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TRANSCRIPT CARD

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  1. Clone 'ma317n21'
  2. Transcript 'KH2012:KH.C1.1137.v1...'
  3. EST 'FF727068.1'
  4. Clone 'ciht001h06'
  5. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S321.g01619.04.t

Possible name(s)

SLCO4A1; SLCO4C1; SLCO5A1

Location

S321 [82,134 / 84,471]

Sequences

Amino acid sequence

Length: 324

>Harore.CG.MTP2014.S321.g01619.04.p
MSTRQSVSNNEMDSEEDREYEKCGVEIGCGKCRSKRHPITCFSFCNNAKGALLFLSFAAF
LQGFVINGLINVVISTIERRFQLRSSETGLVASMYDVATCICIPLVTYVGGHGNKPLWIG
WGIMIMGIGTIVFSMPHYFAPTYSITIGELDCIGNGTENCTEGIRAYRGFFIMSQILHGV
GAAPLYTLAITYLDENVTKNNSAMYQGVFYGFSLLGPGLGFLIGGAFLRLFTNLNENPGV
NDDSFAWVGAWWLGFIIAGIVTMFVSLPVLLYPQQLPGTDKVRVDREKEMHQSKAAAKVQ
GDENFGKRFEAFRTDFESNFIAID

Nucleotide sequence

Length: 975

>Harore.CG.MTP2014.S321.g01619.04.t
ATGTCGACGCGTCAGAGTGTCAGCAACAACGAAATGGACTCCGAAGAGGATAGAGAGTAT
GAAAAATGTGGAGTGGAAATTGGATGTGGCAAATGCAGGTCAAAAAGACACCCCATCACC
TGTTTTAGCTTTTGCAATAATGCTAAAGGTGCACTGCTGTTTCTCAGTTTCGCTGCATTC
CTACAAGGATTCGTTATAAACGGATTGATAAACGTGGTGATAAGCACAATTGAGAGAAGA
TTTCAATTGAGAAGTTCAGAAACCGGACTAGTCGCCAGTATGTACGACGTTGCAACTTGT
ATCTGTATACCCCTGGTAACATACGTAGGTGGTCACGGAAACAAACCACTGTGGATAGGA
TGGGGGATCATGATCATGGGAATTGGGACGATTGTATTTTCCATGCCGCACTATTTCGCA
CCAACGTATTCAATTACGATTGGAGAGCTCGACTGCATTGGGAACGGCACAGAGAATTGC
ACAGAAGGGATACGAGCGTACAGGGGCTTCTTTATAATGAGCCAAATCCTACACGGAGTT
GGAGCAGCACCATTATACACTTTGGCTATTACATACCTGGATGAGAACGTGACGAAAAAT
AACTCTGCCATGTATCAAGGTGTTTTTTACGGATTTTCCTTACTAGGACCCGGTCTTGGT
TTCTTGATTGGTGGTGCATTCCTTCGACTATTTACGAATCTGAATGAAAATCCTGGGGTG
AACGATGACAGTTTTGCGTGGGTCGGTGCATGGTGGCTCGGCTTCATAATTGCTGGAATC
GTAACTATGTTCGTCTCTTTGCCAGTACTGCTTTATCCTCAGCAACTACCGGGAACGGAT
AAGGTTCGTGTAGATCGGGAAAAGGAAATGCATCAAAGCAAAGCCGCTGCTAAAGTCCAG
GGGGATGAAAATTTTGGAAAAAGGTTCGAAGCTTTTAGAACGGATTTTGAATCAAATTTT
ATTGCCATCGACTAG

InterProScan

PANTHER
OATP (IPR004156) - T[14-308] 6.0E-92
SUPERFAMILY
MFS_trans_sf (IPR036259) - T[48-299] 1.96E-24
ProSiteProfiles
MFS_dom (IPR020846) - T[51-324] 14.525
Pfam
OATP (IPR004156) - T[52-300] 3.1E-78
CDD
MFS_dom (IPR020846) - T[52-273] 1.94475E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SO4A1_HUMAN 45.421 % 267 5.16E-84
SO4C1_HUMAN 34.982 % 189 1.88E-54
SO5A1_HUMAN 32.114 % 147 2.0E-39