAGGCCAACAAGAATACCGAAAAGAAACCAATCAAA
TCTAAAGGCCAGTACAAGAAGAGCAAGGGAGGTCAACAGCTGAGACAGTTCACGCCGAGG
AAACGTGTCAGCGAATGTGAGGATGACGGAACGTGCGATCTCTGTGCGCTTCCTATCGAG
ATATATGCGATAGGTCCTTGCGATCATCCCATATGCTACCGCTGTTCGGCGAAAATGAGG
ATCCTTTGCGAGCAAACCCATTGTGCGGTCTGTCGAGTCGAGATGAAAAAGATCATTTAC
AGTAAAGTAAAAATGAGATTTCAAATTGCCAGCGAATTGAAGTCGGCTAAACCAGATAAA
TCAAACAACTGGTTTACGGATGAAGAAGTAAAGAAAAAGTATAAAAAACTATTCCAACAT
ATATGCGGTTTATGTCCGGATCGCGACCCCGAATTCGCTTTTGATTTACTCCAGGCTCAC
GTTAGAAAAGTGCATCATCGGTTTTTCTGTGATATTTGTGTCAAATATAATAAGAATTTC
ACAGAGGAATACAAAACTTATACTCGTGAAACTCTGGCTAGACACAGGAGAATGGGAGAT
GAAGATGACACCTCGCATCGCGGGCATCCGATATGCGAATATTGCGATTGTCGTTACTTA
GACAGTGATTCCCTCCTCCGTCACTTGAGATTAGATCATTACTTTTGTCATTTCTGTGAT
CAACTTGGGTCTAATCAATATTATGGGGAGTATAAAGACTTGAGGGTGCATTTTCGCAAG
GGTCATTTCCTCTGTGAAATTGACGAATGTGCGGATGAACAGTTCACATCTGTATTTTCA
ACGGAACTTGACCTTAAGGCTCATAGAGCTGCCGTTCACAGCAAAAGTCTTAACAAACAG
CAACAGAAGGCAGACAGGAACATTGATCTTGGTTTTCACTATGCAAGGCCACCTGGTAGA
GGTGGCAGAGGTATTGGAATCTCATCAGACATTGGAAGGGGCAGAGGAGGAAGAGGTCGG
GGCAGAGCCCGAGATGAAGATCTGGAACTTGCAAAAGCTTTATCTCTGCAAGAAATATCG
AACAAAGAATCAAATAGAAGTGGAAGACCGACAGTGGAACGTCCTCAAACAAGAACAAGA
GATCCAGAGCCTCCACGTGACTCTCCAGTGGAGTCTCCGCATACACTGAATCTTACGGAA
GACTTCCCGGGTCTTGGTGCATCCGTGTACAACAAACCCCCTCCTGTTACCAGTGGATCT
TATCTCTGCGATATTGCTAGTGATCCCCCTGCAGTGACTTCAGTGGCATCTAGCACCACT
ACAGCCGTAAAATTAGCCGCCGCTGTCGGAAGATCAACCGGCTCCTTCTCCAAAGAAGAG
GATTTTCCTTCTCTAGGATCAGGTAAAGTCAGGCAGCAAACGAGGGGGGTTTGGGGTGGA
ACCCCTTTAGCAGGACCCCAAGGGACTGGTTCAAGACCCAGAACAAAGAAAAAATCTACT
ACCCCAAGCATGCCTGTGAGTGTAAATGTTCCCCAACCTGTCGTGGGTCCCCGGAGCAGA
ATAGACGTCAAAGATAGTGAACAGTTCCCTTCATTGGGAAAAGGAGCAAATCTCCCACTT
AGTAGTTCATCTGGTTGGGTCCAAATCCCAACTGTGCCTCCGAAGAAAACCTACAATGTT
CCAAAAGCAAAAGATTTGGCATACTCTCAAGAACCAGTCAGAAATACTATCCAGGCGAAA
CCAACTAAATCAAAAATATCGACAGGAAATTCCGATAATATAGTCCAGGACGAAATTATT
TCTGTTAGACAAGGTTTCGGCAAACACGGAATGCAGATCACCATGATCAAACAATCTGAT
GAAATCAGCGACATCGAGAGACCCGTGGAGTTACCCAGTGGTGGGGCTGGAAGCATGTCC
GTAAAGACAGTTGATCCCGCTACCTTTTCGCTGCTGTCAGGACAAAAGATGGACCGCGCT
TCGCAGAAATCTGGCTTCGATGATTTCATGGTGGAGGGAAACGAATTCCCAGAGCTTGGC
GGAGGTGCTAGAAATAACAGCCGGGTTAAGGGTTTTGGAATATCGAAAACAGAAGGGACA
AACTTACTATCCAATTGGAAACAAGATTCTCGACAGCAGAAAAAGAAAAAAATTGTCAGC
CTAGCAGAAATAAGCAATGATATTTTCCCTAGCAGTAAAGTAGATAATATAAGTGATTTA
GAAAGAAAGAAAAAGAAACATGCCCAGCAAGAAAGGGTAAAAAACACTGAAAAGAATAAT
TTTACTGCTTCTAAAAGTAATTCGACTGAGAGCAAGCACTCTAATCACGATATCCAACTG
AAATCAAATTTTGCCACTGATGATTTTCCTTCACTGGGAAACCCACATAGCAATGAACTA
TCTGGTTCACCAAACTGGTACGAAGAAGAGGTACCAAAAGTAGCTGATATGGTCATCAAG
AAGAGCAATTTTGAAATGGAAGAGAATGATTTCCCATCACTCGGTGGTGTCGGCAGTGCT
ACGAGGAACCAGACGAAAAAAGGCAAAAAGAAAAAGAAGAATAAAAATGCTCAGTCCGCT
ATGGAAGTTTCAAAACATTTCAAAGGAGGTTTTGTGGATCCTAGTCAGAATGGAGACATC
ACAGGAAATGGACCATTTGGCTGCATTGCTGCGTGATGCCGACGGTAGTACTGACAATTC
GCTGTCTTCTATTTTACAAGAGCATAATGTTTTTGTCAGTAACGGAAACTCTGTCCAGAA
AGAGGACCAACTTGATGGTCAGCAATATGCAGAAGACGTGAACGATGATATATATATCTC
ATTAATGGATGAAAAACCCAGTAAAAAAGATATCGACGGTAGGAATGAATGGTTGTTCAA
CGCCATCGAACTGCTTTGTGGAACTGAGAAGAAGTACTCGGACTTCAAAACAGCTTCTGC
AAAATACAGACGGGGAACGATTTCCGGGAACGAATATTATAAGACGTGTCGTATCCTGCT
TGGAAAAAGATATTTTTCTGAGGTGTTTACAGAGTTAGTTGATTTGCTGCCAGATCAAGA
CAAGCAAGATGAGCTAACTCAGATTCACGTCCCGTGATTTTGTTGCCAACATGTTATTAC
AGCTAATGTTATTTATATTTTAATCTAGGTGGTAAGAATGTGTCGGTTCAAAATAAAAGC
ATTGTTATTGCTTCAATACTTTGTATCATGATTGTTGGTTAAATAAATTGAATTAATCAT
AA

InterProScan

ProSiteProfiles
Znf_RING (IPR001841) - T[45-85] 9.052
SMART
Znf_C2H2_type (IPR013087) - T[133-158] 310.0 - T[203-226] 5.1 - T[227-255] 24.0 - T[256-286] 37.0
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[205-226] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZN598_HUMAN 50.189 % 296 8.95E-87





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