- Transcript 'Moocul.CG.ELv1_2.S10...' >
- Clone 'cima879098' >
- Transcript 'Boleac.CG.SB_v3.S180...' >
- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S31.g08208.01.t
Possible name(s)
FOXA1; FOXA2; FOXA3
Gene model
Location
S31 [111,327 / 113,148]
Amino acid sequence
Length: 606
>Harore.CG.MTP2014.S31.g08208.01.p
MMLSSPPSKYQSFQQSYGASMSNMVNAMPSSYVNSINPMSITGNQMTGIPNPMNQGFPGG
ALNGMSSVSSMQSHPSHSQMAVGVGGMSPYPSMNPGVGLAPNLPIMSMGINRRTEKTYRR
NYTHAKPPYSYISLITMALQSSKQKMMTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSF
NDCFVKVARSPDKPGKGSYWALHQDAHNMFENGCYLRRQKRFKCKPKGNVKNANKNGSEP
ANLPPLENVQHITPPTTPTNQDSASSSPNSQNGYGETEVALGTSETVMPPPAIENREEPT
RNSQENSAGEQSPNALLEQQHHIPTYSTTHSHIDVPASGIPREELLPSHHQQHPQHHHTQ
SMHPVHRQSQVDHRLARHDSNNGPSPPLENGLPTAPVTSDGLVSLGSSTYSKSDTLANTQ
HQFYLSQLQAAGVQHNPHHPHYPISHAHHPFAHSFSHPFSISRIMNVSDGQQQQNKEMRA
YHEAMQYAQHYNVAASHVSNQNTGHVMASLEPVPPSSTPDSLHGSNSSSICTSAGMSRLS
SSPSESQAHLTHQQHPYYQMQYHMESEAGIHHAAATTMSQVGLEDGLNAAYYQGCVQPHG
TNVAMA
Nucleotide sequence
Length: 1,821
>Harore.CG.MTP2014.S31.g08208.01.t
ATGATGCTTTCTTCGCCTCCGTCAAAGTATCAGAGCTTTCAGCAGTCGTATGGAGCAAGC
ATGTCAAATATGGTCAACGCTATGCCATCTTCTTACGTCAATTCAATTAATCCCATGTCC
ATAACCGGGAATCAAATGACAGGAATTCCGAACCCGATGAATCAAGGGTTCCCTGGCGGC
GCACTAAACGGCATGAGCTCGGTCAGTTCAATGCAAAGTCACCCTTCTCATTCACAAATG
GCGGTCGGCGTCGGCGGAATGAGTCCTTACCCCAGCATGAACCCAGGTGTTGGTCTAGCT
CCAAACCTCCCGATCATGTCGATGGGGATAAACAGAAGAACGGAAAAGACCTACAGAAGA
AACTACACTCACGCTAAGCCACCGTACAGTTACATATCACTTATCACGATGGCGCTGCAA
TCTTCCAAACAGAAAATGATGACCCTGAGTGAAATCTATCAATGGATCATGGACCTGTTC
CCGTTCTACCGCCAGAATCAACAGAGATGGCAAAATTCCATTCGACACAGTCTTTCATTC
AACGACTGCTTCGTCAAAGTAGCCCGCTCACCTGATAAGCCAGGCAAGGGTTCCTATTGG
GCACTCCACCAAGACGCGCATAACATGTTCGAAAATGGCTGCTACCTGCGTCGCCAGAAG
CGTTTCAAATGCAAGCCAAAGGGAAACGTGAAAAATGCTAACAAAAACGGCTCGGAACCT
GCAAATCTTCCTCCACTGGAAAACGTTCAACACATTACTCCGCCTACAACCCCTACCAAT
CAAGACTCGGCTTCTAGCAGTCCAAATAGTCAAAATGGTTACGGCGAAACAGAAGTTGCG
CTTGGAACCTCTGAAACTGTGATGCCTCCTCCTGCTATCGAAAACCGCGAGGAACCGACA
AGAAACAGTCAGGAAAATTCCGCTGGGGAACAATCTCCGAATGCCCTATTGGAGCAGCAA
CATCATATTCCAACGTACTCCACAACTCATTCTCACATTGACGTTCCGGCCTCGGGAATA
CCCCGCGAAGAATTGCTTCCGTCTCATCACCAGCAACATCCTCAACATCACCATACTCAA
AGTATGCATCCTGTACACCGACAATCACAGGTCGACCATAGGCTCGCTCGCCATGACAGC
AATAATGGGCCTTCACCACCACTCGAAAACGGACTACCGACAGCTCCGGTGACATCGGAC
GGACTTGTATCGCTCGGTAGTTCCACATATAGCAAGAGCGACACACTTGCTAACACGCAG
CATCAGTTTTATTTGAGCCAACTGCAAGCGGCCGGAGTTCAACACAATCCCCATCATCCC
CACTACCCGATTTCGCATGCCCATCATCCATTCGCTCATTCGTTCAGTCATCCATTCTCA
ATAAGTCGCATCATGAACGTCAGTGATGGACAACAGCAGCAAAACAAGGAAATGCGCGCG
TACCACGAAGCGATGCAGTATGCTCAACATTATAATGTAGCTGCAAGTCACGTATCAAAT
CAAAATACCGGACATGTAATGGCATCTTTGGAACCCGTACCTCCTTCATCAACCCCCGAT
TCGTTGCACGGTTCCAATTCCTCGTCCATCTGTACGTCTGCTGGTATGTCAAGATTATCA
AGCTCTCCTTCGGAAAGTCAAGCGCATTTGACACACCAACAGCATCCATACTATCAAATG
CAATATCACATGGAATCTGAAGCAGGAATTCATCACGCTGCTGCAACTACCATGTCACAA
GTCGGATTGGAAGATGGCCTAAATGCTGCGTATTATCAAGGGTGCGTACAACCACATGGT
ACTAATGTCGCCATGGCTTAG
| Pfam |
Fork-head_N (IPR013638) - T[8-125] 5.0E-13 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[124-225] 8.0E-46 |
| SMART |
Fork_head_dom (IPR001766) - T[124-214] 8.5E-59 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[125-220] 2.76E-39 |
| Pfam |
Fork_head_dom (IPR001766) - T[126-210] 5.1E-37 |
| CDD |
Fork_head_dom (IPR001766) - T[126-203] 5.35272E-49 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[126-139] . |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[126-220] 37.5 |
| PRINTS |
Fork_head_dom (IPR001766) - T[126-139] 1.3E-23 - T[147-164] 1.3E-23 - T[170-187] 1.3E-23 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[170-176] . |
| Pfam |
Forkhead_box_C (IPR018533) - T[457-521] 3.4E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXA3_HUMAN | 79.487 % | 211 | 7.16E-63 |
| FOXA2_HUMAN | 80.645 % | 228 | 3.48E-68 |
| FOXA1_HUMAN | 61.497 % | 231 | 5.65E-69 |