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TRANSCRIPT CARD

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  1. Clone 'ciem846a09' > 
  2. Transcript 'KH2012:KH.C1.215.v2....' > 
  3. Clone 'cien86184' > 
  4. Transcript 'KH2012:KH.C5.143.v1....' > 
  5. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S321.g06252.01.t

Possible name(s)

IARS; IARS2; VARS

Gene model

Harore.CG.MTP2014.S321.g06252

Location

S321 [60,853 / 62,967]

Sequences

Amino acid sequence

Length: 334

>Harore.CG.MTP2014.S321.g06252.01.p
MSSFSETALVKKLAELNNSQQNIQTLSLWLIHHRKHAKTIIQVWQTELIKAKTGKKLTFL
YLANDILQNSKKKGPEFHKAFGGVLITAFTHVVKHADDKTKKSVSRILGIWEERGVFEQD
YVRQIKHAMAKVANTGSAPAKIHPQKPSEETESGKEPVKKKSRLDELLVEDEDEDYLTLS
PRDPPEAEELAKALLDLESAASTDAAVRERIASLPPEVQDISRLENITDVESAEKLSKIV
DEACLLLAEYNGRLVAEIEDRRQVARMLSDYIRQQKSLLQESEKKLEEYRAKLAKVAEVR
KDLKAHLQNLPDLTMLPSVTGGLAPLPSAGDLFN

Nucleotide sequence

Length: 1,585

>Harore.CG.MTP2014.S321.g06252.01.t
AATATTATTATTTTCTACAGCATGCTTTAATTCTATGTAATGATCTGATTTGTGATTGTG
CTTCAAGCTTTCCCTGGCATCATGTCCTCGTTCTCCGAAACAGCGCTGGTCAAAAAGCTA
GCTGAGTTGAACAATTCGCAGCAAAACATTCAGACACTCTCGCTGTGGTTGATTCATCAC
CGCAAGCATGCGAAGACAATCATACAGGTCTGGCAGACGGAACTCATCAAAGCTAAGACT
GGAAAAAAATTGACCTTCCTTTATTTGGCAAACGACATCCTTCAGAACTCGAAGAAAAAG
GGTCCAGAATTTCACAAGGCATTCGGAGGCGTTTTGATAACAGCATTTACACATGTAGTC
AAGCATGCTGATGATAAAACAAAGAAATCGGTCAGCAGAATACTAGGTATATGGGAAGAA
CGGGGAGTGTTTGAACAAGACTATGTTCGGCAAATCAAACATGCGATGGCAAAAGTTGCA
AATACCGGAAGTGCTCCGGCGAAAATTCATCCGCAGAAACCCTCTGAAGAAACCGAATCC
GGTAAAGAGCCGGTAAAAAAAAAGAGTCGTTTAGACGAATTACTCGTGGAAGACGAGGAT
GAGGATTACCTGACACTTTCTCCTAGAGATCCTCCAGAGGCTGAGGAACTAGCAAAGGCT
CTCTTGGATTTAGAATCTGCTGCGTCAACCGATGCGGCTGTGAGAGAAAGAATCGCAAGT
TTACCACCAGAAGTTCAAGATATTTCCAGATTGGAAAATATTACTGACGTAGAAAGTGCC
GAGAAGCTTTCGAAAATTGTGGACGAAGCTTGTTTACTACTGGCAGAATACAACGGCAGA
TTGGTAGCGGAAATAGAGGACAGGCGGCAAGTAGCGCGAATGCTCTCCGACTACATCCGA
CAGCAGAAGAGTCTTCTTCAAGAATCGGAGAAAAAATTAGAGGAATACCGAGCGAAGCTT
GCCAAGGTGGCCGAAGTTAGAAAAGACCTCAAGGCGCACTTACAAAACCTCCCCGATCTA
ACGATGCTGCCCAGCGTTACAGGGGGACTGGCACCTCTCCCTTCTGCCGGAGATCTGTTT
AACTGAACTGTGTGACTCGATTGTCGAGGACTATCTACTTGTCCATGGACATATATTGAG
TTGAGAATGGTACACTAATTTAATCTCTTAAGTTTAGCGTGATGCATTCCAAAATTGTAC
CGTACAATTAAAATCCGAAACGTGATGCAATCACCACCTGAAGACGGAAGTATTTCCTTT
TGACGGTATGGTATCGGTAATCCAATTTCCAGTCGACTCTTAACGTTACAAATTTTTAAC
TAAGTATTTTACGTAGGCAATTACTTTGCTTTCTTAACTATTAGCAATCCGTTCGTGTGA
TTCTGTTACCCCCTAGTGTAACCTGAGTCTGAAAATTCACAAGCAATATGATAGCAACAT
TATAATTGAGAATGAAGGTTTTAAACTAATATTTGAAAGGTAATCCAATATTGACTTTTC
ACAGATGTGGCAAGGGCCGGCAGTATCTGCCAGGAGTATTTTAATAAGTTCTTATAAGCT
AGTTTCGTGTTGTGCATTGCAAATG

InterProScan

ProSiteProfiles
CID_dom (IPR006569) - T[1-133] 48.425
Gene3D
ENTH_VHS (IPR008942) - T[1-133] 1.8E-41
SUPERFAMILY
ENTH_VHS (IPR008942) - T[3-132] 9.81E-27
SMART
CID_dom (IPR006569) - T[8-130] 2.9E-45
Pfam
RNA_pol_II-bd (IPR006903) - T[56-117] 6.2E-21
Pfam
CREPT (IPR032337) - T[188-334] 6.5E-58

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RPRD2_HUMAN 35.156 % 83.6 1.44E-17
RPR1A_HUMAN 53.731 % 352 1.08E-121
RPR1B_HUMAN 59.882 % 375 9.45E-131