- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S315.g14916.01.t
Possible name(s)
RPL23A
Gene model
Location
S315 [39,369 / 42,720]
Amino acid sequence
Length: 145
>Harore.CG.MTP2014.S315.g14916.01.p
MAPKGAKEKALKAKKAVKKGLHSHRKKKIRTSVHFHIPKTLKHQRKPKYPRKSTQKRNKM
DQFAIIKHPLTTESAMKKIEDNNTLVFVVDLKANKPQIKQAVKKMYDIDVSRVNTLIRPD
GKKKAYVKLAPDYDALDVANKIGII
Nucleotide sequence
Length: 573
>Harore.CG.MTP2014.S315.g14916.01.t
CTCTAACCATCGACGGTAGGGTTACAGAGTAATCAATTTTATACCACTTGAGGGCGTATT
AAAATTCACCACGTTCTTTTCGTTTCTGGTGAATTAGGAAAATGGCACCAAAAGGAGCTA
AGGAGAAAGCTTTGAAGGCGAAGAAGGCCGTCAAAAAAGGCCTGCATTCGCACAGGAAGA
AGAAAATCAGAACCTCTGTGCATTTTCATATTCCGAAAACATTGAAACATCAGAGAAAAC
CGAAATATCCCAGAAAGAGTACGCAGAAGAGAAATAAGATGGATCAGTTCGCGATCATCA
AACATCCGTTGACGACTGAAAGTGCAATGAAGAAAATTGAGGATAACAACACACTGGTAT
TCGTTGTTGATTTGAAGGCAAACAAACCACAGATCAAGCAGGCCGTTAAGAAGATGTACG
ACATTGATGTGTCAAGGGTCAACACCCTGATTCGTCCCGATGGGAAGAAGAAAGCGTATG
TCAAACTTGCTCCTGATTACGATGCACTAGATGTCGCCAACAAGATTGGAATTATCTGAT
TTTGGTAGAAAATAAAACTAAACCTTCGCAAAA
| Pfam |
Ribosomal_L23/L25_N (IPR005633) - T[6-55] 1.1E-22 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[27-145] 7.0E-62 |
| SUPERFAMILY |
Ribosomal_L23/L15e_core_dom_sf (IPR012678) - T[63-138] 1.55E-28 |
| Pfam |
Ribosomal_L25/23 (IPR013025) - T[65-128] 8.9E-17 |
| Hamap |
Ribosomal_L25/23 (IPR013025) - T[65-145] 23.207 |
| TIGRFAM |
Ribosomal_L23 (IPR019985) - T[69-145] 8.1E-31 |
| ProSitePatterns |
Ribosomal_L23/L25_CS (IPR001014) - T[123-138] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RL23A_HUMAN | 80.159 % | 206 | 1.86E-69 |