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TRANSCRIPT CARD

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  1. Clone 'AHC0AAA220YJ10'
  2. Clone 'cstb005d17'
  3. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S31.g12599.02.t

Possible name(s)

PDIA4; PDIA5; TXNDC5

Location

S31 [413,949 / 417,101]

Sequences

Amino acid sequence

Length: 428

>Harore.CG.MTP2014.S31.g12599.02.p
MFRMKLISPVLLLFFSISAFGDDEGVVEEAEEDPYLYTEKNFDGRLDSESHFVMFYAPWC
GHCKRLIPVWQELADFYNSKTDRNVAIAKVDCTADAKICSDNAVTGYPTIKLFPIGKEPV
RFRGGRDLESLKDFVTKTLTNADEDEKEDKDVPPLEVNEGLYEISSENFDNHIASGNHFI
KFFAPWCGHCKKMEPAWKELAENFKNSDRVKIGNVDCTKNSESCKANEVRGYPTLLWFRD
GKKVEKYQGSRQLENFIEFTEKMLSSKAEEDEEQEEAGKQAEEQEQEPEPKGALELDADS
FKETIALGVSFVKFYAPWCGHCKRLAPTWDELSREDFSTINRPVRIVKVDCTKSQSLCAE
YEVRGYPTLKLFIEGEEKEKYSGARNLESLKEYLLRISGTDDQQKDELKFSLLPCILFWD
LLVQSDHL

Nucleotide sequence

Length: 1,347

>Harore.CG.MTP2014.S31.g12599.02.t
ATGTTCAGAATGAAGTTGATTAGTCCTGTGTTGCTTTTATTTTTTTCAATCTCCGCTTTC
GGTGATGACGAAGGGGTTGTGGAAGAAGCAGAGGAAGATCCTTACCTGTACACCGAGAAG
AATTTTGATGGACGATTGGACTCAGAGTCTCACTTTGTTATGTTTTATGCACCTTGGTGT
GGCCATTGCAAAAGACTCATACCAGTATGGCAGGAGTTAGCAGATTTTTACAATTCCAAG
ACAGATAGGAATGTTGCAATTGCAAAGGTGGATTGCACAGCTGATGCGAAAATTTGCTCG
GATAATGCAGTAACTGGTTATCCAACAATCAAGCTCTTTCCCATTGGAAAGGAACCTGTC
CGCTTCAGAGGAGGCCGTGACCTGGAATCCCTGAAAGATTTTGTTACAAAGACTTTAACA
AATGCAGATGAGGACGAAAAAGAAGATAAAGATGTGCCGCCTCTCGAGGTCAATGAAGGC
CTTTATGAAATTAGTTCAGAAAACTTTGATAACCACATTGCCAGCGGGAATCATTTCATA
AAATTTTTTGCTCCATGGTGTGGCCACTGCAAAAAAATGGAACCTGCATGGAAGGAACTG
GCAGAAAACTTCAAGAATAGTGACAGAGTGAAGATTGGGAATGTTGATTGTACCAAGAAT
TCAGAATCCTGTAAAGCCAACGAAGTTAGAGGTTACCCAACTTTATTGTGGTTTCGCGAC
GGAAAGAAAGTTGAAAAGTATCAGGGAAGCAGACAACTTGAGAACTTCATCGAGTTCACT
GAAAAAATGTTATCTTCCAAAGCCGAAGAAGATGAAGAACAGGAAGAAGCCGGAAAGCAA
GCGGAAGAACAAGAACAGGAGCCAGAACCTAAAGGTGCTTTGGAACTTGATGCTGATTCA
TTTAAAGAGACCATTGCATTGGGCGTAAGCTTCGTAAAGTTCTATGCACCATGGTGTGGA
CACTGCAAACGTTTGGCTCCAACTTGGGACGAACTTTCTCGTGAAGATTTCTCAACCATC
AACAGGCCTGTAAGAATAGTCAAGGTGGACTGCACCAAGTCTCAGTCTTTGTGTGCGGAA
TACGAGGTTCGAGGCTACCCTACACTAAAGCTCTTCATTGAAGGTGAAGAGAAAGAGAAA
TATTCTGGAGCACGTAACTTGGAAAGCCTGAAAGAATACTTATTGCGTATATCTGGTACA
GATGATCAGCAAAAAGATGAACTTAAATTTTCCCTGTTACCCTGTATATTATTCTGGGAC
CTGTTAGTGCAATCTGATCATCTTTGACATACCTTCAAACCCTCTCAAGATAATTTAAAC
ATCTCAAAATCAGTTGTTTCAGCATAG

InterProScan

ProSiteProfiles
Thioredoxin_domain (IPR013766) - T[8-140] 14.064 - T[146-265] 14.904 - T[275-399] 15.831
SUPERFAMILY
Thioredoxin-like_sf (IPR036249) - T[29-138] 3.21E-30 - T[153-264] 3.91E-34 - T[285-397] 1.3E-31
Pfam
Thioredoxin_domain (IPR013766) - T[37-137] 8.3E-26 - T[163-261] 1.2E-29 - T[295-394] 3.2E-28
ProSitePatterns
Thioredoxin_CS (IPR017937) - T[52-70] . - T[179-197] . - T[311-329] .
TIGRFAM
Disulphide_isomerase (IPR005788) - T[165-262] 8.3E-33

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TXND5_HUMAN 49.612 % 388 1.25E-132
PDIA6_HUMAN 34.146 % 139 8.89E-37
PDIA5_HUMAN 29.024 % 145 1.48E-38