- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Boleac.CG.SB_v3.S323...' >
- EST 'AHC0AAA236YA19_RM1' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S321.g06252.02.t
Possible name(s)
IARS; IARS2; VARS
Gene model
Location
S321 [56,602 / 62,949]
Amino acid sequence
Length: 1,278
>Harore.CG.MTP2014.S321.g06252.02.p
VCYIENREMVEAVPERINFPEEEEKTLKFWEDNDTFHASLKMSKDKPKYAFFDGPPFATG
LPHYGHILAGTIKDIVTRYAHQSGYYVERRFGWDCHGLPVEYEIDKTFGFKGPEDVLKYG
IGEYNKQCRAIVMRYADDWEYIVKRMGRWIDFKNDYKTLYSTFMESVWWVFKQLFDKGFV
YKGFKVMPYSTGCNTPLSNFEASQNYKDVIDPAVIVSFPLLEDPNVKLIAWTTTPWTLPS
NLAVCVHPTMIYVKVRDVTTNQVYILMEARLIALYKKEEEYEILERFEGKTLDGKKYLPL
FNYFSHLKEAFRVTCDTYVTDDSGTGMVHQAPFFGADDYRVSIANGIIKKDGDPVCPVDA
SGKFTEEVKDFAGIYVKDADKLICWHLKQNGRLVHQSTTKHNYPFCWRSETPLLYKAVPS
WFIRVEHMTDKLLKNNEKSYWVPEFVKEKRFANWLRDAHDWAVSRNRYWGTPIPLWVSDD
MEEVICVGSIDELYRLSGVKVTDLHREYIDHITIPSQTGKGILRRVSEVFDCWFESGSMP
YAQKHYPFENKKEFEDTFPANFIAEGIDQTRGWFYTLLVLSTALFDRPPFQNLIVNGLVL
ASDGQKMSKKKKNYPDPLNVVHAYGADALRLYLINSPVVRAENLRFQESGVRDILKDVFL
PWFNAYRFFIQNVIRYNKEEKGEFQYDQSALGNSDNIMDRWILSYVQSLTQFVKKEMAAY
HLYTVVPKLVKFIDVLTNWYVRSNRKRFKGEGGEEDCQKALQTLCSVLFTMIRLMSPFTP
FLSEYMYQNLKHVLSDKDSALSSIHFMMLPEANEKLIDKAIEKAVTRMQAVIELGRVIRD
RKTLPIKYPLREIVVIHNDPEYLEDVKSLVHYVKEELNVRELTTSTDKEKYGVILCARPD
HFLLGKRLKAAFKAVTTGIHKLTSEQIEGYQQTGKIEVCGHELGEGDLRIHYQFTSDSDG
QSKSKYEAHSDNDVLVLLDVTPDQSLLDEGVAREIVNRIQKLRKKAQMVPTDEVTVYFDD
SNSSSYLSDLVKSHAEYITSTIKSPFFVGPVPVSAEVIIEDSNDLKGSSFGLALAKGHLH
VGDTDQSKPVCKYVNVSLSYNDIYSGDATVVLENPKGCPVISGLRQFKSALCKLYSPDKA
TTVISNGENGSFEPANGEVITVNIRKKDQVPGVLLDGIFSLDHSRVTVYHNFEGIIKNPT
SAFVNVKFLGKSTQAVGTIFLENPAGGNRIRYEDFVGECASLFNSRNRTVLLFEDSKCTK
PVTNLDGLNNATIFATAK
Nucleotide sequence
Length: 5,818
>Harore.CG.MTP2014.S321.g06252.02.t
AGCATGCTTTAATTCTATGTAATGATCTGATTTGTGATTGTGCTTCAAGCTTTCCCTGGC
ATCATGTCCTCGTTCTCCGAAACAGCGCTGGTCAAAAAGCTAGCTGAGTTGAACAATTCG
CAGCAAAACATTCAGACACTCTCGCTGTGGTTGATTCATCACCGCAAGCATGCGAAGACA
ATCATACAGGTCTGGCAGACGGAACTCATCAAAGCTAAGACTGGAAAAAAATTGACCTTC
CTTTATTTGGCAAACGACATCCTTCAGAACTCGAAGAAAAAGGGTCCAGAATTTCACAAG
GCATTCGGAGGCGTTTTGATAACAGCATTTACACATGTAGTCAAGCATGCTGATGATAAA
ACAAAGAAATCGGTCAGCAGAATACTAGGTATATGGGAAGAACGGGGAGTGTTTGAACAA
GACTATGTTCGGCAAATCAAACATGCGATGGCAAAAGTTGCAAATACCGGAAGTGCTCCG
GCGAAAATTCATCCGCAGAAACCCTCTGAAGAAACCGAATCCGGTAAAGAGCCGGTAAAA
AAAAAGAGTCGTTTAGACGAATTACTCGTGGAAGACGAGGATGAGGATTACCTGACACTT
TCTCCTAGAGATCCTCCAGAGGCTGAGGAACTAGCAAAGGCTCTCTTGGATTTAGAATCT
GCTGCGTCAACCGATGCGGCTGTGAGAGAAAGAATCGCAAGTTTACCACCAGAAGTTCAA
GATATTTCCAGATTGGAAAATATTACTGACGTAGAAAGTGCCGAGAAGCTTTCGAAAATT
GTGGACGAAGCTTGTTTACTACTGGCAGAATACAACGGCAGATTGGTAGCGGAAATAGAG
GACAGGCGGCAAGTAGCGCGAATGCTCTCCGACTACATCCGACAGCAGAAGAGTCTTCTT
CAAGAATCGGAGAAAAAATTAGAGGAATACCGAGCGAAGCTTGCCAAGGTGGCCGAAGTT
AGAAAAGACCTCAAGGCGCACTTACAAAACCTCCCCGATCTAACGATGCTGCCCAGCGTT
ACAGGGGGACTGGCACCTCTCCCTTCTGCCGGAGATCTGTTTAACTGAACTGTGTGACTC
GATTGTCGAGGACTATCTACTTGTCCATGGACATATATTGAGTTGAGAATGGTACACTAA
TTTAATCTCTTAAGTTTAGCGTGATGCATTCCAAAATTGTACCGTACAATTAAAATCCGA
AACGTGATGCAATCACCACCTGAAGACGGAAGTATTTCCTTTTGACGGTATGGTATCGGT
AATCCAATTTCCAGTCGACTCTTAACGTTACAAATTTTTAACTAAGTATTTTACGTAGGC
AATTACTTTGCTTTCTTAACTATTAGCAATCCGTTCGTGTGATTCTGTTACCCCCTAGTG
TAACCTGAGTCTGAAAATTCACAAGCAATATGATAGCAACATTATAATTGAGAATGAAGG
TTTTAAACTAATATTTGAAAGGTAATCCAATATTGACTTTTCACAGATGTGGCAAGGGCC
GGCAGTATCTGCCAGGAGTATTTTAATAAGTTCTTATAAGCTAGTTTCGTGTTGTGCATT
GCAAATGTGAATTATTATACGAATACAGCGCTTGAGAGTCAGCTGTGTACAAATGAACAA
TCTTACCATTATCGTGTCGAATTCCTCAGCGTTGCTGTCAACTTTGTAATAAATTACTCG
CTAGTTATACAGTGCAGTTATATTAATTCTGTATGAAGCCTCATATATATGAATCTCACT
TTAGATTTCCTTTGCAATACTGAATCCAGGTAGTGTTCTCTCCCAAAGATGGTTTATTTC
ACACAAATACTATGGAACACCAATTAAATTTGACTACCGTGCATTCAGTTGCGATGGAAC
TACTAATGAGCGAATTTCAACACACAATGCAACAATGATATCTGAACATATACGAAAACA
ATTGATGCAGAAAACTTTGGCTAAAGTTCAACATTGAAAAGTTGCGATATATCGAAATGA
CTACTTTGCTGTGGCGAAAATGGTTGCATTGTTCAATCCGTCCAGATTGGTCACCGGTTT
CGTGCATTTGGAATCCTCAAAAAGTAGGACGGTGCGATTCCTCGAGTTGAACAGTGACGC
GCACTCACCGACGAAATCTTCGTAACGGATCCGGTTCCCCCCAGCTGGATTTTCGAGAAA
TATTGTTCCGACGGCTTGCGTACTCTTACCGAGGAACTTCACATTCACGAAAGCGCTCGT
GGGATTTTTAATGATCCCTTCAAAATTGTGGTAGACCGTAACTCTCGAGTGGTCCAAAGA
AAAGATTCCGTCGAGCAAAACACCAGGCACCTGATCCTTCTTCCTGATATTGACGGTGAT
GACTTCACCGTTCGCTGGCTCGAAACTCCCATTTTCTCCGTTGGAAATTACCGTAGTTGC
TTTGTCGGGCGAATATAATTTGCAGAGGGCTGATTTGAATTGCCTGAGACCAGAAATGAC
TGGGCAACCTTTAGGATTTTCCAGGACGACAGTAGCATCTCCGCTGTATATGTCATTGTA
AGATAACGAAACATTGACGTATTTGCAAACAGGCTTCGATTGATCCGTGTCTCCTACATG
AAGATGTCCTTTAGCTAAAGCGAGACCAAAAGAACTTCCTTTCAGATCATTACTGTCTTC
GATAATGACTTCAGCTGAAACAGGAACAGGGCCGACGAAGAACGGCGACTTGATGGTCGA
TGTTATGTATTCGGCATGAGATTTGACCAAATCAGACAAATACGAGGAAGAATTGGAGTC
GTCAAAATAAACCGTTACTTCATCGGTCGGTACCATCTGGGCTTTCTTCCTCAGTTTCTG
TATGCGATTCACAATTTCTCGAGCGACACCTTCGTCCAGCAAGCTTTGATCCGGAGTAAC
GTCCAATAGAACGAGGACATCATTGTCAGAATGAGCTTCGTATTTGGATTTCGATTGCCC
GTCGGAGTCCGAGGTAAACTGATAATGGATTCGTAAGTCTCCCTCCCCGAGTTCGTGTCC
ACATACTTCTATTTTACCCGTCTGCTGGTATCCTTCGATCTGTTCGCTCGTAAGCTTGTG
GATTCCGGTAGTGACGGCTTTGAATGCTGCTTTCAGTCGTTTTCCCAGTAGGAAATGGTC
AGGACGAGCACACAGAATCACTCCATACTTTTCCTTATCGGTCGAAGTGGTCAGCTCCCG
CACATTGAGTTCCTCCTTGACGTAATGAACCAGGCTTTTCACATCTTCCAGATATTCCGG
ATCATTGTGTATGACAACAATCTCTCTCAAGGGGTACTTGATGGGTAACGTTTTACGATC
ACGTATGACTCGTCCGAGTTCGATCACAGCTTGCATGCGTGTGACTGCCTTTTCAATAGC
CTTGTCGATGAGCTTCTCGTTGGCTTCGGGGAGCATCATGAAGTGGATGCTGGACAGGGC
ACTATCCTTATCGCTCAGCACATGCTTCAGGTTCTGGTACATGTACTCGGAGAGGAACGG
GGTGAACGGGCTCATTAAGCGTATCATGGTGAAGAGAACACTGCATAGTGTTTGAAGTGC
TTTTTGACAATCCTCTTCGCCTCCTTCTCCCTTGAATCTCTTCCTGTTGGAACGCACGTA
CCAGTTGGTGAGCACGTCTATAAACTTTACCAGTTTAGGTACGACAGTGTAGAGATGATA
AGCAGCCATTTCCTTCTTCACGAACTGAGTGAGGGACTGAACATATGACAATATCCATCT
ATCCATTATGTTGTCAGAATTACCTAAAGCACTCTGATCGTACTGGAATTCCCCCTTCTC
TTCCTTGTTGTATCTGATGACGTTCTGAATGAAGAAGCGATAAGCGTTGAACCACGGTAA
GAACACGTCCTTCAAGATGTCACGGACTCCGCTTTCCTGGAAACGGAGGTTTTCCGCACG
TACCACCGGAGAATTGATCAAATACAATCGGAGCGCGTCTGCCCCGTAAGCGTGGACAAC
GTTCAAGGGATCCGGATAATTTTTCTTCTTCTTGCTCATTTTCTGTCCGTCGCTAGCAAG
AACCAGACCATTTACTATCAGGTTTTGGAAAGGAGGCCGATCGAACAAAGCCGTCGAAAG
CACGAGCAGAGTATAAAACCAGCCACGTGTCTGGTCTATTCCTTCGGCGATGAAATTAGC
AGGAAAGGTGTCTTCGAATTCCTTTTTGTTCTCGAACGGATAATGCTTCTGGGCATACGG
CATGGATCCACTCTCGAACCAGCAATCAAATACTTCAGACACGCGACGAAGAATGCCTTT
GCCAGTTTGCGAAGGAATAGTGATGTGATCGATGTATTCCCTATGTAAATCCGTGACTTT
CACGCCGGACAATCGATACAATTCATCTATGGATCCGACACAGATGACTTCTTCCATATC
GTCGCTTACCCACAAGGGTATCGGTGTACCCCAGTACCTGTTCCTGCTTACAGCCCAATC
ATGTGCGTCCCTCAGCCAGTTTGCAAATCGTTTTTCTTTCACAAATTCAGGCACCCAGTA
TGATTTCTCATTGTTCTTCAGCAGTTTATCCGTCATGTGTTCCACCCTGATGAACCAACT
GGGTACGGCTTTGTACAGCAACGGGGTTTCCGAGCGCCAGCAGAATGGGTAGTTATGCTT
GGTCGTGCTTTGATGAACCAATCGTCCGTTTTGTTTCAGATGCCAACAGATCAATTTGTC
TGCATCTTTGACATAAATCCCAGCAAAATCTTTGACCTCCTCTGTGAACTTACCACTTGC
GTCCACCGGGCAGACGGGGTCTCCATCCTTTTTGATGATGCCGTTGGCGATGCTCACCCG
ATAATCGTCTGCACCAAAGAACGGAGCCTGGTGGACCATGCCAGTGCCGCTGTCGTCAGT
GACGTACGTGTCGCAGGTCACACGGAATGCTTCTTTGAGATGAGAGAAATAGTTGAACAG
TGGCAGATATTTTTTTCCGTCCAATGTTTTGCCTTCAAATCTCTCTAGAATTTCATATTC
TTCTTCTTTCTTGTAAAGAGCGATGAGACGAGCTTCCATCAGAATGTAAACCTGGTTTGT
TGTGACATCCCTCACTTTGACGTAGATCATAGTAGGGTGGACGCAAACTGCCAGGTTGCT
CGGCAATGTCCAGGGCGTCGTGGTCCAGGCGATCAGTTTGACGTTAGGATCTTCCAGCAG
CGGAAAACTCACAATCACCGCTGGATCAATGACGTCTTTGTAGTTTTGGCTCGCCTCGAA
ATTCGACAACGGTGTGTTGCATCCGGTTGAATATGGCATCACCTTAAATCCTTTGTAGAC
GAACCCTTTGTCGAAGAGTTGCTTGAAAACCCACCACACGCTTTCCATAAATGTACTGTA
CAGTGTTTTGTAATCGTTTTTGAAGTCAATCCAGCGACCCATTCGTTTGACAATGTATTC
CCAGTCGTCGGCATATCTCATCACTATAGCCCTGCACTGCTTATTGTATTCCCCGATACC
ATACTTTAGCACATCTTCAGGACCTTTAAAACCGAACGTTTTGTCGATTTCGTATTCTAC
CGGCAATCCATGACAGTCCCAGCCAAATCTACGCTCCACGTAGTAGCCGCTCTGGTGAGC
GTACCGTGTGACGATGTCTTTGATCGTCCCGGCCAAGATGTGACCGTAGTGAGGCAGTCC
CGTTGCGAACGGCGGTCCGTCAAAGAAGGCGTATTTCGGCTTGTCTTTGGACATCTTTAA
AGAGGCATGGAAGGTGTCATTGTCTTCCCAAAATTTAAGCGTTTTTTCTTCCTCTTCGGG
AAAGTTAATACGCTCAGGAACAGCTTCAACCATCTCGCGATTTTCGATATAACAAACT
| Hamap |
Ile-tRNA-ligase_type2 (IPR023586) - T[11-1066] 12.846 |
| TIGRFAM |
Ile-tRNA-ligase (IPR002301) - T[13-865] 2.9E-283 |
| Gene3D |
Rossmann-like_a/b/a_fold (IPR014729) - T[23-204] 1.1E-233 - T[408-632] 1.1E-233 |
| Pfam |
aa-tRNA-synth_Ia (IPR002300) - T[26-644] 1.7E-231 |
| PRINTS |
Ile-tRNA-ligase (IPR002301) - T[49-60] 5.7E-30 - T[229-252] 5.7E-30 - T[401-416] 5.7E-30 - T[525-538] 5.7E-30 - T[565-574] 5.7E-30 |
| ProSitePatterns |
aa-tRNA-synth_I_CS (IPR001412) - T[56-67] . |
| Gene3D |
Val/Leu/Ile-tRNA-synth_edit (IPR009008) - T[205-407] 1.1E-233 |
| SUPERFAMILY |
Val/Leu/Ile-tRNA-synth_edit (IPR009008) - T[208-403] 7.85E-46 |
| CDD |
Anticodon_Ile_ABEc (IPR033709) - T[646-836] 2.35319E-89 |
| SUPERFAMILY |
tRNAsynth_Ia_anticodon-bd (IPR009080) - T[662-913] 1.29E-47 |
| Pfam |
M/V/L/I-tRNA-synth_anticd-bd (IPR013155) - T[699-851] 2.9E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SYIM_HUMAN | 27.193 % | 257 | 1.19E-70 |
| SYIC_HUMAN | 60.42 % | 1601 | 0 |
| SYVC_HUMAN | 22.449 % | 159 | 2.36E-39 |