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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C2.36.v3.A...' > 
  2. Transcript 'KH2012:KH.C2.526.v1....' > 
  3. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S30.g12564.02.t

Possible name(s)

MECOM; ZNF598; ZNF711

Gene model

Harore.CG.MTP2014.S30.g12564

Location

S30 [267,631 / 272,985]

Sequences

Amino acid sequence

Length: 1,002

>Harore.CG.MTP2014.S30.g12564.02.p
MEANKNTEKKPIKSKGQYKKSKGGQQLRQFTPRKRVSECEDDGTCDLCALPIEIYAIGPC
DHPICYRCSAKMRILCEQTHCAVCRVEMKKIIYSKVKMRFQIASELKSAKPDKSNNWFTD
EEVKKKYKKLFQHICGLCPDRDPEFAFDLLQAHVRKVHHRFFCDICVKYNKNFTEEYKTY
TRETLARHRRMGDEDDTSHRGHPICEYCDCRYLDSDSLLRHLRLDHYFCHFCDQLGSNQY
YGEYKDLRVHFRKGHFLCEIDECADEQFTSVFSTELDLKAHRAAVHSKSLNKQQQKADRN
IDLGFHYARPPGRGGRGIGISSDIGRGRGGRGRGRARDEDLELAKALSLQEISNKESNRS
GRPTVERPQTRTRDPEPPRDSPVESPHTLNLTEDFPGLGASVYNKPPPVTSGSYLCDIAS
DPPAVTSVASSTTTAVKLAAAVGRSTGSFSKEEDFPSLGSGKVRQQTRGVWGGTPLAGPQ
GTGSRPRTKKKSTTPSMPVSVNVPQPVVGPRSRIDVKDSEQFPSLGKGANLPLSSSSGWV
QIPTVPPKKTYNVPKAKDLAYSQEPVRNTIQAKPTKSKISTGNSDNIVQDEIISVRQGFG
KHGMQITMIKQSDEISDIERPVELPSGGAGSMSVKTVDPATFSLLSGQKMDRASQKSGFD
DFMVEGNEFPELGGGARNNSRVKGFGISKTEGTNLLSNWKQDSRQQKKKKIVSLAEISND
IFPSSKVDNISDLERKKKKHAQQERVKNTEKNNFTASKSNSTESKHSNHDIQLKSNFATD
DFPSLGNPHSNELSGSPNWYEEEVPKVADMVIKKSNFEMEENDFPSLGGVGSATRNQTKK
GKKKKKNKNAQSAMEVSKHFKGGFVDPSQNGDITGNGPFGCIAANGNSVQKEDQLDGQQY
AEDVNDDIYISLMDEKPSKKDIDGRNEWLFNAIELLCGTEKKYSDFKTASAKYRRGTISG
NEYYKTCRILLGKRYFSEVFTELVDLLPDQDKQDELTQIHVP

Nucleotide sequence

Length: 3,336

>Harore.CG.MTP2014.S30.g12564.02.t
TGGGGATGTGCCAAGAAGCGAACCTTGAAGAGTTCCTATTTCAATTTTGATCTTGTGTAT
TTATTACCGGCTTTCTCTTGCGCAACTCATTGCAACTGTGGTATCGTTTGTTAAGTATAC
AGAAAATAAAAATTGGAAATTCATTAGCATTAAGTTACCGCCATTAAATCTGCCAAAGTT
ACAATGGAGGCCAACAAGAATACCGAAAAGAAACCAATCAAATCTAAAGGCCAGTACAAG
AAGAGCAAGGGAGGTCAACAGCTGAGACAGTTCACGCCGAGGAAACGTGTCAGCGAATGT
GAGGATGACGGAACGTGCGATCTCTGTGCGCTTCCTATCGAGATATATGCGATAGGTCCT
TGCGATCATCCCATATGCTACCGCTGTTCGGCGAAAATGAGGATCCTTTGCGAGCAAACC
CATTGTGCGGTCTGTCGAGTCGAGATGAAAAAGATCATTTACAGTAAAGTAAAAATGAGA
TTTCAAATTGCCAGCGAATTGAAGTCGGCTAAACCAGATAAATCAAACAACTGGTTTACG
GATGAAGAAGTAAAGAAAAAGTATAAAAAACTATTCCAACATATATGCGGTTTATGTCCG
GATCGCGACCCCGAATTCGCTTTTGATTTACTCCAGGCTCACGTTAGAAAAGTGCATCAT
CGGTTTTTCTGTGATATTTGTGTCAAATATAATAAGAATTTCACAGAGGAATACAAAACT
TATACTCGTGAAACTCTGGCTAGACACAGGAGAATGGGAGATGAAGATGACACCTCGCAT
CGCGGGCATCCGATATGCGAATATTGCGATTGTCGTTACTTAGACAGTGATTCCCTCCTC
CGTCACTTGAGATTAGATCATTACTTTTGTCATTTCTGTGATCAACTTGGGTCTAATCAA
TATTATGGGGAGTATAAAGACTTGAGGGTGCATTTTCGCAAGGGTCATTTCCTCTGTGAA
ATTGACGAATGTGCGGATGAACAGTTCACATCTGTATTTTCAACGGAACTTGACCTTAAG
GCTCATAGAGCTGCCGTTCACAGCAAAAGTCTTAACAAACAGCAACAGAAGGCAGACAGG
AACATTGATCTTGGTTTTCACTATGCAAGGCCACCTGGTAGAGGTGGCAGAGGTATTGGA
ATCTCATCAGACATTGGAAGGGGCAGAGGAGGAAGAGGTCGGGGCAGAGCCCGAGATGAA
GATCTGGAACTTGCAAAAGCTTTATCTCTGCAAGAAATATCGAACAAAGAATCAAATAGA
AGTGGAAGACCGACAGTGGAACGTCCTCAAACAAGAACAAGAGATCCAGAGCCTCCACGT
GACTCTCCAGTGGAGTCTCCGCATACACTGAATCTTACGGAAGACTTCCCGGGTCTTGGT
GCATCCGTGTACAACAAACCCCCTCCTGTTACCAGTGGATCTTATCTCTGCGATATTGCT
AGTGATCCCCCTGCAGTGACTTCAGTGGCATCTAGCACCACTACAGCCGTAAAATTAGCC
GCCGCTGTCGGAAGATCAACCGGCTCCTTCTCCAAAGAAGAGGATTTTCCTTCTCTAGGA
TCAGGTAAAGTCAGGCAGCAAACGAGGGGGGTTTGGGGTGGAACCCCTTTAGCAGGACCC
CAAGGGACTGGTTCAAGACCCAGAACAAAGAAAAAATCTACTACCCCAAGCATGCCTGTG
AGTGTAAATGTTCCCCAACCTGTCGTGGGTCCCCGGAGCAGAATAGACGTCAAAGATAGT
GAACAGTTCCCTTCATTGGGAAAAGGAGCAAATCTCCCACTTAGTAGTTCATCTGGTTGG
GTCCAAATCCCAACTGTGCCTCCGAAGAAAACCTACAATGTTCCAAAAGCAAAAGATTTG
GCATACTCTCAAGAACCAGTCAGAAATACTATCCAGGCGAAACCAACTAAATCAAAAATA
TCGACAGGAAATTCCGATAATATAGTCCAGGACGAAATTATTTCTGTTAGACAAGGTTTC
GGCAAACACGGAATGCAGATCACCATGATCAAACAATCTGATGAAATCAGCGACATCGAG
AGACCCGTGGAGTTACCCAGTGGTGGGGCTGGAAGCATGTCCGTAAAGACAGTTGATCCC
GCTACCTTTTCGCTGCTGTCAGGACAAAAGATGGACCGCGCTTCGCAGAAATCTGGCTTC
GATGATTTCATGGTGGAGGGAAACGAATTCCCAGAGCTTGGCGGAGGTGCTAGAAATAAC
AGCCGGGTTAAGGGTTTTGGAATATCGAAAACAGAAGGGACAAACTTACTATCCAATTGG
AAACAAGATTCTCGACAGCAGAAAAAGAAAAAAATTGTCAGCCTAGCAGAAATAAGCAAT
GATATTTTCCCTAGCAGTAAAGTAGATAATATAAGTGATTTAGAAAGAAAGAAAAAGAAA
CATGCCCAGCAAGAAAGGGTAAAAAACACTGAAAAGAATAATTTTACTGCTTCTAAAAGT
AATTCGACTGAGAGCAAGCACTCTAATCACGATATCCAACTGAAATCAAATTTTGCCACT
GATGATTTTCCTTCACTGGGAAACCCACATAGCAATGAACTATCTGGTTCACCAAACTGG
TACGAAGAAGAGGTACCAAAAGTAGCTGATATGGTCATCAAGAAGAGCAATTTTGAAATG
GAAGAGAATGATTTCCCATCACTCGGTGGTGTCGGCAGTGCTACGAGGAACCAGACGAAA
AAAGGCAAAAAGAAAAAGAAGAATAAAAATGCTCAGTCCGCTATGGAAGTTTCAAAACAT
TTCAAAGGAGGTTTTGTGGATCCTAGTCAGAATGGAGACATCACAGGAAATGGACCATTT
GGCTGCATTGCTGCTAACGGAAACTCTGTCCAGAAAGAGGACCAACTTGATGGTCAGCAA
TATGCAGAAGACGTGAACGATGATATATATATCTCATTAATGGATGAAAAACCCAGTAAA
AAAGATATCGACGGTAGGAATGAATGGTTGTTCAACGCCATCGAACTGCTTTGTGGAACT
GAGAAGAAGTACTCGGACTTCAAAACAGCTTCTGCAAAATACAGACGGGGAACGATTTCC
GGGAACGAATATTATAAGACGTGTCGTATCCTGCTTGGAAAAAGATATTTTTCTGAGGTG
TTTACAGAGTTAGTTGATTTGCTGCCAGATCAAGACAAGCAAGATGAGCTAACTCAGATT
CACGTCCCGTGATTTTGTTGCCAACATGTTATTACAGCTAATGTTATTTATATTTTAATC
TAGGTGGTAAGAATGTGTCGGTTCAAAATAAAAGCATTGTTATTGCTTCAATACTTTGTA
TCATGATTGTTGGTTAAATAAATTGAATTAATCATA

InterProScan

ProSiteProfiles
Znf_RING (IPR001841) - T[45-85] 9.052
SMART
Znf_C2H2_type (IPR013087) - T[133-158] 310.0 - T[203-226] 5.1 - T[227-255] 24.0 - T[256-286] 37.0
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[205-226] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZN598_HUMAN 50.189 % 295 1.28E-85