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TRANSCRIPT CARD

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  1. Clone 'cinc032n13' > 
  2. Transcript 'KH2012:KH.L24.2.v2.B...' > 
  3. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S31.g06478.01.t

Possible name(s)

ECHDC2; ECHDC3; ECHS1

Gene model

Harore.CG.MTP2014.S31.g06478

Location

S31 [251,459 / 254,754]

Sequences

Amino acid sequence

Length: 284

>Harore.CG.MTP2014.S31.g06478.01.p
MLSSIRVKLLPGLERGLLSANRRYTTEPLTLATEENGIRRIVLNNPKKRNALSLDMLAAL
HNDITKNIHSDSLRVIVLSANGSVFSAGHDLKELISSKDRSKHAKIFGLCSDVMELIQDI
PVPVVCEVDGFATAAGCQLVASCDISIASEKSSFCTPGVNVGLFCSTPAVALGRSVPRKL
ALDMLFTGDIISAEKALLHGLVSRVVPSELLAAETDKVVGKICENSRSVISMGKASFYRQ
IVKDRNSAYKDAATVMVENLGMQDACEGISAFLEKRKPTWNHKF

Nucleotide sequence

Length: 2,554

>Harore.CG.MTP2014.S31.g06478.01.t
GTCGAAGTAGAGAGGTCAAATTAAGGGGTCATATTTATGTTGTGATTTACCGATTGACAG
TGGATCATGCTTTCCTCCATTCGCGTGAAGTTGCTTCCTGGGTTGGAGAGAGGATTACTC
TCCGCGAATCGCAGATACACCACCGAGCCTTTAACGCTCGCTACGGAGGAGAATGGAATT
CGGAGAATCGTTCTGAATAATCCGAAGAAAAGGAATGCACTGAGTTTGGATATGCTAGCT
GCCCTGCATAATGACATCACTAAAAACATACATTCGGATTCTCTTCGTGTCATCGTCCTT
TCTGCTAATGGTTCTGTGTTTAGTGCTGGCCATGATCTCAAAGAATTAATATCCTCGAAA
GACAGATCAAAGCATGCGAAAATTTTCGGGCTGTGTAGCGACGTGATGGAGCTTATTCAG
GATATTCCAGTACCAGTTGTATGTGAAGTAGATGGATTCGCGACAGCTGCTGGATGTCAG
CTCGTTGCTTCTTGCGATATTTCAATTGCATCAGAGAAATCAAGTTTTTGTACACCTGGT
GTCAATGTTGGTCTATTCTGTTCAACCCCAGCAGTAGCTCTTGGTCGATCGGTGCCAAGA
AAGTTGGCTCTTGATATGCTGTTTACTGGTGATATTATTTCCGCAGAAAAGGCATTGTTG
CATGGTCTAGTCAGCAGAGTTGTTCCCTCCGAGTTATTAGCTGCAGAGACAGATAAAGTA
GTGGGAAAAATATGTGAGAACAGTCGGTCCGTCATTTCGATGGGAAAAGCAAGTTTTTAT
AGACAGATTGTCAAAGATAGAAATTCTGCCTATAAGGATGCCGCTACTGTTATGGTTGAG
AACTTGGGCATGCAAGATGCCTGTGAAGGAATATCTGCTTTTCTTGAGAAAAGAAAGCCT
ACTTGGAATCACAAATTTTAAAAAGTTCAACGATCTTCATTATTTTAGCATTTTGAACAT
ATTTGTCGGGCTCTATCATGGTGCAATTATGCTTTTTGCTTAATAATTTCTCCTATAATG
GGCACTGCGGTATTCATTATTTGTGTACCTCCCATTTGTTGTTGTCCATTCATGTAATTT
CTTACATTAATTATATCTGAAGTCAAAAAAAATTGAACCTATATTCTCTGCCATAAGTCT
GCACCCCTCTAAATTTATGTCCTACATGGATAATTGTGACATCCATAGAGGAATGTAGTT
AAGTATCATAACCAAAAGCTCATTTGCTAACATTTTTTTTGTTTATTTCATTGTAAAAAT
CTACAGACAGGAAAAGTACCCTGGTTGGAATAACTAAAAGAACACTAATTGAAAGAGCGA
AATAAATTATAAATGATGATTTTGTGCAGGTAATGTTTGTGAGGATCAACATAACATGAT
TGTTTATATAAGCAAGTAAGATTTGAAGAAATAGAGAAATAGTCGAACAAAAATCTTCCT
GCATTCAGGACACCAACAAATAAGTGGTCATGGAGAGTAACAAAACACATGGCTCGAAAA
TTGTTAGCAAAATATCAGTAATAAATTAGATATATATTTAAAAGTTTACTCTATTGCATA
GAGTGGAACTTGTGCCTATTGATATAGTAAGAGTTCACTGCCTATCAGGCGGTTTCACTC
CTGCCTCGCATGACAAGAGCTCATACAGGCTATTTTTCAACAGCCATACTTTTTTTAAGT
CTGGAACTAAAGACGGTAGGTTGATTGCATTAGTAATTTGATTTATATGTCCGTCTTTGA
CTTTTGTTTACCCTTCTTACTAAAAGGATTTCCGAACATGGCGCTCGGCCTTAATCTCAG
ATTCCACGAAGAGGATGCGAGCTCTGAAGACTTTGAAGAAAACTTTTTTACCGAGGTAGG
TGAAATTTTCATATCGAAAATATCCGAACAGGACTTTGCAGGTTTCATTTTCGATTCGTT
CATATCTGGCACTGGTGACGTGGCTAAATAATTTCTGGAAGGGTGGTGGATTCCGTTTCC
AAGCACTCTGTTAGTAACGGTGTTGCTTCGCAAGCGTTTCACTCGAGAGTATTTGCGAGT
GAAGGGTTGATAATCCGAAATCATATTGAACTGTCCCGATAAGCTTCTGCAATTCAATGA
TGAACGTTGACCAAATGCATTTTATTGATACAATTTACAGCTGATTTGTTGACACCAATC
AAATGTATGTTCTTACCCATCTTCTTCGGATTTGCCAGACGCATTTAAGGAGTTTTGGGA
CGATTGCTTCTGTCGAAACAATCTGTCCCACGATTTCATAAGATCGTTAGACTTCCGTTT
GCTATAATTGGTTGACGATGTCTGATCACTGATGCTTTTCAACAAAATGCGAGGTTTCGT
TTCGCCGTTCGTGGGAGCCATGAATGTGTATTGTACGTATGAGCCATCTGCCTCGGAGCC
ACTGTCACTCGCTCTCGACGTCAGACGCTCTTGAACGCTACGTTCCACATCAGACGGAAC
TTTCATCACCTTAGGAATAAAAATTATTGTAAAATCTGCAAAAATGTATCCTAAATGTTA
TGTTAGTTGAGTCATTACCTCTATGTGATGATCT

InterProScan

SUPERFAMILY
ClpP/crotonase-like_dom_sf (IPR029045) - T[33-281] 1.89E-68
Pfam
Enoyl-CoA_hydra/iso (IPR001753) - T[34-282] 1.2E-48
Gene3D
enoyl-CoA_hydra_C (IPR014748) - T[226-282] 8.2E-25

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ECHM_HUMAN 30.924 % 117 5.03E-31
ECHD2_HUMAN 26.692 % 88.2 2.53E-20
ECHD3_HUMAN 57.955 % 316 1.42E-108