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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S31.g02867.01.t

Possible name(s)

RPL3; RPL3L

Gene model

Harore.CG.MTP2014.S31.g02867

Location

S31 [216,773 / 220,737]

Sequences

Amino acid sequence

Length: 348

>Harore.CG.MTP2014.S31.g02867.01.p
MTHILRTVDRLGSKMNKKEVVEAVTILETPPMIVIGVIGYIQTPRGLRGLRTIFAEHISD
ECKRRFYKNWYASKKKAFSKACRKWQDEDGKKQIETDFKKLEKYCTVIRVIAHTQMKLLP
LRQKKSHIMEIQVNGGSIADKIKYARDLLEKPFKVSDVFGQDEMIDIIGVTKGHGYAGVT
SRWNTKKLPRKTHKGLRKVACIGAWHPARVAFSVARSGQNGYHHRTEINKKIFRIGDGIH
KEGGKLIKNNASTAVDITDKSITPMGGFPHYGEVKNDYVMLKGCCIGPKKRVLTLRKSLL
VHTKRVSTEKITLKWIDTSSKFGHGRFQTHEEKRAFMGPLKKDRQVAE

Nucleotide sequence

Length: 1,819

>Harore.CG.MTP2014.S31.g02867.01.t
ATGACCCGTAACGACATTGGCTGTTTCGAGACTATTACTACTGCTCATGTGCCCCACATC
ATTCCTAGTTCTCTCTCTTTGAACGAATCGGCGTCATGAAAGTTTTCAGCTCCTCGGCAC
GGATCCCTCGCCTTTCTACCCAGGAAGCGATGTAGACATCACCGTGGTAAAATTCGTTCA
TTTCCCAACGATGACCCGTCTAAACCATGTCACCTCACTGCATTCGTGAGCTACAAAGCT
GGAATGACCCATATTTTGAGAACTGTTGATCGTCTTGGCTCGAAAATGAACAAGAAAGAA
GTGGTCGAGGCTGTAACTATCTTGGAAACACCTCCCATGATTGTTATCGGCGTCATTGGT
TACATCCAAACTCCCAGAGGCCTGCGGGGACTCCGAACTATATTTGCTGAACATATCAGT
GATGAGTGCAAGAGACGCTTCTACAAAAACTGGTATGCTTCGAAGAAGAAGGCTTTCAGC
AAGGCTTGTCGTAAGTGGCAAGATGAGGATGGCAAGAAGCAGATTGAGACCGATTTCAAA
AAATTGGAGAAATACTGCACTGTTATCAGAGTCATTGCCCACACCCAGATGAAACTTCTT
CCCCTGCGTCAAAAGAAGTCTCACATCATGGAGATTCAAGTGAATGGGGGCTCCATCGCC
GATAAAATCAAGTACGCTCGTGATCTCCTCGAGAAACCATTCAAGGTGTCAGATGTATTC
GGCCAAGATGAAATGATTGACATTATAGGAGTGACAAAGGGACATGGTTATGCAGGTGTT
ACATCAAGATGGAACACTAAGAAATTGCCACGTAAGACTCACAAGGGTCTGCGCAAAGTC
GCCTGTATCGGTGCATGGCATCCAGCGCGTGTCGCCTTCTCTGTTGCTAGATCTGGTCAA
AATGGTTACCATCACCGTACCGAAATTAACAAGAAGATTTTCCGTATCGGGGATGGAATT
CATAAGGAAGGTGGAAAGCTGATCAAAAATAATGCTTCGACAGCGGTAGACATTACTGAT
AAGAGCATTACACCAATGGGTGGATTTCCTCATTATGGCGAAGTGAAAAATGATTATGTC
ATGCTAAAAGGATGTTGCATTGGTCCAAAAAAACGCGTGCTGACCTTGCGTAAGTCTTTG
TTGGTTCACACCAAGCGTGTTTCTACGGAGAAGATCACTCTCAAATGGATTGATACTTCC
TCCAAATTTGGGCATGGTCGATTCCAGACGCACGAGGAGAAGAGAGCCTTCATGGGTCCT
CTCAAAAAGGATCGCCAGGTGGCAGAATAAGCTTATTCTGTTACAAGTTCAGCTTGTAAA
CCTGCGTTATAAAAAAATAAAATAAAATGAAATGGTGGAATTACTTGCGATTTTTTGCAG
TCTAGTATTCAACCAACCAATGGATAGTGTTTACTTTGCTATTTCTTGCTGTGGTTGGTA
CATTTCCACTTACTGGTTGCAAGAGCTCATCTGACATGGCAAATGAGGGATGGAGATGGT
CTGTTGATTTTATGCATCCACACTTGGGTAGTATGATGTACCATATAGTACCAGAAACTG
CACGATTTAATTACGGGTTTTGTGGGTCTACTCTAGTCGGGCGAGGCTTTTCATGACTCG
TGGTTATTGAAGGGTTGCCCTTTTGGTAGCTGTTTTTTCTCATCTTTGAACTTTTGTCTA
ATCTCCAGATGCACTGGTACCGAAATTATTAAATGAGCTGTTTTGACTAGTACATACAGA
TTGTCGAAACTGTTTGCCAGTCACTAGAACGTTTCGGTGGCCATGCCAGAATATGAATTG
TACTTTTTAATAAACCTGC

InterProScan

SUPERFAMILY
Transl_B-barrel_sf (IPR009000) - T[1-323] 1.32E-90
Pfam
Ribosomal_L3 (IPR000597) - T[1-323] 2.7E-148
ProSitePatterns
Ribosomal_L3_CS (IPR019926) - T[159-182] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL3_HUMAN 76.149 % 566 0
RL3L_HUMAN 71.345 % 506 0